BLASTX nr result

ID: Coptis24_contig00015544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015544
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18365.3| unnamed protein product [Vitis vinifera]              203   1e-50
ref|XP_002270034.1| PREDICTED: uncharacterized protein LOC100241...   203   1e-50
ref|XP_002884937.1| hypothetical protein ARALYDRAFT_318072 [Arab...   192   2e-47
ref|NP_187906.2| uncharacterized protein [Arabidopsis thaliana] ...   191   5e-47
ref|NP_974297.1| uncharacterized protein [Arabidopsis thaliana] ...   191   5e-47

>emb|CBI18365.3| unnamed protein product [Vitis vinifera]
          Length = 629

 Score =  203 bits (517), Expect = 1e-50
 Identities = 104/137 (75%), Positives = 115/137 (83%)
 Frame = +3

Query: 9   DASLWSLYDWSAVSSKVHSPQRVMKSVSNVLGTGNACDPYKVRGKLSWADIGGYKLATEI 188
           ++SLWS  + S +SS V SPQ  +K  S VL T N CDPYKVRGKLSWADIG Y LATE+
Sbjct: 320 NSSLWSSSERSIISSWVQSPQVDVKGHSEVLATENVCDPYKVRGKLSWADIGTYGLATEV 379

Query: 189 SGISVGKKQLEYASGALRTYRSLVEQLAKVNFIDLRCKEKLAFWINLYNALIMHAYLAYG 368
           S +SVGKKQLEYASGALR +R+LVEQLAKVN I L C EKLAFWINLYNALIMHAYLAYG
Sbjct: 380 SWMSVGKKQLEYASGALRRFRTLVEQLAKVNPIQLNCNEKLAFWINLYNALIMHAYLAYG 439

Query: 369 VPQSELKLFSLMQKAAY 419
           VP+S+LKLFSLMQKAAY
Sbjct: 440 VPRSDLKLFSLMQKAAY 456


>ref|XP_002270034.1| PREDICTED: uncharacterized protein LOC100241082 [Vitis vinifera]
          Length = 566

 Score =  203 bits (517), Expect = 1e-50
 Identities = 104/137 (75%), Positives = 115/137 (83%)
 Frame = +3

Query: 9   DASLWSLYDWSAVSSKVHSPQRVMKSVSNVLGTGNACDPYKVRGKLSWADIGGYKLATEI 188
           ++SLWS  + S +SS V SPQ  +K  S VL T N CDPYKVRGKLSWADIG Y LATE+
Sbjct: 257 NSSLWSSSERSIISSWVQSPQVDVKGHSEVLATENVCDPYKVRGKLSWADIGTYGLATEV 316

Query: 189 SGISVGKKQLEYASGALRTYRSLVEQLAKVNFIDLRCKEKLAFWINLYNALIMHAYLAYG 368
           S +SVGKKQLEYASGALR +R+LVEQLAKVN I L C EKLAFWINLYNALIMHAYLAYG
Sbjct: 317 SWMSVGKKQLEYASGALRRFRTLVEQLAKVNPIQLNCNEKLAFWINLYNALIMHAYLAYG 376

Query: 369 VPQSELKLFSLMQKAAY 419
           VP+S+LKLFSLMQKAAY
Sbjct: 377 VPRSDLKLFSLMQKAAY 393


>ref|XP_002884937.1| hypothetical protein ARALYDRAFT_318072 [Arabidopsis lyrata subsp.
           lyrata] gi|297330777|gb|EFH61196.1| hypothetical protein
           ARALYDRAFT_318072 [Arabidopsis lyrata subsp. lyrata]
          Length = 582

 Score =  192 bits (488), Expect = 2e-47
 Identities = 97/136 (71%), Positives = 114/136 (83%)
 Frame = +3

Query: 12  ASLWSLYDWSAVSSKVHSPQRVMKSVSNVLGTGNACDPYKVRGKLSWADIGGYKLATEIS 191
           AS W   + S +SS V SPQ  +++ +NVL TG+  DPY+VRGKLSWA+IG Y LA+E+S
Sbjct: 273 ASWWPSTERSMISSWVQSPQIDIQNNANVLATGDVFDPYRVRGKLSWAEIGSYSLASEVS 332

Query: 192 GISVGKKQLEYASGALRTYRSLVEQLAKVNFIDLRCKEKLAFWINLYNALIMHAYLAYGV 371
            +SVGKKQLEYASGALR +R+LVEQLA+VN I L C EKLAFWINLYNALIMHAYLAYGV
Sbjct: 333 WMSVGKKQLEYASGALRKFRTLVEQLARVNPIHLSCNEKLAFWINLYNALIMHAYLAYGV 392

Query: 372 PQSELKLFSLMQKAAY 419
           P+S+LKLFSLMQKAAY
Sbjct: 393 PKSDLKLFSLMQKAAY 408


>ref|NP_187906.2| uncharacterized protein [Arabidopsis thaliana]
           gi|15795132|dbj|BAB02510.1| unnamed protein product
           [Arabidopsis thaliana] gi|20260518|gb|AAM13157.1|
           unknown protein [Arabidopsis thaliana]
           gi|31711976|gb|AAP68344.1| At3g13000 [Arabidopsis
           thaliana] gi|332641754|gb|AEE75275.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 553

 Score =  191 bits (485), Expect = 5e-47
 Identities = 96/136 (70%), Positives = 114/136 (83%)
 Frame = +3

Query: 12  ASLWSLYDWSAVSSKVHSPQRVMKSVSNVLGTGNACDPYKVRGKLSWADIGGYKLATEIS 191
           AS W   + S +SS V SPQ  +++ +NVL TG+  DPY+VRGKLSWA+IG Y LA+E+S
Sbjct: 244 ASWWPSTERSMISSWVQSPQIDIQNNANVLATGDVFDPYRVRGKLSWAEIGNYSLASEVS 303

Query: 192 GISVGKKQLEYASGALRTYRSLVEQLAKVNFIDLRCKEKLAFWINLYNALIMHAYLAYGV 371
            +SVGKKQLEYASGAL+ +R+LVEQLA+VN I L C EKLAFWINLYNALIMHAYLAYGV
Sbjct: 304 WMSVGKKQLEYASGALKKFRTLVEQLARVNPIHLSCNEKLAFWINLYNALIMHAYLAYGV 363

Query: 372 PQSELKLFSLMQKAAY 419
           P+S+LKLFSLMQKAAY
Sbjct: 364 PKSDLKLFSLMQKAAY 379


>ref|NP_974297.1| uncharacterized protein [Arabidopsis thaliana]
           gi|62321660|dbj|BAD95282.1| hypothetical protein
           [Arabidopsis thaliana] gi|222424421|dbj|BAH20166.1|
           AT3G13000 [Arabidopsis thaliana]
           gi|332641753|gb|AEE75274.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 582

 Score =  191 bits (485), Expect = 5e-47
 Identities = 96/136 (70%), Positives = 114/136 (83%)
 Frame = +3

Query: 12  ASLWSLYDWSAVSSKVHSPQRVMKSVSNVLGTGNACDPYKVRGKLSWADIGGYKLATEIS 191
           AS W   + S +SS V SPQ  +++ +NVL TG+  DPY+VRGKLSWA+IG Y LA+E+S
Sbjct: 273 ASWWPSTERSMISSWVQSPQIDIQNNANVLATGDVFDPYRVRGKLSWAEIGNYSLASEVS 332

Query: 192 GISVGKKQLEYASGALRTYRSLVEQLAKVNFIDLRCKEKLAFWINLYNALIMHAYLAYGV 371
            +SVGKKQLEYASGAL+ +R+LVEQLA+VN I L C EKLAFWINLYNALIMHAYLAYGV
Sbjct: 333 WMSVGKKQLEYASGALKKFRTLVEQLARVNPIHLSCNEKLAFWINLYNALIMHAYLAYGV 392

Query: 372 PQSELKLFSLMQKAAY 419
           P+S+LKLFSLMQKAAY
Sbjct: 393 PKSDLKLFSLMQKAAY 408


Top