BLASTX nr result

ID: Coptis24_contig00015542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015542
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68838.1| hypothetical protein VITISV_030956 [Vitis vinifera]    76   2e-17
emb|CAN83313.1| hypothetical protein VITISV_001463 [Vitis vinifera]    76   5e-17
emb|CAN65484.1| hypothetical protein VITISV_029474 [Vitis vinifera]    75   8e-17
emb|CAN68153.1| hypothetical protein VITISV_009302 [Vitis vinifera]    75   8e-17
emb|CAN79624.1| hypothetical protein VITISV_035898 [Vitis vinifera]    70   3e-16

>emb|CAN68838.1| hypothetical protein VITISV_030956 [Vitis vinifera]
          Length = 1881

 Score = 76.3 bits (186), Expect(2) = 2e-17
 Identities = 31/54 (57%), Positives = 40/54 (74%)
 Frame = -1

Query: 166  WCIGGDFNVLRLSSDRRGGCHIDSRMVSFDDFITRCELLDLPLKGGQFTWSSRQ 5
            WC+GGDFNV+R SS++ GG  +   M  FDDFI+ CEL+DLPL+   FTWS+ Q
Sbjct: 964  WCVGGDFNVIRRSSEKLGGSRLTPSMKDFDDFISDCELIDLPLRSASFTWSNMQ 1017



 Score = 37.7 bits (86), Expect(2) = 2e-17
 Identities = 20/62 (32%), Positives = 32/62 (51%)
 Frame = -2

Query: 465  LLAVDTRGGVCILWDKGKVEVFETAVGTFTVSVICLFRGEITRKVVTGVYGPSNGLNIQE 286
            L A    GG+ I+WD  K+   E  +G+F+VS+     G      ++ VYGP+N    ++
Sbjct: 890  LPACGASGGILIIWDTKKLSREEVMLGSFSVSIKFTLNG-CESLWLSAVYGPNNSALRKD 948

Query: 285  FW 280
             W
Sbjct: 949  LW 950


>emb|CAN83313.1| hypothetical protein VITISV_001463 [Vitis vinifera]
          Length = 1780

 Score = 76.3 bits (186), Expect(2) = 5e-17
 Identities = 33/59 (55%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
 Frame = -1

Query: 175  SYP-WCIGGDFNVLRLSSDRRGGCHIDSRMVSFDDFITRCELLDLPLKGGQFTWSSRQD 2
            +YP WC+GGDFNV+R SS + GG  +   M  FDDFI  CEL+DLPL+   FTWS+ Q+
Sbjct: 883  AYPRWCVGGDFNVIRRSSKKLGGSRLTPSMKDFDDFIRDCELIDLPLRSASFTWSNMQE 941



 Score = 36.2 bits (82), Expect(2) = 5e-17
 Identities = 20/62 (32%), Positives = 33/62 (53%)
 Frame = -2

Query: 465 LLAVDTRGGVCILWDKGKVEVFETAVGTFTVSVICLFRGEITRKVVTGVYGPSNGLNIQE 286
           L A    GG+ I+W+  K+   E  +G+F+VS+     G      ++ VYGP+N    ++
Sbjct: 813 LPASGASGGILIIWEAKKLCREEVVLGSFSVSIKFALDG-CESLWLSAVYGPNNSTLRKD 871

Query: 285 FW 280
           FW
Sbjct: 872 FW 873


>emb|CAN65484.1| hypothetical protein VITISV_029474 [Vitis vinifera]
          Length = 1882

 Score = 74.7 bits (182), Expect(2) = 8e-17
 Identities = 31/54 (57%), Positives = 39/54 (72%)
 Frame = -1

Query: 166 WCIGGDFNVLRLSSDRRGGCHIDSRMVSFDDFITRCELLDLPLKGGQFTWSSRQ 5
           WC+GGDFNV+R SS++ GG      M  FDDFI+ CEL+DLPL+   FTWS+ Q
Sbjct: 798 WCVGGDFNVIRRSSEKLGGSRXTPSMKXFDDFISDCELIDLPLRSASFTWSNMQ 851



 Score = 37.0 bits (84), Expect(2) = 8e-17
 Identities = 20/62 (32%), Positives = 32/62 (51%)
 Frame = -2

Query: 465 LLAVDTRGGVCILWDKGKVEVFETAVGTFTVSVICLFRGEITRKVVTGVYGPSNGLNIQE 286
           L A    GG+ I+WD  K+   E  +G+F+VS+     G      ++ VYGP+     ++
Sbjct: 724 LPACGASGGILIIWDAKKLSREEVVLGSFSVSIKFALNG-CESLWLSAVYGPNISALRKD 782

Query: 285 FW 280
           FW
Sbjct: 783 FW 784


>emb|CAN68153.1| hypothetical protein VITISV_009302 [Vitis vinifera]
          Length = 1323

 Score = 74.7 bits (182), Expect(2) = 8e-17
 Identities = 34/62 (54%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
 Frame = -1

Query: 184 FWESYP-WCIGGDFNVLRLSSDRRGGCHIDSRMVSFDDFITRCELLDLPLKGGQFTWSSR 8
           F  S+P WC+GGDFNV+R SS++ GG  + S M  FD FI  CELLD PL+   FTWS+ 
Sbjct: 419 FGLSFPLWCVGGDFNVIRRSSEKLGGSSLTSSMKDFDSFIRECELLDPPLQNASFTWSNL 478

Query: 7   QD 2
           Q+
Sbjct: 479 QE 480



 Score = 37.0 bits (84), Expect(2) = 8e-17
 Identities = 20/62 (32%), Positives = 33/62 (53%)
 Frame = -2

Query: 465 LLAVDTRGGVCILWDKGKVEVFETAVGTFTVSVICLFRGEITRKVVTGVYGPSNGLNIQE 286
           L A    GG+ I+WD  K+   E  +G+F+VS+     G      ++ VYGP++    ++
Sbjct: 352 LPACGALGGILIIWDSKKLRSEEVLIGSFSVSIKFALDG-CRPLWISTVYGPNSPSLRKD 410

Query: 285 FW 280
           FW
Sbjct: 411 FW 412


>emb|CAN79624.1| hypothetical protein VITISV_035898 [Vitis vinifera]
          Length = 1587

 Score = 69.7 bits (169), Expect(2) = 3e-16
 Identities = 30/58 (51%), Positives = 38/58 (65%)
 Frame = -1

Query: 175 SYPWCIGGDFNVLRLSSDRRGGCHIDSRMVSFDDFITRCELLDLPLKGGQFTWSSRQD 2
           S  WC+GGDFNV+  SS + GG  +   M  FDDFI  CEL+D PL+   FTWS+ Q+
Sbjct: 640 SXRWCVGGDFNVIXRSSKKLGGSRLTPSMKDFDDFIRDCELIDSPLRXAPFTWSNLQE 697



 Score = 40.0 bits (92), Expect(2) = 3e-16
 Identities = 22/62 (35%), Positives = 33/62 (53%)
 Frame = -2

Query: 465 LLAVDTRGGVCILWDKGKVEVFETAVGTFTVSVICLFRGEITRKVVTGVYGPSNGLNIQE 286
           L A    GG+ I+WD  K+   E  +G+F+VS+     G      ++ VYGPSN    ++
Sbjct: 569 LPASGASGGILIIWDSKKLRREEVVLGSFSVSIKFALDG-CEPFWLSAVYGPSNSALRKD 627

Query: 285 FW 280
           FW
Sbjct: 628 FW 629


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