BLASTX nr result

ID: Coptis24_contig00015519 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015519
         (943 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65705.1| hypothetical protein VITISV_001744 [Vitis vinifera]    85   3e-14
ref|XP_003570913.1| PREDICTED: uncharacterized protein LOC100845...    78   3e-12
dbj|BAK00941.1| predicted protein [Hordeum vulgare subsp. vulgare]     75   2e-11
gb|ABI15899.1| marker Xucw84 [Triticum dicoccoides]                    73   9e-11
ref|NP_001045836.1| Os02g0138200 [Oryza sativa Japonica Group] g...    70   6e-10

>emb|CAN65705.1| hypothetical protein VITISV_001744 [Vitis vinifera]
          Length = 654

 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 66/187 (35%), Positives = 85/187 (45%), Gaps = 7/187 (3%)
 Frame = -2

Query: 936  EAQPAEVLANAPVTTGGHLWSQKSSWKELVGEMGNSSFSISNIVPDIASKRQNAQNHFST 757
            EAQP         +  G  W QKSSW +LV E   SSFSIS I+P I  ++Q        
Sbjct: 460  EAQPPIPDGVVKSSGRGASWLQKSSWTQLVSEANTSSFSISQILPGIPFEKQKLPKFSDV 519

Query: 756  GIAGAFHNKRENSTKQVTSEV--PVNESNNVGKHTILHDKLSSPSAKEEKTSASLDGESD 583
             +A +  +K  +  K  TSE     NE   VGK           +  EE     LD E  
Sbjct: 520  DLAVSSGSKHHDQVKPHTSETIRDGNEKLEVGKGFTTTSSSDMVALDEEHNFVDLDVEKS 579

Query: 582  K----VEMNSENSKIDNTVRSK-SMGSNASNNKAPMKIVISEVCPFMRSNDSEKEWIKTR 418
                 V+M   N     T+R K  +G   ++ K    + I E C FMR+  S KEW KT+
Sbjct: 580  TPEKGVQMIGNNEVSARTLRKKPHIGPKQTSIK---DVKIGETCSFMRTAASVKEWSKTK 636

Query: 417  AALSGAL 397
            AALSG+L
Sbjct: 637  AALSGSL 643


>ref|XP_003570913.1| PREDICTED: uncharacterized protein LOC100845300 [Brachypodium
           distachyon]
          Length = 585

 Score = 78.2 bits (191), Expect = 3e-12
 Identities = 60/184 (32%), Positives = 93/184 (50%), Gaps = 12/184 (6%)
 Frame = -2

Query: 918 VLANAPVTTGGHLWSQKSSWKELVGEMGNSSFSISNIVPDIASKRQNAQNHFSTGIAGAF 739
           V+A+ P    G +W+QKS+W++LVG MG +SFS+S ++P+        QN   + ++   
Sbjct: 402 VIASEPKK--GSIWTQKSAWRDLVGGMGGASFSLSQVLPNTNPAPPEPQNVTESSVS--- 456

Query: 738 HNKRENSTKQVTSEVPVNESNNVG---KHTILHDKLSS---PSAKEEKTSASLD-GESDK 580
           H +     K     + V    ++G   +H++    LSS   PS   +  SA  D GE D 
Sbjct: 457 HTESRREVK-----LGVKSLKSLGATTEHSLEQKLLSSMGMPSTGTKVGSAVHDTGEHD- 510

Query: 579 VEMNSENSKIDNTVRSKSMGSNASNNKAPM-----KIVISEVCPFMRSNDSEKEWIKTRA 415
                E +K++          +  NNKA       KI ISEVCPFMR+ +SE++W K + 
Sbjct: 511 -----EKNKVEEV--------HEENNKAEQVRVVPKITISEVCPFMRNRESEQQWSKAKK 557

Query: 414 ALSG 403
            L+G
Sbjct: 558 VLTG 561


>dbj|BAK00941.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 599

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 46/162 (28%), Positives = 78/162 (48%)
 Frame = -2

Query: 888 GHLWSQKSSWKELVGEMGNSSFSISNIVPDIASKRQNAQNHFSTGIAGAFHNKRENSTKQ 709
           G +W+QKSSW++LVG MG +SFSIS ++P+        +    T +A     +   S   
Sbjct: 432 GSVWTQKSSWRDLVGGMGATSFSISQVLPNTNPAPPKLEPATETSVACTESRREVTSLGM 491

Query: 708 VTSEVPVNESNNVGKHTILHDKLSSPSAKEEKTSASLDGESDKVEMNSENSKIDNTVRSK 529
            + E P   +  + K  +L     +PSA       ++     ++  + EN+K++      
Sbjct: 492 TSLESPEAITQPLAKQNLL-SSTGTPSA-----GTTVGSAGHEIRGHDENNKVEEP---- 541

Query: 528 SMGSNASNNKAPMKIVISEVCPFMRSNDSEKEWIKTRAALSG 403
                    +   +I ISEVCPFMR+ +S ++W K +  L+G
Sbjct: 542 ---------RVVPRITISEVCPFMRNEESIQQWSKAKKVLTG 574


>gb|ABI15899.1| marker Xucw84 [Triticum dicoccoides]
          Length = 614

 Score = 73.2 bits (178), Expect = 9e-11
 Identities = 48/162 (29%), Positives = 79/162 (48%)
 Frame = -2

Query: 888 GHLWSQKSSWKELVGEMGNSSFSISNIVPDIASKRQNAQNHFSTGIAGAFHNKRENSTKQ 709
           G +W+QKS+W++LVG MG +SFSIS I+P+I       +    T +A      R  S ++
Sbjct: 447 GSVWTQKSAWRDLVGGMGATSFSISQILPNINPAPPKLEPATETSVA------RTESRRE 500

Query: 708 VTSEVPVNESNNVGKHTILHDKLSSPSAKEEKTSASLDGESDKVEMNSENSKIDNTVRSK 529
           VTS         +G  ++   +  +    E+ + +S    S    + S      +  R  
Sbjct: 501 VTS---------LGMTSLGSPEAITQPLAEQNSPSSTGTPSAGTTVGSAG----HETRGC 547

Query: 528 SMGSNASNNKAPMKIVISEVCPFMRSNDSEKEWIKTRAALSG 403
            + +     +   KI ISEVCPFMR+ +S ++W K +  L+G
Sbjct: 548 DVSNKVEEPRVVPKITISEVCPFMRNEESIQQWSKAKKVLTG 589


>ref|NP_001045836.1| Os02g0138200 [Oryza sativa Japonica Group]
           gi|42409268|dbj|BAD10531.1| RNA recognition motif
           (RRM)-containing protein-like [Oryza sativa Japonica
           Group] gi|113535367|dbj|BAF07750.1| Os02g0138200 [Oryza
           sativa Japonica Group] gi|125538008|gb|EAY84403.1|
           hypothetical protein OsI_05779 [Oryza sativa Indica
           Group] gi|125580747|gb|EAZ21678.1| hypothetical protein
           OsJ_05309 [Oryza sativa Japonica Group]
           gi|215694017|dbj|BAG89216.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 552

 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 48/160 (30%), Positives = 71/160 (44%)
 Frame = -2

Query: 882 LWSQKSSWKELVGEMGNSSFSISNIVPDIASKRQNAQNHFSTGIAGAFHNKRENSTKQVT 703
           LW+QKS+W++LVG MG++SFS+S I+P+            +        N  E S     
Sbjct: 402 LWTQKSAWRDLVGGMGSASFSLSQILPN------------TNPAPPKVSNATEASASHAE 449

Query: 702 SEVPVNESNNVGKHTILHDKLSSPSAKEEKTSASLDGESDKVEMNSENSKIDNTVRSKSM 523
           S   V  S    K +    +L         + A L  E        EN+K++        
Sbjct: 450 SRTKVKPSGKSLKPSEAATQLLPEQKMPTSSMAMLSSE------RKENNKLE-------- 495

Query: 522 GSNASNNKAPMKIVISEVCPFMRSNDSEKEWIKTRAALSG 403
                  +   KI I EVCPFMR+++SEK+W K +  L+G
Sbjct: 496 -----KERVVPKITIGEVCPFMRNSESEKQWSKAKKVLTG 530


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