BLASTX nr result

ID: Coptis24_contig00015513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015513
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284579.1| PREDICTED: uncharacterized protein LOC100252...   125   7e-27
ref|XP_002278870.1| PREDICTED: uncharacterized protein LOC100249...   125   9e-27
gb|ABK93118.1| unknown [Populus trichocarpa] gi|118483290|gb|ABK...   121   1e-25
ref|XP_002329360.1| predicted protein [Populus trichocarpa] gi|1...   120   2e-25
ref|XP_002319921.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25

>ref|XP_002284579.1| PREDICTED: uncharacterized protein LOC100252136 [Vitis vinifera]
           gi|302143071|emb|CBI20366.3| unnamed protein product
           [Vitis vinifera]
          Length = 98

 Score =  125 bits (314), Expect = 7e-27
 Identities = 61/89 (68%), Positives = 70/89 (78%), Gaps = 3/89 (3%)
 Frame = -2

Query: 598 RQSASLIRLTSQSSTQAASRLIPQRNLSGGGDHHGPPRVNIWQDPLSPSKWKEEHFVIAS 419
           RQ+ +L RL+S +    A+ LI +R L+ GGDHHGPP+VN WQDPLSPSKWKEEHFVI S
Sbjct: 9   RQAGNLTRLSSPAPL--ATSLIHRRGLASGGDHHGPPKVNFWQDPLSPSKWKEEHFVIVS 66

Query: 418 LTGWGLLIYGSYKFFTKGK---KEEKVTD 341
           L+GWGLL YG YKFFTKGK   KEEKV D
Sbjct: 67  LSGWGLLFYGGYKFFTKGKKDNKEEKVGD 95


>ref|XP_002278870.1| PREDICTED: uncharacterized protein LOC100249870 isoform 1 [Vitis
           vinifera] gi|359485558|ref|XP_003633290.1| PREDICTED:
           uncharacterized protein LOC100249870 isoform 2 [Vitis
           vinifera] gi|297739274|emb|CBI28925.3| unnamed protein
           product [Vitis vinifera]
          Length = 100

 Score =  125 bits (313), Expect = 9e-27
 Identities = 55/88 (62%), Positives = 71/88 (80%), Gaps = 2/88 (2%)
 Frame = -2

Query: 598 RQSASLIRLTSQSSTQAASRLIPQRNLSGGGDHHGPPRVNIWQDPLSPSKWKEEHFVIAS 419
           RQ+A L RL+S   +  ++ LI +R L+G  DHHGPPR+N+W+DP+SPSKWKEEHFVI S
Sbjct: 10  RQAAILTRLSSAKPSPQSANLIQRRGLAGAADHHGPPRINVWEDPMSPSKWKEEHFVIVS 69

Query: 418 LTGWGLLIYGSYKFFTKGK--KEEKVTD 341
           L+GWGLL +GSYKFFT+GK  KEEK+ +
Sbjct: 70  LSGWGLLFFGSYKFFTRGKKDKEEKLVE 97


>gb|ABK93118.1| unknown [Populus trichocarpa] gi|118483290|gb|ABK93547.1| unknown
           [Populus trichocarpa]
          Length = 100

 Score =  121 bits (303), Expect = 1e-25
 Identities = 55/85 (64%), Positives = 67/85 (78%), Gaps = 2/85 (2%)
 Frame = -2

Query: 598 RQSASLIRLTSQSSTQAASRLIPQRNLSGGGDHHGPPRVNIWQDPLSPSKWKEEHFVIAS 419
           RQ+ +L R++S  +   A+ LI +R L+G  DHHGPPR+N WQDP+SPSKWKEEHFVI S
Sbjct: 10  RQAVTLSRISSPKTPAQAAALIHRRGLAGAADHHGPPRINCWQDPMSPSKWKEEHFVIVS 69

Query: 418 LTGWGLLIYGSYKFFTKGK--KEEK 350
           L+GWG+LIYG YKFFT GK  KEEK
Sbjct: 70  LSGWGVLIYGGYKFFTGGKSNKEEK 94


>ref|XP_002329360.1| predicted protein [Populus trichocarpa] gi|118481328|gb|ABK92607.1|
           unknown [Populus trichocarpa]
           gi|118481455|gb|ABK92670.1| unknown [Populus
           trichocarpa] gi|118483232|gb|ABK93519.1| unknown
           [Populus trichocarpa] gi|222870410|gb|EEF07541.1|
           predicted protein [Populus trichocarpa]
          Length = 100

 Score =  120 bits (302), Expect = 2e-25
 Identities = 55/85 (64%), Positives = 67/85 (78%), Gaps = 2/85 (2%)
 Frame = -2

Query: 598 RQSASLIRLTSQSSTQAASRLIPQRNLSGGGDHHGPPRVNIWQDPLSPSKWKEEHFVIAS 419
           RQ+ +L R++S  +   A+ LI +R L+G  DHHGPPR+N WQDP+SPSKWKEEHFVI S
Sbjct: 10  RQAVTLSRVSSPKTPAQAAALIHRRGLAGAADHHGPPRINCWQDPMSPSKWKEEHFVIVS 69

Query: 418 LTGWGLLIYGSYKFFTKGK--KEEK 350
           L+GWG+LIYG YKFFT GK  KEEK
Sbjct: 70  LSGWGVLIYGGYKFFTGGKSNKEEK 94


>ref|XP_002319921.1| predicted protein [Populus trichocarpa] gi|222858297|gb|EEE95844.1|
           predicted protein [Populus trichocarpa]
          Length = 101

 Score =  120 bits (301), Expect = 2e-25
 Identities = 55/88 (62%), Positives = 67/88 (76%), Gaps = 2/88 (2%)
 Frame = -2

Query: 598 RQSASLIRLTSQSSTQAASRLIPQRNLSGGGDHHGPPRVNIWQDPLSPSKWKEEHFVIAS 419
           RQ+A+L R++S  S    + LI +R L+G  DHHGP R+N WQDP+SPSKWKEEHFVI S
Sbjct: 11  RQAATLSRISSPKSPAQVAALIHRRGLAGAADHHGPSRINCWQDPMSPSKWKEEHFVIVS 70

Query: 418 LTGWGLLIYGSYKFFT--KGKKEEKVTD 341
           L+GWGL  YG YKFFT  KGK+EEKV +
Sbjct: 71  LSGWGLAFYGGYKFFTGGKGKEEEKVVE 98


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