BLASTX nr result

ID: Coptis24_contig00015438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015438
         (1349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283909.1| PREDICTED: fasciclin-like arabinogalactan pr...   520   e-145
emb|CAN72469.1| hypothetical protein VITISV_006797 [Vitis vinifera]   516   e-144
ref|XP_004150187.1| PREDICTED: fasciclin-like arabinogalactan pr...   494   e-137
gb|ABV27480.1| fasciclin-like arabinogalactan protein 9 [Gossypi...   478   e-132
gb|ABV27479.1| fasciclin-like arabinogalactan protein 8 [Gossypi...   461   e-127

>ref|XP_002283909.1| PREDICTED: fasciclin-like arabinogalactan protein 4 [Vitis vinifera]
          Length = 425

 Score =  520 bits (1339), Expect = e-145
 Identities = 286/432 (66%), Positives = 331/432 (76%), Gaps = 18/432 (4%)
 Frame = -2

Query: 1279 MAIISYSHFTPPLFLISLLVLSP-PIFSINITSLLSPFPDLSDFNNLLTTSSVSQDLIQR 1103
            MA +  SHF P   +  LL+ S  PI ++NITSLLS +PDLSDF NLLT ++V  DLI R
Sbjct: 1    MAALRISHFAPTAIVYFLLLSSSYPIVALNITSLLSTYPDLSDFANLLTATAVDGDLIHR 60

Query: 1102 SSLTLLAVPNSFLRSSSDLTHRSN---IADILRYHILLQYLTWSEFRQIPTYGKLFTTLY 932
            SSLTLLAVPNSFLRSS DLTHRS+   +AD++RYH+LLQYL+W + RQIP  GKL TTLY
Sbjct: 61   SSLTLLAVPNSFLRSS-DLTHRSSASSLADVIRYHVLLQYLSWPDIRQIPAAGKLITTLY 119

Query: 931  QTTGRANGNLGAVNITRDPS-GTVSIRSPVSYSSLNITLLSLIKTVPYNVTIFTVNSLLI 755
            QTTGRA  N G+VNITR+P+ G VS+ SP SYS  N T+LSLIKT+PYNV+IFTVNSLL+
Sbjct: 120  QTTGRATSNFGSVNITRNPANGAVSVHSPASYSPSNATILSLIKTLPYNVSIFTVNSLLV 179

Query: 754  PYGFDLMASETRPPLGLNITRVLMDAKNFNVAASMLTASGVTDDFERSEAGAGITMFVPT 575
            PYGFDLMASE+RPPLGLNIT+ L+D  NFNVAASML ASGV ++FE  EAGAGITMF+PT
Sbjct: 180  PYGFDLMASESRPPLGLNITKTLIDGHNFNVAASMLMASGVVEEFEADEAGAGITMFIPT 239

Query: 574  DSAFGDLPTTERFQSLPADRKKVVLKFHVLHSYYPLGSLESIVNPVQPTLATEVMGAGRF 395
            D AF DLPTTER QSLPAD+K VVLKFHVLHSYY LGSLESIVNPVQPTLATE MGA  F
Sbjct: 240  DDAFADLPTTERLQSLPADKKAVVLKFHVLHSYYTLGSLESIVNPVQPTLATEEMGAESF 299

Query: 394  TLNISRVNGSLAIDTGIVQASITQTVFDQNPVAIFAVSRVLLPREYFGKDFSGGTSRS-G 218
            TLNISRVNGS+AID+GIVQAS+TQTVFDQNPVAIF VS+VLLPRE FG +    T  S  
Sbjct: 300  TLNISRVNGSVAIDSGIVQASVTQTVFDQNPVAIFGVSKVLLPREIFGNNPISTTRPSPN 359

Query: 217  NRIIGAAAAPE-TFSPRYSPGFDNISPTYSPGSG--------EKIRSNAAFSHGIRLL-- 71
            N   G+A  P+ +FSP  SPG      +Y+P SG        E++RS A  +   R +  
Sbjct: 360  NEATGSAQPPDISFSPENSPG------SYTPPSGMSSPPGFHEELRSEAQINRAQRFILA 413

Query: 70   -TQFCIVLYVLV 38
                CI LYV+V
Sbjct: 414  CAMSCIGLYVVV 425


>emb|CAN72469.1| hypothetical protein VITISV_006797 [Vitis vinifera]
          Length = 470

 Score =  516 bits (1328), Expect = e-144
 Identities = 284/431 (65%), Positives = 329/431 (76%), Gaps = 18/431 (4%)
 Frame = -2

Query: 1279 MAIISYSHFTPPLFLISLLVLSP-PIFSINITSLLSPFPDLSDFNNLLTTSSVSQDLIQR 1103
            MA +  SHF P   +  LL+ S  PI ++NITSLLS +PDLSDF NLLT ++V  DLI R
Sbjct: 1    MAALRISHFAPTAIVYFLLLSSSYPIVALNITSLLSTYPDLSDFANLLTATAVDGDLIHR 60

Query: 1102 SSLTLLAVPNSFLRSSSDLTHRSN---IADILRYHILLQYLTWSEFRQIPTYGKLFTTLY 932
            SSLTLLAVPNSFLRSS DLTHRS+   +AD++RYH+LLQYL+W + RQIP  GKL TTLY
Sbjct: 61   SSLTLLAVPNSFLRSS-DLTHRSSASSLADVIRYHVLLQYLSWPDIRQIPAAGKLITTLY 119

Query: 931  QTTGRANGNLGAVNITRDPS-GTVSIRSPVSYSSLNITLLSLIKTVPYNVTIFTVNSLLI 755
            QTTGRA  N G+VNITR+P+ G VS+ SP SYS  N T+LSLIKT+PYNV+IFTVNSLL+
Sbjct: 120  QTTGRATSNFGSVNITRNPANGAVSVHSPASYSPSNATILSLIKTLPYNVSIFTVNSLLV 179

Query: 754  PYGFDLMASETRPPLGLNITRVLMDAKNFNVAASMLTASGVTDDFERSEAGAGITMFVPT 575
            PYGFDLMASE+RPPLGLNIT+ L+D  NFNVAASML ASGV ++FE  EAGAGITMF+PT
Sbjct: 180  PYGFDLMASESRPPLGLNITKTLIDGHNFNVAASMLMASGVVEEFEADEAGAGITMFIPT 239

Query: 574  DSAFGDLPTTERFQSLPADRKKVVLKFHVLHSYYPLGSLESIVNPVQPTLATEVMGAGRF 395
            D AF DLPTTER QSLPAD+K VVLKFHVLHSYY LGSLESIVNPVQPTLATE MGA  F
Sbjct: 240  DDAFADLPTTERLQSLPADKKAVVLKFHVLHSYYTLGSLESIVNPVQPTLATEEMGAESF 299

Query: 394  TLNISRVNGSLAIDTGIVQASITQTVFDQNPVAIFAVSRVLLPREYFGKDFSGGTSRS-G 218
            TLNISRVNGS+AID+GIVQAS+TQTVFDQNPVAIF VS+VLLPRE FG +    T  S  
Sbjct: 300  TLNISRVNGSVAIDSGIVQASVTQTVFDQNPVAIFGVSKVLLPREIFGNNPISTTRPSPN 359

Query: 217  NRIIGAAAAPE-TFSPRYSPGFDNISPTYSPGSG--------EKIRSNAAFSHGIRLL-- 71
            N   G+A  P+ + SP  SPG      +Y+P SG        E++RS A  +   R +  
Sbjct: 360  NEATGSAQPPDISXSPENSPG------SYTPPSGMSSPPGFHEELRSEAQINRAQRFILA 413

Query: 70   -TQFCIVLYVL 41
                CI LYV+
Sbjct: 414  CAMSCIGLYVV 424


>ref|XP_004150187.1| PREDICTED: fasciclin-like arabinogalactan protein 4-like [Cucumis
            sativus]
          Length = 424

 Score =  494 bits (1271), Expect = e-137
 Identities = 264/416 (63%), Positives = 317/416 (76%), Gaps = 9/416 (2%)
 Frame = -2

Query: 1261 SHFTPPLFLISLLVLSPPIFSINITSLLSPFPDLSDFNNLLTTSSVSQDLIQRSSLTLLA 1082
            SHFTP   L  LL+ S PI ++N +SLLS FPDLSDF  LL++S++  DL  R+SLTLLA
Sbjct: 9    SHFTPLHLLYFLLLSSSPILALNFSSLLSSFPDLSDFAALLSSSALLSDLNHRTSLTLLA 68

Query: 1081 VPNSFLRSSSDLTHR---SNIADILRYHILLQYLTWSEFRQIPTYGKLFTTLYQTTGRAN 911
            VPNS+L +SSDLTHR   S++AD+LRYH+LLQYL+ S+ R I   GKL TTL+QTTGRA 
Sbjct: 69   VPNSYLAASSDLTHRIPPSSLADLLRYHVLLQYLSPSDLRHISPSGKLVTTLFQTTGRAT 128

Query: 910  GNLGAVNITRDP-SGTVSIRSPVSYSSLNITLLSLIKTVPYNVTIFTVNSLLIPYGFDLM 734
             + G+VNITR+P  G VS+ SPV +SS N T+L+L++ +PYNV+IF VN+LL+PYGFDLM
Sbjct: 129  SDFGSVNITRNPLDGVVSVHSPVPFSSSNATVLTLLQNLPYNVSIFAVNALLVPYGFDLM 188

Query: 733  ASETRPPLGLNITRVLMDAKNFNVAASMLTASGVTDDFERSEAGAGITMFVPTDSAFGDL 554
            ASETRPPLGLNITR L+D  NFNVAASML+ASGV ++FE  E GAGIT+FVPTD AF DL
Sbjct: 189  ASETRPPLGLNITRALIDGHNFNVAASMLSASGVVEEFEADEGGAGITLFVPTDVAFSDL 248

Query: 553  PTTERFQSLPADRKKVVLKFHVLHSYYPLGSLESIVNPVQPTLATEVMGAGRFTLNISRV 374
            P T + QSLPAD+K VVLKFHVLHSYYPLGSLESIVNPVQPTLATE MGAGRFTLNISRV
Sbjct: 249  PGTVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDMGAGRFTLNISRV 308

Query: 373  NGSLAIDTGIVQASITQTVFDQNPVAIFAVSRVLLPREYFGKDFSGGTSRSGNRIIGAAA 194
            NGS+ I+TGIVQAS+TQTVFDQNPVAIF VS VLLPRE FG +    T++  N I+G A 
Sbjct: 309  NGSVGINTGIVQASVTQTVFDQNPVAIFGVSEVLLPREIFGNN-PMMTAKPRNEIVGNAQ 367

Query: 193  APETFSPRYSPGFDNISPTYSPGSGEKIRSNAAFSHGIRLLTQFC-----IVLYVL 41
             PE  +         +  +  PG GE+IRS AA + G+      C     + LYV+
Sbjct: 368  PPEGMAMSPESNGPQLHLSSPPGYGEEIRSVAAINGGVNFFFTLCSCCIAVALYVI 423


>gb|ABV27480.1| fasciclin-like arabinogalactan protein 9 [Gossypium hirsutum]
          Length = 436

 Score =  478 bits (1229), Expect = e-132
 Identities = 268/430 (62%), Positives = 321/430 (74%), Gaps = 21/430 (4%)
 Frame = -2

Query: 1279 MAI-ISYSHFTPP--LFLISLLVLSPPIFS--------INITSLLSPFPDLSDFNNLLTT 1133
            MAI +S SH TP    +L+ LL+LS  I +        +NITS+LS F +L+ F++LL +
Sbjct: 1    MAISVSISHITPITLFYLLLLLLLSSTITTTTTTTTSALNITSILSSFQNLTSFSSLLCS 60

Query: 1132 SSVSQDLIQRSSLTLLAVPNSFLRSS--SDLTHR---SNIADILRYHILLQYLTWSEFRQ 968
            +SV+ DL +R  +TLLAVPNS+L +S  SDLT R   S++ DILRYH+LLQY +WS+ RQ
Sbjct: 61   TSVAPDLTRRDPVTLLAVPNSYLSTSPSSDLTRRLPPSSLGDILRYHVLLQYFSWSDLRQ 120

Query: 967  IPTYGKLFTTLYQTTGRANGNLGAVNITRDP-SGTVSIRSPVSYSSLNITLLSLIKTVPY 791
            IP  G L TTL QTTGR + N GAVNITRDP + +++I+SP  +S  N+T+LSLIKT+PY
Sbjct: 121  IPPSGVLVTTLLQTTGRVHSNFGAVNITRDPLTNSITIQSPAPFSPSNVTVLSLIKTLPY 180

Query: 790  NVTIFTVNSLLIPYGFDLMASETRPPLGLNITRVLMDAKNFNVAASMLTASGVTDDFERS 611
            N+TI  V+SLL+PY F+L+ASETRPPLGLNIT+ L+D  NFNVAASML ASGV D+FE  
Sbjct: 181  NITILAVDSLLVPYDFNLLASETRPPLGLNITKALIDGHNFNVAASMLAASGVVDEFEAD 240

Query: 610  EAGAGITMFVPTDSAFGDLPTTERFQSLPADRKKVVLKFHVLHSYYPLGSLESIVNPVQP 431
            E GAGIT+FVPTD AFGDLP   + QSLPAD+K VVLKFHVLHSYYPLGSLESIVNPVQP
Sbjct: 241  EGGAGITLFVPTDDAFGDLPGNVKLQSLPADKKAVVLKFHVLHSYYPLGSLESIVNPVQP 300

Query: 430  TLATEVMGAGRFTLNISRVNGSLAIDTGIVQASITQTVFDQNPVAIFAVSRVLLPREYFG 251
            TLATE  GAG FTLNISRVNGS+AIDTGIVQAS+TQTVFDQNPVAIF VS+VLLPRE FG
Sbjct: 301  TLATEDNGAGSFTLNISRVNGSVAIDTGIVQASVTQTVFDQNPVAIFGVSKVLLPREIFG 360

Query: 250  KDFSGGTSRSGNRIIGAAA-APETF-SPRYSPGFDNISPTYS--PGSGEKIRSNAAFSHG 83
            KD +G TS+ GN ++G     PET  SP  S GF   +   S  PG  E+I S      G
Sbjct: 361  KDSAGVTSKPGNAVVGTTVQPPETSPSPENSAGFSGPASHLSSPPGFREEITSK-----G 415

Query: 82   IRLLTQFCIV 53
             R   Q CIV
Sbjct: 416  GRYRMQSCIV 425


>gb|ABV27479.1| fasciclin-like arabinogalactan protein 8 [Gossypium hirsutum]
          Length = 424

 Score =  461 bits (1187), Expect = e-127
 Identities = 258/424 (60%), Positives = 312/424 (73%), Gaps = 16/424 (3%)
 Frame = -2

Query: 1261 SHFTPPLFLISLLVLSPPIFSINITSLLSPFPDLSDFNNLLTTSSVSQDLIQRSS-LTLL 1085
            SH TP  F   LL+ S     +NITS+LS F +L+ F++LLT+SSV+ DL +R   +T+L
Sbjct: 8    SHITPLTFFCFLLLSSSAAADLNITSILSSFQNLTSFSSLLTSSSVASDLTRRQDPITVL 67

Query: 1084 AVPNSFLR--SSSDLTHR---SNIADILRYHILLQYLTWSEFRQIPTYGKLFTTLYQTTG 920
            AVPNS+L    +SDLT R   S++ DILRYH+LL Y +W++  QIP  G L TTL QTT 
Sbjct: 68   AVPNSYLSIPPASDLTRRLPPSSLGDILRYHVLLHYFSWTDLLQIPPSGVLVTTLLQTTS 127

Query: 919  RANGNLGAVNITRDP-SGTVSIRSPVSYSSLNITLLSLIKTVPYNVTIFTVNSLLIPYGF 743
            RA  N GAVNITR+P + +++I+SPV++S  N T+LS+IKT+PYN+TI  V+SLL+PY F
Sbjct: 128  RAPANFGAVNITRNPLTNSITIQSPVTFSPSNATVLSVIKTLPYNITILAVDSLLVPYDF 187

Query: 742  DLMASETRPPLGLNITRVLMDAKNFNVAASMLTASGVTDDFERSEAGAGITMFVPTDSAF 563
            +LM SETRPPLGLNIT+ L+D  NFNVAA+ML+ASGV D+FE  E GAGIT+FVPTD AF
Sbjct: 188  NLMTSETRPPLGLNITKALIDGHNFNVAAAMLSASGVVDEFEADEGGAGITLFVPTDGAF 247

Query: 562  GDLPTTERFQSLPADRKKVVLKFHVLHSYYPLGSLESIVNPVQPTLATEVMGAGRFTLNI 383
            GDLP   R +SLPAD+K VVLKFHVLHSYYPLGSLESIVNPVQPTLATE  GAG FTLNI
Sbjct: 248  GDLPGNVRLKSLPADKKSVVLKFHVLHSYYPLGSLESIVNPVQPTLATEDNGAGSFTLNI 307

Query: 382  SRVNGSLAIDTGIVQASITQTVFDQNPVAIFAVSRVLLPREYFGKDFSGGTSRSGNRIIG 203
            S VNGS+AIDTGIVQAS+TQTVFDQNPVAIF VS+VLLPRE FGKD +G  ++ GN ++G
Sbjct: 308  SGVNGSVAIDTGIVQASVTQTVFDQNPVAIFGVSKVLLPREVFGKDSAGAMAKPGNPVVG 367

Query: 202  A-AAAPETF-SPRYSPGFDNISPTYSP-GSGEKIRSNAAFSHGIRLLTQFCIV------L 50
                 PET  SP  SP      P  SP G  E ++SN     G R   Q CIV      L
Sbjct: 368  TNVQPPETSPSPENSPWLS--GPASSPFGFHEDMKSN-----GERFRLQSCIVALCCIGL 420

Query: 49   YVLV 38
            Y+LV
Sbjct: 421  YLLV 424


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