BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015375
         (1477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528761.1| isocitrate dehydrogenase, putative [Ricinus ...   627   e-177
ref|XP_004134829.1| PREDICTED: isocitrate dehydrogenase [NAD] re...   616   e-174
ref|XP_002265376.2| PREDICTED: isocitrate dehydrogenase [NAD] re...   615   e-174
ref|XP_002310697.1| predicted protein [Populus trichocarpa] gi|2...   608   e-171
ref|NP_001141883.1| hypothetical protein [Zea mays] gi|194706290...   600   e-169

>ref|XP_002528761.1| isocitrate dehydrogenase, putative [Ricinus communis]
            gi|223531764|gb|EEF33583.1| isocitrate dehydrogenase,
            putative [Ricinus communis]
          Length = 372

 Score =  627 bits (1617), Expect = e-177
 Identities = 317/372 (85%), Positives = 334/372 (89%)
 Frame = +1

Query: 100  MARRTLPILKQLLNSTKTHTPISHILATRSVTYMPRPGDGTPRAVTLIPGDGIGPLVTGA 279
            MARR++PILK+LL+S+   +  S +++ RSVTYMPRPGDG PR VTLIPGDGIGPLVTGA
Sbjct: 1    MARRSIPILKKLLSSSNNESTCSRLVSRRSVTYMPRPGDGAPRGVTLIPGDGIGPLVTGA 60

Query: 280  VEQVMEAMHAPVYFERYEVHGDMVKVPQEVLDSIMKNKVCLKGGLATPVGGGVSSLNVQL 459
            VEQVMEAMHAPVYFERYEVHGDM KVP EV++SI KNKVCLKGGLATP+GGGVSSLNVQL
Sbjct: 61   VEQVMEAMHAPVYFERYEVHGDMKKVPAEVIESIKKNKVCLKGGLATPMGGGVSSLNVQL 120

Query: 460  RKELDLYASLVNCFNLPGLNTRHEGVDIVVVRENTEGEYAGLEHEVVPGVVESLKVITKF 639
            RKELDLYASLVNCFNLPGL TRHE VDIVV+RENTEGEY+GLEHEVVPGVVESLKVITKF
Sbjct: 121  RKELDLYASLVNCFNLPGLPTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVITKF 180

Query: 640  CSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDN 819
            CSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDN
Sbjct: 181  CSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDN 240

Query: 820  CCMQLVSKPEQFDVMVTPNLYGNLVXXXXXXXXXXXXXXXXXXXXADHAIFEQGASAGNV 999
            CCMQLVSKPEQFDVMVTPNLYGNLV                    ADHAIFEQGASAGNV
Sbjct: 241  CCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAIFEQGASAGNV 300

Query: 1000 GNEMLMEQKKANPVALLLSSAMMLRHLQFPSFADRLETAVMRVISEGKYRTKDLGGTSTT 1179
            GNE ++EQKKANPVALLLSSAMMLRHLQFPSFADRLETAV RVISEGKYRTKDLGG S+T
Sbjct: 301  GNEKIVEQKKANPVALLLSSAMMLRHLQFPSFADRLETAVERVISEGKYRTKDLGGDSST 360

Query: 1180 QEVVDAVIATLD 1215
            QEVVDAVIA LD
Sbjct: 361  QEVVDAVIAALD 372


>ref|XP_004134829.1| PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1,
            mitochondrial-like [Cucumis sativus]
          Length = 381

 Score =  616 bits (1588), Expect = e-174
 Identities = 316/381 (82%), Positives = 334/381 (87%), Gaps = 9/381 (2%)
 Frame = +1

Query: 100  MARRTLPILKQLLN-STKTHTPI--------SHILATRSVTYMPRPGDGTPRAVTLIPGD 252
            MARR+LPILKQLL+ S+ +  P         S    +RSVTYMPRPGDG PRAVTLIPGD
Sbjct: 1    MARRSLPILKQLLSKSSSSENPALLSSCFKSSIDAQSRSVTYMPRPGDGAPRAVTLIPGD 60

Query: 253  GIGPLVTGAVEQVMEAMHAPVYFERYEVHGDMVKVPQEVLDSIMKNKVCLKGGLATPVGG 432
            GIGPLVTGAVEQVM+AMHAPVYFE++E+HGDM KVPQEV+DSI KNKVCLKGGL TPVGG
Sbjct: 61   GIGPLVTGAVEQVMDAMHAPVYFEKFEIHGDMKKVPQEVIDSIKKNKVCLKGGLVTPVGG 120

Query: 433  GVSSLNVQLRKELDLYASLVNCFNLPGLNTRHEGVDIVVVRENTEGEYAGLEHEVVPGVV 612
            GVSSLNVQLRKELDLYASLVNCFNLPGL TRHE VDIVV+RENTEGEY+GLEHEVVPGVV
Sbjct: 121  GVSSLNVQLRKELDLYASLVNCFNLPGLPTRHENVDIVVIRENTEGEYSGLEHEVVPGVV 180

Query: 613  ESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGI 792
            ESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGI
Sbjct: 181  ESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGI 240

Query: 793  KYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVXXXXXXXXXXXXXXXXXXXXADHAIF 972
            KYNE+IVDNCCMQLVSKPEQFDVMVTPNLYGNLV                    ADHA+F
Sbjct: 241  KYNEVIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVF 300

Query: 973  EQGASAGNVGNEMLMEQKKANPVALLLSSAMMLRHLQFPSFADRLETAVMRVISEGKYRT 1152
            EQGASAGNVGNE L+EQKKANPVALLLSSAMMLRHLQFPSFADRLETAV +VI EGKYRT
Sbjct: 301  EQGASAGNVGNERLVEQKKANPVALLLSSAMMLRHLQFPSFADRLETAVKKVIFEGKYRT 360

Query: 1153 KDLGGTSTTQEVVDAVIATLD 1215
            KDLGG STTQEV+DAVIA+LD
Sbjct: 361  KDLGGQSTTQEVIDAVIASLD 381


>ref|XP_002265376.2| PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1,
            mitochondrial-like [Vitis vinifera]
          Length = 375

 Score =  615 bits (1587), Expect = e-174
 Identities = 314/375 (83%), Positives = 332/375 (88%), Gaps = 3/375 (0%)
 Frame = +1

Query: 100  MARRTLPILKQLLNSTKTHTPI---SHILATRSVTYMPRPGDGTPRAVTLIPGDGIGPLV 270
            MA RTLPILKQLL+ + ++      S     RSVTYMPRPGDG PR VTLIPGDGIGPLV
Sbjct: 1    MAPRTLPILKQLLSKSSSYNTNFIGSRFAPKRSVTYMPRPGDGAPRPVTLIPGDGIGPLV 60

Query: 271  TGAVEQVMEAMHAPVYFERYEVHGDMVKVPQEVLDSIMKNKVCLKGGLATPVGGGVSSLN 450
            TGAVEQVM+AMHAPVYFERYEVHGDM KVP+EVL+SI KNKVCLKGGLATP+GGGVSSLN
Sbjct: 61   TGAVEQVMDAMHAPVYFERYEVHGDMKKVPEEVLESIRKNKVCLKGGLATPMGGGVSSLN 120

Query: 451  VQLRKELDLYASLVNCFNLPGLNTRHEGVDIVVVRENTEGEYAGLEHEVVPGVVESLKVI 630
            VQLRKELDLYASLVNCFNLPGL TRH+ VDIVV+RENTEGEY+GLEHEVVPGVVESLKVI
Sbjct: 121  VQLRKELDLYASLVNCFNLPGLPTRHQNVDIVVIRENTEGEYSGLEHEVVPGVVESLKVI 180

Query: 631  TKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEII 810
            TKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKY+EII
Sbjct: 181  TKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYSEII 240

Query: 811  VDNCCMQLVSKPEQFDVMVTPNLYGNLVXXXXXXXXXXXXXXXXXXXXADHAIFEQGASA 990
            VDNCCMQLVSKPEQFDVMVTPNLYGNLV                    ADHA+FEQGASA
Sbjct: 241  VDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASA 300

Query: 991  GNVGNEMLMEQKKANPVALLLSSAMMLRHLQFPSFADRLETAVMRVISEGKYRTKDLGGT 1170
            GNVG++ L+EQKKANPVALLLSSAMMLRHLQFPSFADRLETAV RVISEGKYRTKDLGG 
Sbjct: 301  GNVGHQKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLETAVKRVISEGKYRTKDLGGD 360

Query: 1171 STTQEVVDAVIATLD 1215
            S+TQE+VDAVIATLD
Sbjct: 361  SSTQEIVDAVIATLD 375


>ref|XP_002310697.1| predicted protein [Populus trichocarpa] gi|222853600|gb|EEE91147.1|
            predicted protein [Populus trichocarpa]
          Length = 366

 Score =  608 bits (1568), Expect = e-171
 Identities = 310/372 (83%), Positives = 325/372 (87%)
 Frame = +1

Query: 100  MARRTLPILKQLLNSTKTHTPISHILATRSVTYMPRPGDGTPRAVTLIPGDGIGPLVTGA 279
            MARR++P+LK LL S+ T T        RSVTYMPRPGDG PR VTLIPGDGIGPLVT A
Sbjct: 1    MARRSIPVLKHLLTSSSTPT------LRRSVTYMPRPGDGAPRPVTLIPGDGIGPLVTNA 54

Query: 280  VEQVMEAMHAPVYFERYEVHGDMVKVPQEVLDSIMKNKVCLKGGLATPVGGGVSSLNVQL 459
            VEQVMEAMHAPVYFE+Y++HGDM++VP EV++SI KNKVCLKGGLATP+GGGVSSLNVQL
Sbjct: 55   VEQVMEAMHAPVYFEKYDIHGDMMRVPSEVIESIKKNKVCLKGGLATPMGGGVSSLNVQL 114

Query: 460  RKELDLYASLVNCFNLPGLNTRHEGVDIVVVRENTEGEYAGLEHEVVPGVVESLKVITKF 639
            RKELDLYASLVNCFNL GL TRHE VDIVV+RENTEGEYAGLEHEVVPGVVESLKVITKF
Sbjct: 115  RKELDLYASLVNCFNLQGLPTRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKF 174

Query: 640  CSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDN 819
            CSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDN
Sbjct: 175  CSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDN 234

Query: 820  CCMQLVSKPEQFDVMVTPNLYGNLVXXXXXXXXXXXXXXXXXXXXADHAIFEQGASAGNV 999
            CCMQLVSKPEQFDVMVTPNLYGNLV                    ADHAIFEQGASAGNV
Sbjct: 235  CCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAIFEQGASAGNV 294

Query: 1000 GNEMLMEQKKANPVALLLSSAMMLRHLQFPSFADRLETAVMRVISEGKYRTKDLGGTSTT 1179
            GN+ L+EQK ANPVALLLSSAMMLRHLQFPSFADRLETAV RVISE  YRTKDLGGTSTT
Sbjct: 295  GNDKLLEQKTANPVALLLSSAMMLRHLQFPSFADRLETAVKRVISESHYRTKDLGGTSTT 354

Query: 1180 QEVVDAVIATLD 1215
            QEVVDAVI  LD
Sbjct: 355  QEVVDAVIGALD 366


>ref|NP_001141883.1| hypothetical protein [Zea mays] gi|194706290|gb|ACF87229.1| unknown
            [Zea mays] gi|413922890|gb|AFW62822.1| hypothetical
            protein ZEAMMB73_715539 [Zea mays]
          Length = 373

 Score =  600 bits (1546), Expect = e-169
 Identities = 303/372 (81%), Positives = 327/372 (87%), Gaps = 1/372 (0%)
 Frame = +1

Query: 100  MARRTLPILKQLLN-STKTHTPISHILATRSVTYMPRPGDGTPRAVTLIPGDGIGPLVTG 276
            MARR+ P+L++LL  S    TP++  ++ R+VTYMPRPGDG PR VTLIPGDGIGPLVTG
Sbjct: 1    MARRSTPLLRRLLAPSPSLPTPLADAVSRRTVTYMPRPGDGAPRGVTLIPGDGIGPLVTG 60

Query: 277  AVEQVMEAMHAPVYFERYEVHGDMVKVPQEVLDSIMKNKVCLKGGLATPVGGGVSSLNVQ 456
            AV QVMEAMHAPVYFE YEVHGDM  VP EV++SI +NKVCLKGGLATPVGGGVSSLNVQ
Sbjct: 61   AVRQVMEAMHAPVYFETYEVHGDMPTVPAEVIESIRRNKVCLKGGLATPVGGGVSSLNVQ 120

Query: 457  LRKELDLYASLVNCFNLPGLNTRHEGVDIVVVRENTEGEYAGLEHEVVPGVVESLKVITK 636
            LRKELDLYA+LVNCFNLPGL TRH+ VDIVV+REN+EGEY+GLEHEVVPGVVESLKVITK
Sbjct: 121  LRKELDLYAALVNCFNLPGLPTRHDNVDIVVIRENSEGEYSGLEHEVVPGVVESLKVITK 180

Query: 637  FCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVD 816
            FCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVA KYPGIKYNEIIVD
Sbjct: 181  FCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVAKKYPGIKYNEIIVD 240

Query: 817  NCCMQLVSKPEQFDVMVTPNLYGNLVXXXXXXXXXXXXXXXXXXXXADHAIFEQGASAGN 996
            NCCMQLV+KPEQFDVMVTPNLYGNLV                     DHAIFEQGASAGN
Sbjct: 241  NCCMQLVAKPEQFDVMVTPNLYGNLVANVAAGIAGGTGVMPGGNVGQDHAIFEQGASAGN 300

Query: 997  VGNEMLMEQKKANPVALLLSSAMMLRHLQFPSFADRLETAVMRVISEGKYRTKDLGGTST 1176
            VGNE ++E+K+ANPVALLLSSAMMLRHLQFPSFADRLETAV RVI+EGKYRTKDLGGTST
Sbjct: 301  VGNEKIVEKKRANPVALLLSSAMMLRHLQFPSFADRLETAVKRVIAEGKYRTKDLGGTST 360

Query: 1177 TQEVVDAVIATL 1212
            TQEV+DAVIA L
Sbjct: 361  TQEVIDAVIAKL 372