BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015338
         (1218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]               363   5e-98
emb|CAN72171.1| hypothetical protein VITISV_036207 [Vitis vinifera]   350   4e-94
emb|CAN76580.1| hypothetical protein VITISV_025642 [Vitis vinifera]   325   1e-86
gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]          276   8e-72
ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252...   266   1e-68

>gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1290

 Score =  363 bits (932), Expect = 5e-98
 Identities = 191/408 (46%), Positives = 252/408 (61%), Gaps = 3/408 (0%)
 Frame = -3

Query: 1216 NVSKIESFNGSHFKRWRERVFTALDVLNYAKYLTDTAPMEGSNDFERNQAAWLNGNKVCR 1037
            +VSKIE F G +F+RW+ERV T LD+   A  LT   P   S    +    W++ NKVCR
Sbjct: 32   DVSKIEVFTGQNFRRWQERVSTLLDMYGVAHALTTAKP--DSTTAAKQVDDWIHANKVCR 89

Query: 1036 HAILSTLSNEIFDIYCSNKNAHDIWESLNKKYIIEDAGTQKYAIGTFLKFHMREDRDVTS 857
            H +LS LSN++FD+Y S KNA DIW+SL  KY  ED   Q++ I  + ++ M + +D+  
Sbjct: 90   HTLLSVLSNDLFDVYASYKNAKDIWDSLILKYTAEDIVRQRFVIAKYYRWEMIKGKDIKI 149

Query: 856  QIHDFHVLINDLKTEGINLPETFVAGCLIEKLPESWKHYKNSMKHKRKQMTLEDVIIHIH 677
            QI+++H LI D+KTE I LP+ FV+  LIEKLP+SW  YK  +KH++KQM+L D+I HI 
Sbjct: 150  QINEYHKLIEDIKTESIKLPDEFVSELLIEKLPQSWTDYKQQLKHRQKQMSLSDLITHII 209

Query: 676  IEEKN-KTRDEVLSKEFHSKANIIEGNPXXXXXXXXXXXXXXXXXXXXKGTSFKRSGTGN 500
            IE+ N K      +K   +KAN+IE  P                    + +    +    
Sbjct: 210  IEDTNRKECAAAKAKALSAKANVIEDKPAPKRYEKKFDHKKKPNNKFSRPSGTNPTFKKK 269

Query: 499  GNCYVCGKPGHRAFQCRHKKDTDDPPNANLVEGDDIVAAVVSQVFIATGKRNWVLDSGAT 320
            GNC+VCGKPGH A QCRH+   D PP ANL EG+D + AVVSQV + T    WV+DSGAT
Sbjct: 270  GNCFVCGKPGHHAPQCRHRAKNDYPPKANLAEGEDTIVAVVSQVNLVTNVSKWVVDSGAT 329

Query: 319  RHVCGDVEAFSDYILVKD--EKVYMGDSRSVPVEXXXXXXXXXXXXXXXXXSNVLHVPEI 146
            RH+C +   F+ Y  V D  E+VY+GDSR+ PV                  ++VLHVP I
Sbjct: 330  RHICANRNVFTSYTSVGDGEEQVYLGDSRTTPVLGKGKVLLKLTSGKTLALNDVLHVPSI 389

Query: 145  RQNLISVSLLGKAGVKVTFESDKFVLTKN*GFVGKGYCNNGGLFMLNV 2
            R NL+SV+LL K GVKV+FESDK V+TKN  FVGKGYC+  GLF+LN+
Sbjct: 390  RVNLVSVALLSKVGVKVSFESDKIVITKNNVFVGKGYCDQ-GLFVLNI 436


>emb|CAN72171.1| hypothetical protein VITISV_036207 [Vitis vinifera]
          Length = 1096

 Score =  350 bits (898), Expect = 4e-94
 Identities = 195/408 (47%), Positives = 244/408 (59%), Gaps = 3/408 (0%)
 Frame = -3

Query: 1216 NVSKIESFNGSHFKRWRERVFTALDVLNYAKYLTDTAPMEGSNDFERNQAAWLNGNKVCR 1037
            + SKI+ FNG+ FKRW ERVF+A+DV+N    L D  P +GS+        W  GNK  R
Sbjct: 11   DTSKIDPFNGTFFKRWHERVFSAIDVVNLGHILIDPKPKDGSHLLP----TWETGNKQVR 66

Query: 1036 HAILSTLSNEIFDIYCSNKNAHDIWESLNKKYIIEDAGTQKYAIGTFLKFHMREDRDVTS 857
            HAI STLSNE+FDIYC  K A +IW+++NKKYI+EDAGT KY IG F  F M ED+DV+S
Sbjct: 67   HAIPSTLSNELFDIYCQFKVAKEIWDAMNKKYILEDAGTHKYVIGNFRNFQMTEDKDVSS 126

Query: 856  QIHDFHVLINDLKTEGINLPETFVAGCLIEKLPESWKHYKNSMKHKRKQMTLEDVIIHIH 677
            QIHD+H+LINDL  E I LPE F+ G L+E LPESWK YKN+MKHK KQM+LEDVIIHI 
Sbjct: 127  QIHDYHLLINDLAIEDIKLPEPFMVGYLVETLPESWKDYKNNMKHKMKQMSLEDVIIHIR 186

Query: 676  IEEKNKTRDEV-LSKEFHSKANIIEGNPXXXXXXXXXXXXXXXXXXXXKGTSFKRSGTGN 500
            IEE+N+ RD +  +KE  SKAN++E                                   
Sbjct: 187  IEEQNRNRDNIEKAKELSSKANVVEEK--------------------------------- 213

Query: 499  GNCYVCGKPGHRAFQCRHKKDTDDPPNANLVEGDDIVAAVVSQVFIATGKRNWVLDSGAT 320
                   KP +       K+       ANLVE   I   + S+V + T  + WV+D   T
Sbjct: 214  ------SKPKN-----NRKRIEKTSSKANLVETKVITTVISSEVSMVTNMKEWVVDYSVT 262

Query: 319  RHVCGDVEAFSDYILV--KDEKVYMGDSRSVPVEXXXXXXXXXXXXXXXXXSNVLHVPEI 146
            RH+CG+  AF+ Y  V  KDE+V++GDSRS  +                   +VLHV +I
Sbjct: 263  RHICGNRSAFTSYTTVKEKDEQVFIGDSRSTLMIGKGKFLLKLTSGKVLALCDVLHVLDI 322

Query: 145  RQNLISVSLLGKAGVKVTFESDKFVLTKN*GFVGKGYCNNGGLFMLNV 2
              N++ VSLLGKAGV++ F+SDK VLTKN  FVG GYCN  GLFMLNV
Sbjct: 323  CWNMVLVSLLGKAGVRILFDSDKLVLTKNDAFVGNGYCNQ-GLFMLNV 369


>emb|CAN76580.1| hypothetical protein VITISV_025642 [Vitis vinifera]
          Length = 1046

 Score =  325 bits (833), Expect = 1e-86
 Identities = 194/412 (47%), Positives = 242/412 (58%), Gaps = 7/412 (1%)
 Frame = -3

Query: 1216 NVSKIESFNGSHFKRWRERVFTALDVLNYAKYLTDTAPMEGSNDFERNQAAWLNGNKVCR 1037
            N SKI+ FNG+ FKRW+ERVF  +DV+     LTD    +GS+        W   NK  R
Sbjct: 11   NTSKIDPFNGTFFKRWQERVFATIDVVXLGHILTDPKLEDGSHLLP----TWETRNKQVR 66

Query: 1036 HAILSTLSNEIFDIYCSNKNAHDIWESLNKKYIIEDAGTQKYAIGTFLKFHMREDRDVTS 857
            HAILSTLS EIFDIY                Y+     TQKYAI  F  F M EDRDV+S
Sbjct: 67   HAILSTLSXEIFDIY----------------YVX----TQKYAIXNFRNFQMMEDRDVSS 106

Query: 856  QIHDFHVLINDLKTEGINLPETFVAGCLIEKLPESWKHYKNSMKHKRKQMTLEDVIIHIH 677
            QIHD+H+LINDL  E I LP  F+A  L+E L +SWK    +MKHKRKQM+LEDVIIHI 
Sbjct: 107  QIHDYHLLINDLAIEDIKLPGPFMASYLVETLLKSWKDXXXNMKHKRKQMSLEDVIIHIR 166

Query: 676  IEEKNKTRDEV-LSKEFHSKANIIEGNP---XXXXXXXXXXXXXXXXXXXXKGTSFKRSG 509
            IEE+N+ RD V  +KE  SKAN++E  P                       + T  KR  
Sbjct: 167  IEEQNRNRDNVEKAKELSSKANVVEEKPKPKNNRSRKQNFRTKPNASNKVQQSTIKKR-- 224

Query: 508  TGNGNCYVCGKPGHRAFQCRHKKDTD-DPPNANLVEGDDIVAAVVSQVFIATGKRNWVLD 332
               GNC+VCGK  H A QCRH+K T+     ANLV  + I   +  +V   T  ++WV++
Sbjct: 225  ---GNCFVCGKSRHHAAQCRHRKRTEKSNSKANLVXAEVITKVISFEVSTVTNMKDWVVB 281

Query: 331  SGATRHVCGDVEAFSDYILVK--DEKVYMGDSRSVPVEXXXXXXXXXXXXXXXXXSNVLH 158
            S  TRH+CG+  AF+ Y  +K  +E+V++GDSRS+ V                  S+VLH
Sbjct: 282  SRVTRHICGNKSAFTSYTTIKEGEEQVFIGDSRSIQVIGKGKVLIKLTSRKVLTLSDVLH 341

Query: 157  VPEIRQNLISVSLLGKAGVKVTFESDKFVLTKN*GFVGKGYCNNGGLFMLNV 2
            V +I  NL+S+SLLGKA V++ F+SDK VLTKN  FVGKGYCN  GLFMLNV
Sbjct: 342  VLDICWNLVSLSLLGKARVRILFDSDKIVLTKNDAFVGKGYCNQ-GLFMLNV 392


>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
          Length = 701

 Score =  276 bits (706), Expect = 8e-72
 Identities = 155/412 (37%), Positives = 241/412 (58%), Gaps = 12/412 (2%)
 Frame = -3

Query: 1201 ESFNGSHFKRWRERVFTALDVLNYAKYLTDTAPM--EGSNDFERNQA--AWLNGNKVCRH 1034
            E FNG +FKRW++++F  L  LN A++LT  AP   EG  D +   A  AW + + +C++
Sbjct: 43   EKFNGQNFKRWQQKMFFYLTTLNLARFLTKDAPKPKEGETDIQVASAIDAWHHSDFLCKN 102

Query: 1033 AILSTLSNEIFDIYCSNKNAHDIWESLNKKYIIEDAGTQKYAIGTFLKFHMREDRDVTSQ 854
             +++ LS+ ++++Y   K A ++WESL++KY  EDAGT+K+ +G FL F M + + V SQ
Sbjct: 103  YVMNGLSDSLYNVYIGKKTAKELWESLDRKYKTEDAGTKKFVVGRFLDFKMVDSKTVISQ 162

Query: 853  IHDFHVLINDLKTEGINLPETFVAGCLIEKLPESWKHYKNSMKHKRKQMTLEDVIIHIHI 674
            + +  ++++++  EG++L ETF    +IEKLP +WK +K+ +KHK+K+M +E +++ + I
Sbjct: 163  VQELQIILSEILAEGMHLSETFQVAAIIEKLPPAWKDFKSYLKHKQKEMNIEGLVVKLRI 222

Query: 673  EEKNKTRDEVLSKEFHSKANIIEGNPXXXXXXXXXXXXXXXXXXXXKGTSFKRSGTGNGN 494
            EE N+  + + +    +KAN +E  P                    KG   K+     G 
Sbjct: 223  EEDNRNAERIGAISM-AKANFVEHGP-----------KKKKKKLGPKGGISKKQTKFQGK 270

Query: 493  CYVCGKPGHRAFQCRHKKDTDDPPNANLVE------GDDIVAAVVSQV-FIATGKRNWVL 335
            CY C K GH+A  CR  K   +   AN+VE       D  ++AVV +V  + +  R W +
Sbjct: 271  CYNCDKMGHKASDCRLPKKKRE---ANVVENITQHVSDINLSAVVLEVNMVGSNPREWWI 327

Query: 334  DSGATRHVCGDVEAFSDYILVKD-EKVYMGDSRSVPVEXXXXXXXXXXXXXXXXXSNVLH 158
            D+GATRHVC D   F+ +    + EK++MG+S +  +E                 +NVL+
Sbjct: 328  DTGATRHVCSDKGLFTSFEAASNREKLFMGNSATSEIEGQGKVALKMTSGKELTLNNVLY 387

Query: 157  VPEIRQNLISVSLLGKAGVKVTFESDKFVLTKN*GFVGKGYCNNGGLFMLNV 2
            VPEIR+NL+S SLL K G ++ FESD  VL+KN  +VGKGY N+ GLF LNV
Sbjct: 388  VPEIRKNLVSGSLLNKHGFRMVFESDMVVLSKNGMYVGKGYVND-GLFKLNV 438


>ref|XP_003631792.1| PREDICTED: uncharacterized protein LOC100252656 [Vitis vinifera]
          Length = 946

 Score =  266 bits (679), Expect = 1e-68
 Identities = 149/418 (35%), Positives = 245/418 (58%), Gaps = 16/418 (3%)
 Frame = -3

Query: 1207 KIESFNGSHFKRWRERVFTALDVLNYAKYLTDTAPM--EGSNDFERNQA--AWLNGNKVC 1040
            K E F+G +FKRW++++   L  LN A++LT+ AP   E  +D +   A  AW + + +C
Sbjct: 40   KPEKFSGLNFKRWQQKMLFYLTTLNLARFLTEDAPKLKEDEHDIQVISAIDAWKHSDFLC 99

Query: 1039 RHAILSTLSNEIFDIYCSNKNAHDIWESLNKKYIIEDAGTQKYAIGTFLKFHMREDRDVT 860
            R+ +++ L++ ++++Y   K A ++WESL++KY  EDAG +K+ +G FL + M + + V 
Sbjct: 100  RNYVMNGLADSLYNVYSDKKIAKELWESLDRKYKTEDAGAKKFVVGRFLDYKMVDSKTVV 159

Query: 859  SQIHDFHVLINDLKTEGINLPETFVAGCLIEKLPESWKHYKNSMKHKRKQMTLEDVIIHI 680
            SQ+ +  V+++++  EG+ L ETF    +IEKLP +WK +KN +KHKRK+M++ED+II +
Sbjct: 160  SQVQELQVILHEIHAEGMMLSETFQVAAIIEKLPPAWKDFKNCLKHKRKEMSIEDLIIRL 219

Query: 679  HIEEKNKTRDEVLSKEFH----SKANIIEGNPXXXXXXXXXXXXXXXXXXXXKGTSFKRS 512
             IEE N+  ++   K  H    +KAN +E                             + 
Sbjct: 220  RIEEDNRRSEK---KGVHTLNEAKANFVEHGQSSKAKTNNNKGKGSKLGPKG---GISKK 273

Query: 511  GTGNGNCYVCGKPGHRAFQCRHKKDTDDPPNANLVE------GDDIVAAVVSQV-FIATG 353
                G C+ CGK GH++  CR  K  + P  AN+++       +  + AVVS+V  + + 
Sbjct: 274  PKFQGKCFNCGKQGHKSVDCRLPK-KNKPKEANVIDNITKNVSNIDLTAVVSEVNLVGSN 332

Query: 352  KRNWVLDSGATRHVCGDVEAFSDYILVKD-EKVYMGDSRSVPVEXXXXXXXXXXXXXXXX 176
             + W +D+GATRHVC D + FS +  +++ EKV+MG+S +  ++                
Sbjct: 333  PKEWWIDTGATRHVCSDKKMFSTFEPIENGEKVFMGNSTTSEIKGQGKVILKMTSGKELT 392

Query: 175  XSNVLHVPEIRQNLISVSLLGKAGVKVTFESDKFVLTKN*GFVGKGYCNNGGLFMLNV 2
             +NVL+VPEIR+NL+S SLL   G ++ FES+KFVL+K+  +VGKGY ++ G++ LNV
Sbjct: 393  LTNVLYVPEIRKNLVSGSLLNNHGFRLVFESNKFVLSKSGMYVGKGYMSD-GMWKLNV 449