BLASTX nr result
ID: Coptis24_contig00015305
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00015305 (1684 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADG36380.1| promoter-binding protein SPL9 [Vitis vinifera] 453 e-125 ref|XP_002278512.2| PREDICTED: promoter-binding protein SPL9 [Vi... 452 e-124 emb|CBI30036.3| unnamed protein product [Vitis vinifera] 429 e-117 ref|XP_002532343.1| LIGULELESS1 protein, putative [Ricinus commu... 394 e-107 gb|AEW23126.1| SQUAMOSA promoter binding protein-like protein [F... 389 e-105 >gb|ADG36380.1| promoter-binding protein SPL9 [Vitis vinifera] Length = 378 Score = 453 bits (1165), Expect = e-125 Identities = 232/365 (63%), Positives = 257/365 (70%), Gaps = 6/365 (1%) Frame = +3 Query: 240 LKFGKKIYFEDVGIGVSANKPSDGSSAVLATEGGGGAPVISKK--GRGVLQGGQPPRCQV 413 LKFG+KIYFED+G+G A + SS+ A GG P KK G GV+QGGQPPRCQV Sbjct: 24 LKFGQKIYFEDLGVGAPAKSGTGSSSSSAAGSGGRPPPAPPKKVRGSGVVQGGQPPRCQV 83 Query: 414 EGCKLDLSDVKAYYSRHKVCGMHSKTPRVIVNGLEQRFCQQCSRFHLLTEFDQGKRSCRR 593 EGCK+DLSD KAYYSRHKVCGMHSK+P VIV GLEQRFCQQCSRFH L EFDQGKRSCRR Sbjct: 84 EGCKVDLSDAKAYYSRHKVCGMHSKSPTVIVAGLEQRFCQQCSRFHQLAEFDQGKRSCRR 143 Query: 594 RLAGHNERRRKPQPGSLFTSRYGRLSPSFQENSSR-GGGFLMDFT---RQPGRDDWPIVK 761 RLAGHNERRRKP PGSL +SRYGRLS S ENSSR GGGFLMDF R P RD WP + Sbjct: 144 RLAGHNERRRKPPPGSLLSSRYGRLSSSIFENSSRVGGGFLMDFAAYPRHPERDTWPTTR 203 Query: 762 TGNWADGNQPTPTGKLLPHQWQGDPENPPAIVYSQSSQPYLQGAVGGTVFSSTRIPSGEC 941 + GNQ T G+ LPH WQ + ENP +LQG+ GGT F IPSGEC Sbjct: 204 ASDRVPGNQTTAMGRFLPHPWQSNSENP----------LFLQGSAGGTSFHGPGIPSGEC 253 Query: 942 FAGVSDSSCALSLLSNQPWGPRSHTSXXXXXXXXXGEGISMAQSTATHSAAVTNFTSNSW 1121 F G SDSSCALSLLSNQPW R+ S EG SMAQ TA HSAA+ +F S SW Sbjct: 254 FTGASDSSCALSLLSNQPWSSRNRASGLGANSFMNPEGASMAQPTAPHSAAINHFPSTSW 313 Query: 1122 SFKGNEVGGSSQEMPHDFGLGQVSQSMNNHFSGELEIAQQGDRQYVELGNSRGYGSSTRQ 1301 FKGNE SSQEMP D GLGQ+SQ +N+ FSG E+ QQ RQY+EL +SR Y SST+Q Sbjct: 314 DFKGNEGSSSSQEMPPDLGLGQISQPINSQFSGGGELPQQSGRQYMELEHSRAYDSSTQQ 373 Query: 1302 AHWSL 1316 HWSL Sbjct: 374 MHWSL 378 >ref|XP_002278512.2| PREDICTED: promoter-binding protein SPL9 [Vitis vinifera] Length = 379 Score = 452 bits (1163), Expect = e-124 Identities = 233/367 (63%), Positives = 259/367 (70%), Gaps = 8/367 (2%) Frame = +3 Query: 240 LKFGKKIYFEDVGIGVSANKPSDGSSAVLATEGGGG----APVISKKGRGVLQGGQPPRC 407 LKFG+KIYFED+G+G A K GSS+ + G GG AP +G GV+QGGQPPRC Sbjct: 24 LKFGQKIYFEDLGVGAPA-KSGTGSSSSSSAAGSGGRPPPAPPKKVRGSGVVQGGQPPRC 82 Query: 408 QVEGCKLDLSDVKAYYSRHKVCGMHSKTPRVIVNGLEQRFCQQCSRFHLLTEFDQGKRSC 587 QVEGCK+DLSD KAYYSRHKVCGMHSK+P VIV GLEQRFCQQCSRFH L EFDQGKRSC Sbjct: 83 QVEGCKVDLSDAKAYYSRHKVCGMHSKSPTVIVAGLEQRFCQQCSRFHQLAEFDQGKRSC 142 Query: 588 RRRLAGHNERRRKPQPGSLFTSRYGRLSPSFQENSSR-GGGFLMDFT---RQPGRDDWPI 755 RRRLAGHNERRRKP PGSL +SRYGRLS S ENSSR GGGFLMDF R P RD WP Sbjct: 143 RRRLAGHNERRRKPPPGSLLSSRYGRLSSSIFENSSRVGGGFLMDFAAYPRHPERDTWPT 202 Query: 756 VKTGNWADGNQPTPTGKLLPHQWQGDPENPPAIVYSQSSQPYLQGAVGGTVFSSTRIPSG 935 + + GNQ T G+ LPH WQ + ENP +LQG+ GGT F IPSG Sbjct: 203 TRASDRVPGNQTTAMGRFLPHPWQSNSENP----------LFLQGSAGGTSFHGPGIPSG 252 Query: 936 ECFAGVSDSSCALSLLSNQPWGPRSHTSXXXXXXXXXGEGISMAQSTATHSAAVTNFTSN 1115 ECF G SDSSCALSLLSNQPW R+ S EG SMAQ TA HSAA+ +F S Sbjct: 253 ECFTGASDSSCALSLLSNQPWSSRNRASGLGANSFMNPEGASMAQPTAPHSAAINHFPST 312 Query: 1116 SWSFKGNEVGGSSQEMPHDFGLGQVSQSMNNHFSGELEIAQQGDRQYVELGNSRGYGSST 1295 SW FKGNE SSQEMP D GLGQ+SQ +N+ FSG E+ QQ RQY+EL +SR Y SST Sbjct: 313 SWDFKGNEGSSSSQEMPPDLGLGQISQPINSQFSGGGELPQQSGRQYMELEHSRAYDSST 372 Query: 1296 RQAHWSL 1316 +Q HWSL Sbjct: 373 QQMHWSL 379 >emb|CBI30036.3| unnamed protein product [Vitis vinifera] Length = 349 Score = 429 bits (1102), Expect = e-117 Identities = 222/363 (61%), Positives = 245/363 (67%), Gaps = 4/363 (1%) Frame = +3 Query: 240 LKFGKKIYFEDVGIGVSANKPSDGSSAVLATEGGGGAPVISKKGRGVLQGGQPPRCQVEG 419 LKFG+KIYFED+G +G GV+QGGQPPRCQVEG Sbjct: 24 LKFGQKIYFEDLG---------------------------KVRGSGVVQGGQPPRCQVEG 56 Query: 420 CKLDLSDVKAYYSRHKVCGMHSKTPRVIVNGLEQRFCQQCSRFHLLTEFDQGKRSCRRRL 599 CK+DLSD KAYYSRHKVCGMHSK+P VIV GLEQRFCQQCSRFH L EFDQGKRSCRRRL Sbjct: 57 CKVDLSDAKAYYSRHKVCGMHSKSPTVIVAGLEQRFCQQCSRFHQLAEFDQGKRSCRRRL 116 Query: 600 AGHNERRRKPQPGSLFTSRYGRLSPSFQENSSR-GGGFLMDFT---RQPGRDDWPIVKTG 767 AGHNERRRKP PGSL +SRYGRLS S ENSSR GGGFLMDF R P RD WP + Sbjct: 117 AGHNERRRKPPPGSLLSSRYGRLSSSIFENSSRVGGGFLMDFAAYPRHPERDTWPTTRAS 176 Query: 768 NWADGNQPTPTGKLLPHQWQGDPENPPAIVYSQSSQPYLQGAVGGTVFSSTRIPSGECFA 947 + GNQ T G+ LPH WQ + ENP +LQG+ GGT F IPSGECF Sbjct: 177 DRVPGNQTTAMGRFLPHPWQSNSENP----------LFLQGSAGGTSFHGPGIPSGECFT 226 Query: 948 GVSDSSCALSLLSNQPWGPRSHTSXXXXXXXXXGEGISMAQSTATHSAAVTNFTSNSWSF 1127 G SDSSCALSLLSNQPW R+ S EG SMAQ TA HSAA+ +F S SW F Sbjct: 227 GASDSSCALSLLSNQPWSSRNRASGLGANSFMNPEGASMAQPTAPHSAAINHFPSTSWDF 286 Query: 1128 KGNEVGGSSQEMPHDFGLGQVSQSMNNHFSGELEIAQQGDRQYVELGNSRGYGSSTRQAH 1307 KGNE SSQEMP D GLGQ+SQ +N+ FSG E+ QQ RQY+EL +SR Y SST+Q H Sbjct: 287 KGNEGSSSSQEMPPDLGLGQISQPINSQFSGGGELPQQSGRQYMELEHSRAYDSSTQQMH 346 Query: 1308 WSL 1316 WSL Sbjct: 347 WSL 349 >ref|XP_002532343.1| LIGULELESS1 protein, putative [Ricinus communis] gi|223527960|gb|EEF30045.1| LIGULELESS1 protein, putative [Ricinus communis] Length = 349 Score = 394 bits (1012), Expect = e-107 Identities = 206/352 (58%), Positives = 239/352 (67%), Gaps = 5/352 (1%) Frame = +3 Query: 276 GIGVSANKPSDGSSAVLATEGGGGAPVISKKGRGVLQGGQPPRCQVEGCKLDLSDVKAYY 455 G G S GSS+ + G GAP ++K G Q QPPRCQVEGCK+DLSD KAYY Sbjct: 12 GSGAPVKSSSPGSSS---SSSGSGAP--ARKVHGGQQ--QPPRCQVEGCKVDLSDAKAYY 64 Query: 456 SRHKVCGMHSKTPRVIVNGLEQRFCQQCSRFHLLTEFDQGKRSCRRRLAGHNERRRKPQP 635 SRHKVCGMHSK+P+VIV GLEQRFCQQCSRFH L EFDQGKRSCRRRLAGHNERRRKP P Sbjct: 65 SRHKVCGMHSKSPKVIVAGLEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPP 124 Query: 636 GSLFTSRYGRLSPSFQENSSRGGGFLMDFTRQP---GRDDWPIVKTGNWADGNQPTPTGK 806 GSL +SRY RLS + +NSSR GGFL+DF+ P RD WP + GN T G+ Sbjct: 125 GSLLSSRYSRLSSTVFDNSSRAGGFLVDFSAYPRLSARDAWPSARPSERVPGNHTTGAGR 184 Query: 807 LLPHQWQGDPENPPAIVYSQSSQPYLQGAVGGTVFSSTRIPSGECFAGVS--DSSCALSL 980 +P+ WQ +NPP S YLQG+ GT FSS+ PSGECF GVS DSSCALSL Sbjct: 185 SIPNPWQTSSQNPP-------SNLYLQGSASGTGFSSSENPSGECFTGVSIADSSCALSL 237 Query: 981 LSNQPWGPRSHTSXXXXXXXXXGEGISMAQSTATHSAAVTNFTSNSWSFKGNEVGGSSQE 1160 LSNQPWG R+ S +G +AQST H AAV + + SW FKG+E G SS E Sbjct: 238 LSNQPWGSRNQASGLGVKNLVDPQGAPLAQSTNPHGAAVNQYPNPSWGFKGSEAGSSSHE 297 Query: 1161 MPHDFGLGQVSQSMNNHFSGELEIAQQGDRQYVELGNSRGYGSSTRQAHWSL 1316 M D GLGQ+SQ N HF+GELE++QQ RQY+EL +SR Y SST+ +WSL Sbjct: 298 MCPDLGLGQISQPPNGHFAGELELSQQNRRQYMELDHSRAYDSSTQHMNWSL 349 >gb|AEW23126.1| SQUAMOSA promoter binding protein-like protein [Fragaria x ananassa] Length = 380 Score = 389 bits (999), Expect = e-105 Identities = 210/367 (57%), Positives = 242/367 (65%), Gaps = 8/367 (2%) Frame = +3 Query: 240 LKFGKKIYFEDVGIGVSANKPSDGSSAVLATEGGGGAPVISKKGRGVLQGGQPPRCQVEG 419 LKFG+KIYFED + + S + A GGG G + GQPPRCQVEG Sbjct: 33 LKFGRKIYFEDGTLAPPKSGSSSSAGAKKQRSSGGG---------GFVHHGQPPRCQVEG 83 Query: 420 CKLDLSDVKAYYSRHKVCGMHSKTPRVIVNGLEQRFCQQCSRFHLLTEFDQGKRSCRRRL 599 C +DLSDVKAYYSRHKVC MHSKTP V+V GLEQRFCQQCSRFH L EFDQGKRSCRRRL Sbjct: 84 CNVDLSDVKAYYSRHKVCAMHSKTPTVVVAGLEQRFCQQCSRFHQLPEFDQGKRSCRRRL 143 Query: 600 AGHNERRRKPQPGSLFTSRYGRLSPSFQENSSRGGGFLMDFTRQP--GRDDWPIVKTGNW 773 AGHNERRRKPQPGS+ ++R+GRLS S ENS++ G FLMDFT P GRD W +T Sbjct: 144 AGHNERRRKPQPGSMMSTRFGRLSSSIYENSNQVGSFLMDFTAYPRDGRDAWATARTSER 203 Query: 774 ADGNQP-TPTGKLLPHQWQGDPENPPAIVYSQSSQPYLQGAVGGTVFSSTRIPSGECFAG 950 NQ T TGK L HQWQ +PEN S YLQG+ GGT + IP GEC G Sbjct: 204 PPANQTVTATGKFLQHQWQSNPEN-------NRSNLYLQGSAGGTSYPGPGIPPGECVTG 256 Query: 951 VSDSSCALSLLSNQPWGPRSHTSXXXXXXXXXGEGISMAQSTATHSAAVTNFTSNSWSFK 1130 V+DSSCALSLLS+QPW R+ +G MAQS A ++ V F + SW FK Sbjct: 257 VTDSSCALSLLSSQPWASRNR--GVGTNAFLNTQGAPMAQSIA-NAGPVNPFPTTSWGFK 313 Query: 1131 GNEVGGSSQEMPHDFGLGQVSQSMNNHFSGELEIAQQGDRQY-VELGNSRGYG----SST 1295 GNE G SS EM D GLGQ SQ +N+H+SGELE++QQG RQ +EL NSRGY SS+ Sbjct: 314 GNEAGSSSHEMLPDLGLGQFSQPLNSHYSGELELSQQGRRQQNMELRNSRGYSRGYDSSS 373 Query: 1296 RQAHWSL 1316 +Q HWSL Sbjct: 374 QQIHWSL 380