BLASTX nr result

ID: Coptis24_contig00015305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015305
         (1684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADG36380.1| promoter-binding protein SPL9 [Vitis vinifera]         453   e-125
ref|XP_002278512.2| PREDICTED: promoter-binding protein SPL9 [Vi...   452   e-124
emb|CBI30036.3| unnamed protein product [Vitis vinifera]              429   e-117
ref|XP_002532343.1| LIGULELESS1 protein, putative [Ricinus commu...   394   e-107
gb|AEW23126.1| SQUAMOSA promoter binding protein-like protein [F...   389   e-105

>gb|ADG36380.1| promoter-binding protein SPL9 [Vitis vinifera]
          Length = 378

 Score =  453 bits (1165), Expect = e-125
 Identities = 232/365 (63%), Positives = 257/365 (70%), Gaps = 6/365 (1%)
 Frame = +3

Query: 240  LKFGKKIYFEDVGIGVSANKPSDGSSAVLATEGGGGAPVISKK--GRGVLQGGQPPRCQV 413
            LKFG+KIYFED+G+G  A   +  SS+  A  GG   P   KK  G GV+QGGQPPRCQV
Sbjct: 24   LKFGQKIYFEDLGVGAPAKSGTGSSSSSAAGSGGRPPPAPPKKVRGSGVVQGGQPPRCQV 83

Query: 414  EGCKLDLSDVKAYYSRHKVCGMHSKTPRVIVNGLEQRFCQQCSRFHLLTEFDQGKRSCRR 593
            EGCK+DLSD KAYYSRHKVCGMHSK+P VIV GLEQRFCQQCSRFH L EFDQGKRSCRR
Sbjct: 84   EGCKVDLSDAKAYYSRHKVCGMHSKSPTVIVAGLEQRFCQQCSRFHQLAEFDQGKRSCRR 143

Query: 594  RLAGHNERRRKPQPGSLFTSRYGRLSPSFQENSSR-GGGFLMDFT---RQPGRDDWPIVK 761
            RLAGHNERRRKP PGSL +SRYGRLS S  ENSSR GGGFLMDF    R P RD WP  +
Sbjct: 144  RLAGHNERRRKPPPGSLLSSRYGRLSSSIFENSSRVGGGFLMDFAAYPRHPERDTWPTTR 203

Query: 762  TGNWADGNQPTPTGKLLPHQWQGDPENPPAIVYSQSSQPYLQGAVGGTVFSSTRIPSGEC 941
              +   GNQ T  G+ LPH WQ + ENP           +LQG+ GGT F    IPSGEC
Sbjct: 204  ASDRVPGNQTTAMGRFLPHPWQSNSENP----------LFLQGSAGGTSFHGPGIPSGEC 253

Query: 942  FAGVSDSSCALSLLSNQPWGPRSHTSXXXXXXXXXGEGISMAQSTATHSAAVTNFTSNSW 1121
            F G SDSSCALSLLSNQPW  R+  S          EG SMAQ TA HSAA+ +F S SW
Sbjct: 254  FTGASDSSCALSLLSNQPWSSRNRASGLGANSFMNPEGASMAQPTAPHSAAINHFPSTSW 313

Query: 1122 SFKGNEVGGSSQEMPHDFGLGQVSQSMNNHFSGELEIAQQGDRQYVELGNSRGYGSSTRQ 1301
             FKGNE   SSQEMP D GLGQ+SQ +N+ FSG  E+ QQ  RQY+EL +SR Y SST+Q
Sbjct: 314  DFKGNEGSSSSQEMPPDLGLGQISQPINSQFSGGGELPQQSGRQYMELEHSRAYDSSTQQ 373

Query: 1302 AHWSL 1316
             HWSL
Sbjct: 374  MHWSL 378


>ref|XP_002278512.2| PREDICTED: promoter-binding protein SPL9 [Vitis vinifera]
          Length = 379

 Score =  452 bits (1163), Expect = e-124
 Identities = 233/367 (63%), Positives = 259/367 (70%), Gaps = 8/367 (2%)
 Frame = +3

Query: 240  LKFGKKIYFEDVGIGVSANKPSDGSSAVLATEGGGG----APVISKKGRGVLQGGQPPRC 407
            LKFG+KIYFED+G+G  A K   GSS+  +  G GG    AP    +G GV+QGGQPPRC
Sbjct: 24   LKFGQKIYFEDLGVGAPA-KSGTGSSSSSSAAGSGGRPPPAPPKKVRGSGVVQGGQPPRC 82

Query: 408  QVEGCKLDLSDVKAYYSRHKVCGMHSKTPRVIVNGLEQRFCQQCSRFHLLTEFDQGKRSC 587
            QVEGCK+DLSD KAYYSRHKVCGMHSK+P VIV GLEQRFCQQCSRFH L EFDQGKRSC
Sbjct: 83   QVEGCKVDLSDAKAYYSRHKVCGMHSKSPTVIVAGLEQRFCQQCSRFHQLAEFDQGKRSC 142

Query: 588  RRRLAGHNERRRKPQPGSLFTSRYGRLSPSFQENSSR-GGGFLMDFT---RQPGRDDWPI 755
            RRRLAGHNERRRKP PGSL +SRYGRLS S  ENSSR GGGFLMDF    R P RD WP 
Sbjct: 143  RRRLAGHNERRRKPPPGSLLSSRYGRLSSSIFENSSRVGGGFLMDFAAYPRHPERDTWPT 202

Query: 756  VKTGNWADGNQPTPTGKLLPHQWQGDPENPPAIVYSQSSQPYLQGAVGGTVFSSTRIPSG 935
             +  +   GNQ T  G+ LPH WQ + ENP           +LQG+ GGT F    IPSG
Sbjct: 203  TRASDRVPGNQTTAMGRFLPHPWQSNSENP----------LFLQGSAGGTSFHGPGIPSG 252

Query: 936  ECFAGVSDSSCALSLLSNQPWGPRSHTSXXXXXXXXXGEGISMAQSTATHSAAVTNFTSN 1115
            ECF G SDSSCALSLLSNQPW  R+  S          EG SMAQ TA HSAA+ +F S 
Sbjct: 253  ECFTGASDSSCALSLLSNQPWSSRNRASGLGANSFMNPEGASMAQPTAPHSAAINHFPST 312

Query: 1116 SWSFKGNEVGGSSQEMPHDFGLGQVSQSMNNHFSGELEIAQQGDRQYVELGNSRGYGSST 1295
            SW FKGNE   SSQEMP D GLGQ+SQ +N+ FSG  E+ QQ  RQY+EL +SR Y SST
Sbjct: 313  SWDFKGNEGSSSSQEMPPDLGLGQISQPINSQFSGGGELPQQSGRQYMELEHSRAYDSST 372

Query: 1296 RQAHWSL 1316
            +Q HWSL
Sbjct: 373  QQMHWSL 379


>emb|CBI30036.3| unnamed protein product [Vitis vinifera]
          Length = 349

 Score =  429 bits (1102), Expect = e-117
 Identities = 222/363 (61%), Positives = 245/363 (67%), Gaps = 4/363 (1%)
 Frame = +3

Query: 240  LKFGKKIYFEDVGIGVSANKPSDGSSAVLATEGGGGAPVISKKGRGVLQGGQPPRCQVEG 419
            LKFG+KIYFED+G                             +G GV+QGGQPPRCQVEG
Sbjct: 24   LKFGQKIYFEDLG---------------------------KVRGSGVVQGGQPPRCQVEG 56

Query: 420  CKLDLSDVKAYYSRHKVCGMHSKTPRVIVNGLEQRFCQQCSRFHLLTEFDQGKRSCRRRL 599
            CK+DLSD KAYYSRHKVCGMHSK+P VIV GLEQRFCQQCSRFH L EFDQGKRSCRRRL
Sbjct: 57   CKVDLSDAKAYYSRHKVCGMHSKSPTVIVAGLEQRFCQQCSRFHQLAEFDQGKRSCRRRL 116

Query: 600  AGHNERRRKPQPGSLFTSRYGRLSPSFQENSSR-GGGFLMDFT---RQPGRDDWPIVKTG 767
            AGHNERRRKP PGSL +SRYGRLS S  ENSSR GGGFLMDF    R P RD WP  +  
Sbjct: 117  AGHNERRRKPPPGSLLSSRYGRLSSSIFENSSRVGGGFLMDFAAYPRHPERDTWPTTRAS 176

Query: 768  NWADGNQPTPTGKLLPHQWQGDPENPPAIVYSQSSQPYLQGAVGGTVFSSTRIPSGECFA 947
            +   GNQ T  G+ LPH WQ + ENP           +LQG+ GGT F    IPSGECF 
Sbjct: 177  DRVPGNQTTAMGRFLPHPWQSNSENP----------LFLQGSAGGTSFHGPGIPSGECFT 226

Query: 948  GVSDSSCALSLLSNQPWGPRSHTSXXXXXXXXXGEGISMAQSTATHSAAVTNFTSNSWSF 1127
            G SDSSCALSLLSNQPW  R+  S          EG SMAQ TA HSAA+ +F S SW F
Sbjct: 227  GASDSSCALSLLSNQPWSSRNRASGLGANSFMNPEGASMAQPTAPHSAAINHFPSTSWDF 286

Query: 1128 KGNEVGGSSQEMPHDFGLGQVSQSMNNHFSGELEIAQQGDRQYVELGNSRGYGSSTRQAH 1307
            KGNE   SSQEMP D GLGQ+SQ +N+ FSG  E+ QQ  RQY+EL +SR Y SST+Q H
Sbjct: 287  KGNEGSSSSQEMPPDLGLGQISQPINSQFSGGGELPQQSGRQYMELEHSRAYDSSTQQMH 346

Query: 1308 WSL 1316
            WSL
Sbjct: 347  WSL 349


>ref|XP_002532343.1| LIGULELESS1 protein, putative [Ricinus communis]
            gi|223527960|gb|EEF30045.1| LIGULELESS1 protein, putative
            [Ricinus communis]
          Length = 349

 Score =  394 bits (1012), Expect = e-107
 Identities = 206/352 (58%), Positives = 239/352 (67%), Gaps = 5/352 (1%)
 Frame = +3

Query: 276  GIGVSANKPSDGSSAVLATEGGGGAPVISKKGRGVLQGGQPPRCQVEGCKLDLSDVKAYY 455
            G G      S GSS+   +  G GAP  ++K  G  Q  QPPRCQVEGCK+DLSD KAYY
Sbjct: 12   GSGAPVKSSSPGSSS---SSSGSGAP--ARKVHGGQQ--QPPRCQVEGCKVDLSDAKAYY 64

Query: 456  SRHKVCGMHSKTPRVIVNGLEQRFCQQCSRFHLLTEFDQGKRSCRRRLAGHNERRRKPQP 635
            SRHKVCGMHSK+P+VIV GLEQRFCQQCSRFH L EFDQGKRSCRRRLAGHNERRRKP P
Sbjct: 65   SRHKVCGMHSKSPKVIVAGLEQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPP 124

Query: 636  GSLFTSRYGRLSPSFQENSSRGGGFLMDFTRQP---GRDDWPIVKTGNWADGNQPTPTGK 806
            GSL +SRY RLS +  +NSSR GGFL+DF+  P    RD WP  +      GN  T  G+
Sbjct: 125  GSLLSSRYSRLSSTVFDNSSRAGGFLVDFSAYPRLSARDAWPSARPSERVPGNHTTGAGR 184

Query: 807  LLPHQWQGDPENPPAIVYSQSSQPYLQGAVGGTVFSSTRIPSGECFAGVS--DSSCALSL 980
             +P+ WQ   +NPP       S  YLQG+  GT FSS+  PSGECF GVS  DSSCALSL
Sbjct: 185  SIPNPWQTSSQNPP-------SNLYLQGSASGTGFSSSENPSGECFTGVSIADSSCALSL 237

Query: 981  LSNQPWGPRSHTSXXXXXXXXXGEGISMAQSTATHSAAVTNFTSNSWSFKGNEVGGSSQE 1160
            LSNQPWG R+  S          +G  +AQST  H AAV  + + SW FKG+E G SS E
Sbjct: 238  LSNQPWGSRNQASGLGVKNLVDPQGAPLAQSTNPHGAAVNQYPNPSWGFKGSEAGSSSHE 297

Query: 1161 MPHDFGLGQVSQSMNNHFSGELEIAQQGDRQYVELGNSRGYGSSTRQAHWSL 1316
            M  D GLGQ+SQ  N HF+GELE++QQ  RQY+EL +SR Y SST+  +WSL
Sbjct: 298  MCPDLGLGQISQPPNGHFAGELELSQQNRRQYMELDHSRAYDSSTQHMNWSL 349


>gb|AEW23126.1| SQUAMOSA promoter binding protein-like protein [Fragaria x ananassa]
          Length = 380

 Score =  389 bits (999), Expect = e-105
 Identities = 210/367 (57%), Positives = 242/367 (65%), Gaps = 8/367 (2%)
 Frame = +3

Query: 240  LKFGKKIYFEDVGIGVSANKPSDGSSAVLATEGGGGAPVISKKGRGVLQGGQPPRCQVEG 419
            LKFG+KIYFED  +    +  S  + A      GGG         G +  GQPPRCQVEG
Sbjct: 33   LKFGRKIYFEDGTLAPPKSGSSSSAGAKKQRSSGGG---------GFVHHGQPPRCQVEG 83

Query: 420  CKLDLSDVKAYYSRHKVCGMHSKTPRVIVNGLEQRFCQQCSRFHLLTEFDQGKRSCRRRL 599
            C +DLSDVKAYYSRHKVC MHSKTP V+V GLEQRFCQQCSRFH L EFDQGKRSCRRRL
Sbjct: 84   CNVDLSDVKAYYSRHKVCAMHSKTPTVVVAGLEQRFCQQCSRFHQLPEFDQGKRSCRRRL 143

Query: 600  AGHNERRRKPQPGSLFTSRYGRLSPSFQENSSRGGGFLMDFTRQP--GRDDWPIVKTGNW 773
            AGHNERRRKPQPGS+ ++R+GRLS S  ENS++ G FLMDFT  P  GRD W   +T   
Sbjct: 144  AGHNERRRKPQPGSMMSTRFGRLSSSIYENSNQVGSFLMDFTAYPRDGRDAWATARTSER 203

Query: 774  ADGNQP-TPTGKLLPHQWQGDPENPPAIVYSQSSQPYLQGAVGGTVFSSTRIPSGECFAG 950
               NQ  T TGK L HQWQ +PEN         S  YLQG+ GGT +    IP GEC  G
Sbjct: 204  PPANQTVTATGKFLQHQWQSNPEN-------NRSNLYLQGSAGGTSYPGPGIPPGECVTG 256

Query: 951  VSDSSCALSLLSNQPWGPRSHTSXXXXXXXXXGEGISMAQSTATHSAAVTNFTSNSWSFK 1130
            V+DSSCALSLLS+QPW  R+             +G  MAQS A ++  V  F + SW FK
Sbjct: 257  VTDSSCALSLLSSQPWASRNR--GVGTNAFLNTQGAPMAQSIA-NAGPVNPFPTTSWGFK 313

Query: 1131 GNEVGGSSQEMPHDFGLGQVSQSMNNHFSGELEIAQQGDRQY-VELGNSRGYG----SST 1295
            GNE G SS EM  D GLGQ SQ +N+H+SGELE++QQG RQ  +EL NSRGY     SS+
Sbjct: 314  GNEAGSSSHEMLPDLGLGQFSQPLNSHYSGELELSQQGRRQQNMELRNSRGYSRGYDSSS 373

Query: 1296 RQAHWSL 1316
            +Q HWSL
Sbjct: 374  QQIHWSL 380


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