BLASTX nr result

ID: Coptis24_contig00015205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015205
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324888.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-34
ref|XP_002519905.1| Flotillin-1, putative [Ricinus communis] gi|...   147   7e-34
ref|XP_004138849.1| PREDICTED: LOW QUALITY PROTEIN: flotillin-li...   147   9e-34
emb|CAN77054.1| hypothetical protein VITISV_002157 [Vitis vinifera]   147   1e-33
ref|NP_001237748.1| nodulin [Glycine max] gi|3851530|gb|AAC72337...   146   2e-33

>ref|XP_002324888.1| predicted protein [Populus trichocarpa] gi|222866322|gb|EEF03453.1|
           predicted protein [Populus trichocarpa]
          Length = 483

 Score =  148 bits (374), Expect = 4e-34
 Identities = 73/97 (75%), Positives = 90/97 (92%)
 Frame = -2

Query: 292 REGQTLQNAAKIDAETKVISTQRQGEGTKEEIKVKTAVKIFENKREADIAEANAELSMKK 113
           REGQTLQNAA+IDAETK+I+TQRQG+G KEEIKVKT VKI+EN REA++AEANA+L+ KK
Sbjct: 194 REGQTLQNAARIDAETKIIATQRQGDGKKEEIKVKTEVKIYENHREAEVAEANADLAKKK 253

Query: 112 AEWSRQSRLAEVEAVKAVAIREAELQRDVEIMNALTR 2
           A WS+++++AEVEA KAV++REAELQR+VE MNALTR
Sbjct: 254 AGWSKEAQVAEVEATKAVSLREAELQREVERMNALTR 290


>ref|XP_002519905.1| Flotillin-1, putative [Ricinus communis]
           gi|223540951|gb|EEF42509.1| Flotillin-1, putative
           [Ricinus communis]
          Length = 481

 Score =  147 bits (372), Expect = 7e-34
 Identities = 73/97 (75%), Positives = 89/97 (91%)
 Frame = -2

Query: 292 REGQTLQNAAKIDAETKVISTQRQGEGTKEEIKVKTAVKIFENKREADIAEANAELSMKK 113
           REGQTLQNAAKIDAETK+I+TQRQGEG KEEIKVKT VKI+EN+REA++AE NAEL+ KK
Sbjct: 194 REGQTLQNAAKIDAETKIIATQRQGEGKKEEIKVKTEVKIYENQREAEVAEVNAELAKKK 253

Query: 112 AEWSRQSRLAEVEAVKAVAIREAELQRDVEIMNALTR 2
           A W++++++AEVEA KAV +R+AELQR+VE MNALTR
Sbjct: 254 AGWAKEAQVAEVEASKAVTLRDAELQREVERMNALTR 290


>ref|XP_004138849.1| PREDICTED: LOW QUALITY PROTEIN: flotillin-like protein 4-like
           [Cucumis sativus] gi|449493412|ref|XP_004159281.1|
           PREDICTED: LOW QUALITY PROTEIN: flotillin-like protein
           4-like [Cucumis sativus]
          Length = 841

 Score =  147 bits (371), Expect = 9e-34
 Identities = 71/96 (73%), Positives = 89/96 (92%)
 Frame = -2

Query: 292 REGQTLQNAAKIDAETKVISTQRQGEGTKEEIKVKTAVKIFENKREADIAEANAELSMKK 113
           REGQTLQNAAKIDAETK+I+TQRQG+G KEEIKVK  VK+FEN+REA++AEANAEL+ KK
Sbjct: 194 REGQTLQNAAKIDAETKIIATQRQGQGKKEEIKVKAEVKVFENEREAEVAEANAELAKKK 253

Query: 112 AEWSRQSRLAEVEAVKAVAIREAELQRDVEIMNALT 5
           A W+R +++AEVEA KAVA+REA+LQ++VE+MNA+T
Sbjct: 254 AAWTRAAQVAEVEAAKAVALREAQLQKEVEMMNAMT 289



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/73 (47%), Positives = 51/73 (69%), Gaps = 1/73 (1%)
 Frame = -2

Query: 220 GEGTKEEIKVKTAVKIFE-NKREADIAEANAELSMKKAEWSRQSRLAEVEAVKAVAIREA 44
           G+ T++E   +  V + E N   A++ EANAEL+ KKA  ++ S +AEVEA KAV++REA
Sbjct: 577 GQKTQQEASNQAKVDVAEANAEVAEVVEANAELAKKKAILAKGSEMAEVEAAKAVSLREA 636

Query: 43  ELQRDVEIMNALT 5
           + ++ VE MNALT
Sbjct: 637 DQKKKVEKMNALT 649


>emb|CAN77054.1| hypothetical protein VITISV_002157 [Vitis vinifera]
          Length = 488

 Score =  147 bits (370), Expect = 1e-33
 Identities = 71/98 (72%), Positives = 90/98 (91%)
 Frame = -2

Query: 295 LREGQTLQNAAKIDAETKVISTQRQGEGTKEEIKVKTAVKIFENKREADIAEANAELSMK 116
           LREGQTLQNAAKIDAETK+ISTQRQG+G KEEI+VKT +K++EN+REA++AE N+ L+ K
Sbjct: 193 LREGQTLQNAAKIDAETKIISTQRQGDGKKEEIRVKTEIKVYENQREAEVAEVNSVLAKK 252

Query: 115 KAEWSRQSRLAEVEAVKAVAIREAELQRDVEIMNALTR 2
           KA W++++++AEVEA KAVA+REAELQR+VE MNALTR
Sbjct: 253 KAVWTKEAQVAEVEAAKAVALREAELQREVERMNALTR 290


>ref|NP_001237748.1| nodulin [Glycine max] gi|3851530|gb|AAC72337.1| nodulin [Glycine
           max]
          Length = 476

 Score =  146 bits (369), Expect = 2e-33
 Identities = 73/97 (75%), Positives = 89/97 (91%)
 Frame = -2

Query: 292 REGQTLQNAAKIDAETKVISTQRQGEGTKEEIKVKTAVKIFENKREADIAEANAELSMKK 113
           R+GQTLQNAAKIDAETK+ISTQRQG+G KEEIKV+T VK+FEN+REA +AEAN+EL+ KK
Sbjct: 194 RQGQTLQNAAKIDAETKIISTQRQGDGKKEEIKVRTEVKVFENEREAVVAEANSELAKKK 253

Query: 112 AEWSRQSRLAEVEAVKAVAIREAELQRDVEIMNALTR 2
           A W++ +++AEVEA KAVA+REAELQR+VE MNALTR
Sbjct: 254 AVWAQTAQVAEVEAAKAVALREAELQREVERMNALTR 290


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