BLASTX nr result

ID: Coptis24_contig00015183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015183
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532105.1| Protein sco1, putative [Ricinus communis] gi...   139   3e-31
gb|ABK24183.1| unknown [Picea sitchensis]                             135   3e-30
ref|XP_004148614.1| PREDICTED: protein SCO1 homolog 1, mitochond...   134   6e-30
ref|XP_003529165.1| PREDICTED: protein SCO1 homolog 1, mitochond...   132   3e-29
ref|XP_002263427.1| PREDICTED: protein SCO1 homolog 1, mitochond...   130   1e-28

>ref|XP_002532105.1| Protein sco1, putative [Ricinus communis]
           gi|223528208|gb|EEF30267.1| Protein sco1, putative
           [Ricinus communis]
          Length = 292

 Score =  139 bits (349), Expect = 3e-31
 Identities = 60/78 (76%), Positives = 72/78 (92%)
 Frame = -1

Query: 235 EINNASTTVKQGPSVGKAAIGGPFSLVNHEGKHVTDKDFRGKWTVIYFGFTHCPDICPDE 56
           +IN AS  VK+GPS GKAAIGGPF+L+NH+GK+VT+KDF GKWT++YFGFTHCPDICPDE
Sbjct: 110 KINKASEAVKEGPSAGKAAIGGPFNLINHDGKNVTEKDFMGKWTILYFGFTHCPDICPDE 169

Query: 55  LQKLVDAVNKIKEKAGIE 2
           LQKLV A++KIKEKAG+E
Sbjct: 170 LQKLVAAIDKIKEKAGLE 187


>gb|ABK24183.1| unknown [Picea sitchensis]
          Length = 331

 Score =  135 bits (341), Expect = 3e-30
 Identities = 61/78 (78%), Positives = 69/78 (88%)
 Frame = -1

Query: 235 EINNASTTVKQGPSVGKAAIGGPFSLVNHEGKHVTDKDFRGKWTVIYFGFTHCPDICPDE 56
           EI N    VK+GPSVGKAAIGGPF+LVNHEGK VTD+DF GKW++IYFGFTHCPDICPDE
Sbjct: 151 EIKNLPAQVKEGPSVGKAAIGGPFNLVNHEGKPVTDRDFTGKWSLIYFGFTHCPDICPDE 210

Query: 55  LQKLVDAVNKIKEKAGIE 2
           LQK+V A++KIKEKAG E
Sbjct: 211 LQKMVAAIDKIKEKAGFE 228


>ref|XP_004148614.1| PREDICTED: protein SCO1 homolog 1, mitochondrial-like [Cucumis
           sativus]
          Length = 324

 Score =  134 bits (338), Expect = 6e-30
 Identities = 64/78 (82%), Positives = 70/78 (89%)
 Frame = -1

Query: 235 EINNASTTVKQGPSVGKAAIGGPFSLVNHEGKHVTDKDFRGKWTVIYFGFTHCPDICPDE 56
           EIN AST VKQGPSVGKAAIGGPF LVNH+GK VT+KDF GKWT++YFGFTHCPDICPDE
Sbjct: 144 EINKASTEVKQGPSVGKAAIGGPFKLVNHDGKQVTEKDFFGKWTLLYFGFTHCPDICPDE 203

Query: 55  LQKLVDAVNKIKEKAGIE 2
           LQKL  AV+KIK KAGI+
Sbjct: 204 LQKLAAAVDKIK-KAGIK 220


>ref|XP_003529165.1| PREDICTED: protein SCO1 homolog 1, mitochondrial-like [Glycine max]
          Length = 332

 Score =  132 bits (332), Expect = 3e-29
 Identities = 59/77 (76%), Positives = 66/77 (85%)
 Frame = -1

Query: 232 INNASTTVKQGPSVGKAAIGGPFSLVNHEGKHVTDKDFRGKWTVIYFGFTHCPDICPDEL 53
           I   +  VKQGPS GKAAIGGPF L+NH GKHVT+KDF GKWT++YFGFTHCPDICP+EL
Sbjct: 153 IRTNTEAVKQGPSAGKAAIGGPFCLINHHGKHVTEKDFMGKWTLLYFGFTHCPDICPEEL 212

Query: 52  QKLVDAVNKIKEKAGIE 2
           QKL  AV+KIKEKAGIE
Sbjct: 213 QKLAAAVDKIKEKAGIE 229


>ref|XP_002263427.1| PREDICTED: protein SCO1 homolog 1, mitochondrial [Vitis vinifera]
           gi|296083175|emb|CBI22811.3| unnamed protein product
           [Vitis vinifera]
          Length = 302

 Score =  130 bits (327), Expect = 1e-28
 Identities = 58/78 (74%), Positives = 69/78 (88%)
 Frame = -1

Query: 235 EINNASTTVKQGPSVGKAAIGGPFSLVNHEGKHVTDKDFRGKWTVIYFGFTHCPDICPDE 56
           EIN +ST VK+GPS GKAAIGGPF+L+N EGK+VT+KDF GKWT+IYFGFTHCPDICPDE
Sbjct: 122 EINASSTAVKEGPSAGKAAIGGPFNLINDEGKNVTEKDFFGKWTLIYFGFTHCPDICPDE 181

Query: 55  LQKLVDAVNKIKEKAGIE 2
           L K+ DAV+KIK K G++
Sbjct: 182 LIKVADAVDKIKAKIGVD 199


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