BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015149
         (2740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP...   732   0.0  
ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putativ...   695   0.0  
ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP...   688   0.0  
ref|XP_003559979.1| PREDICTED: putative ATP-dependent helicase H...   638   0.0  
ref|NP_196428.2| UBQ, helicase-c and DEAD-like helicase domain-c...   643   0.0  

>ref|XP_002273025.2| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
            HRQ1-like [Vitis vinifera]
          Length = 1231

 Score =  732 bits (1890), Expect(3) = 0.0
 Identities = 357/525 (68%), Positives = 424/525 (80%), Gaps = 5/525 (0%)
 Frame = -3

Query: 1898 PVSEISSIFAEMVQHGLRCIAFCKTRKLCELVLFYTREILQETAPCLVDSICSYRGGYVA 1719
            P+ EIS +FAEM+QHGLRCIAFCK+RKLCELVL YTREILQETAP LVDSIC+YR GYVA
Sbjct: 714  PIWEISCLFAEMIQHGLRCIAFCKSRKLCELVLSYTREILQETAPHLVDSICAYRAGYVA 773

Query: 1718 QDRRRIESEFFGGKLRGVAATNALELGIDVGYIDATLHLGFPGSISSLWQQAGRSGRRER 1539
            QDRRRIES+FF GKL G+AATNALELGIDVG+ID TLHLGFPGSI+SLWQQAGRSGRRER
Sbjct: 774  QDRRRIESDFFSGKLCGIAATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRSGRRER 833

Query: 1538 PSLAVYVAFEGPLDQYFMTFPEKLFRRSIECCHVDAKNKQVLEQHLVCAAVEHPLSFLHD 1359
            PSLA+YVAFEGPLDQYFM FP+KLFRR IECCHVDA+N+QVLEQHLVCAA+EHPLS L+D
Sbjct: 834  PSLAIYVAFEGPLDQYFMKFPQKLFRRPIECCHVDAQNQQVLEQHLVCAALEHPLSLLYD 893

Query: 1358 DKYFGPSLHCSITALTKKGYLSSDPSRDSPVRIWSYIGHEKRPSYGISIRAIETEKYKVI 1179
            +KYFG  L+ +IT+LT +GYLS DPSR S  RIW+YIGH K PS+ +SIRAIETEKYKVI
Sbjct: 894  EKYFGSGLNSAITSLTNRGYLSFDPSRGSSSRIWNYIGHAKIPSHAVSIRAIETEKYKVI 953

Query: 1178 DKKTDEVIEEIEESKAFFQVYEGAVYMQQGKIYLVKDLDIFEKIALCEEDNPKYFTKTRD 999
            DK  DE++EEIEESKAFFQVY+GAVYM QGK YLVK+LDI  K+ALC++ + KY+TKTRD
Sbjct: 954  DKGRDELLEEIEESKAFFQVYDGAVYMHQGKTYLVKELDISRKLALCQQADLKYYTKTRD 1013

Query: 998  YTDVHVPGGDIAYTATQD-----STAAQTNFCKVTTTWFGFFKIQRGSNEILDSVPLSLP 834
            YTD+HV GG+IAY A         T AQ + C+VTTTWFGF +I +GSN++ D+V LSLP
Sbjct: 1014 YTDIHVIGGEIAYQARISRIQFARTTAQVHDCRVTTTWFGFRRIWKGSNKVFDTVELSLP 1073

Query: 833  NYSYESQAVWIRVPPSIKDAVENRKLSFPAGLHAVAHALCNVVPLFIQCNSSDLASECVN 654
             YSY+SQAVW+RVP S+K AVE  + SF AGLHA +HA+ NVVPL++ CNSSDLA EC N
Sbjct: 1074 TYSYQSQAVWVRVPQSVKTAVEIHRFSFRAGLHAASHAVLNVVPLYVICNSSDLAPECSN 1133

Query: 653  PNEIHYLSEGEIKYRRQKVPERILLYDQHPGGSGVSAQLQPRFREILVASLELITTCRCS 474
            P++  Y            +PERILLYD HPGG+G SAQ++  F E+L A+LEL+ +C C+
Sbjct: 1134 PHDTRY------------IPERILLYDPHPGGTGFSAQVRSHFTELLTAALELLMSCCCT 1181

Query: 473  VETGCPSCVQSFSCHEYNEVLHKNXXXXXXXXXXXXX*SYSGRGH 339
             +TGCP+C+Q+ +C EYNE+LHK+              SY G GH
Sbjct: 1182 GDTGCPNCIQNLACGEYNELLHKDAAIMIIKGVLEAEESYFG-GH 1225



 Score =  253 bits (647), Expect(3) = 0.0
 Identities = 125/162 (77%), Positives = 141/162 (87%)
 Frame = -3

Query: 2735 RCHDMKPLLPAEMVEHLRKGIGSREQIVHIEEICGRKAVYVDIPNALSETTRSALKRIGV 2556
            +CHD  PLLP EMVEHLRKG+G + Q+VH+EEIC R A+ V+IP+ LSE T+SAL+ IGV
Sbjct: 424  KCHDTNPLLPMEMVEHLRKGMGCQGQMVHVEEICARMAIRVEIPDELSENTKSALEHIGV 483

Query: 2555 SRLYSHQAESIQASLSGKNVVVATMTSSGKSLCYNVPVLESLSQNLTSCALYLFPTKALA 2376
            +RLYSHQAESIQASL GKNVVVATMTSSGKSLCYNVPVLE LSQNL SCALYLFPTKALA
Sbjct: 484  TRLYSHQAESIQASLGGKNVVVATMTSSGKSLCYNVPVLEVLSQNLLSCALYLFPTKALA 543

Query: 2375 QDQMRALSLMTEGMKMSCAMGVYDGDTSQGDRMWLRDNARLV 2250
            QDQ+RAL  MT+G  +S  MGVYDGDTS+ DRMWLRDNARL+
Sbjct: 544  QDQLRALLAMTKGSDVSLKMGVYDGDTSEEDRMWLRDNARLL 585



 Score =  190 bits (482), Expect(3) = 0.0
 Identities = 91/115 (79%), Positives = 95/115 (82%)
 Frame = -2

Query: 2244 LITNPDMLHMSILPSHTQFQRILSNLRFVVIDETHTYKGAFGCHTAXXXXXXXXLCAHVY 2065
            LITNPDMLHMSILP H QF+RILSNLRFV+IDE H YKGAFGCHTA        LC HVY
Sbjct: 585  LITNPDMLHMSILPFHGQFRRILSNLRFVIIDEAHAYKGAFGCHTAFILRRLRRLCHHVY 644

Query: 2064 GSDPSFIFCTATSANPREHAMELAGLPTLDLIQNDGSPSGPKLFVLWNPPLIWKT 1900
            GSDPSFIFCTATSANPR+HAMELA LPTL+LI NDGSPSGPK F LWNP L  KT
Sbjct: 645  GSDPSFIFCTATSANPRDHAMELANLPTLELIHNDGSPSGPKFFALWNPALCSKT 699


>ref|XP_002514608.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223546212|gb|EEF47714.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 1189

 Score =  695 bits (1793), Expect(3) = 0.0
 Identities = 342/508 (67%), Positives = 402/508 (79%), Gaps = 5/508 (0%)
 Frame = -3

Query: 1910 FGRRPVSEISSIFAEMVQHGLRCIAFCKTRKLCELVLFYTREILQETAPCLVDSICSYRG 1731
            F   P+SE+S +FAEM+QHGLRCIAFCK+RKL ELVL YTREILQ+TAP LV+ IC+YRG
Sbjct: 663  FFDNPISEVSYLFAEMIQHGLRCIAFCKSRKLTELVLSYTREILQKTAPHLVNLICAYRG 722

Query: 1730 GYVAQDRRRIESEFFGGKLRGVAATNALELGIDVGYIDATLHLGFPGSISSLWQQAGRSG 1551
            GY  ++RR+IE EFF G L G+AATNALELGIDVG+IDATLHLGFPGSISSLWQQAGRSG
Sbjct: 723  GYAPEERRKIEREFFSGTLCGIAATNALELGIDVGHIDATLHLGFPGSISSLWQQAGRSG 782

Query: 1550 RRERPSLAVYVAFEGPLDQYFMTFPEKLFRRSIECCHVDAKNKQVLEQHLVCAAVEHPLS 1371
            RRE+PSLAVYVAFEGPLDQYFM  P+KLF   IECCHVDA+N++VLEQHLVCAA+EHPL+
Sbjct: 783  RREKPSLAVYVAFEGPLDQYFMKHPKKLFNNPIECCHVDAQNEKVLEQHLVCAALEHPLN 842

Query: 1370 FLHDDKYFGPSLHCSITALTKKGYLSSDPSRDSPVRIWSYIGHEKRPSYGISIRAIETEK 1191
              HD+KYFG  L  S+ +L  KGYLS DPS  S  RIWSYIGHEK PS+GI IRAIE  +
Sbjct: 843  LPHDEKYFGSGLSKSLMSLKSKGYLSYDPSCGSSARIWSYIGHEKSPSHGICIRAIEAVR 902

Query: 1190 YKVIDKKTDEVIEEIEESKAFFQVYEGAVYMQQGKIYLVKDLDIFEKIALCEEDNPKYFT 1011
            Y+VID K +EV+EEIEESKAFFQVYEGAVYM QGK YLV++L I EKIALC   + +Y+T
Sbjct: 903  YRVIDVKQNEVLEEIEESKAFFQVYEGAVYMHQGKTYLVEELIISEKIALCRRADLQYYT 962

Query: 1010 KTRDYTDVHVPGGDIAYTATQD-----STAAQTNFCKVTTTWFGFFKIQRGSNEILDSVP 846
            KTRDYTD+HV GG IAY+A         T AQ N+CKVTT WFGF++I+RG+  ILD   
Sbjct: 963  KTRDYTDIHVLGGGIAYSARVSKNQSLKTTAQANYCKVTTIWFGFYRIERGTKRILDKCD 1022

Query: 845  LSLPNYSYESQAVWIRVPPSIKDAVENRKLSFPAGLHAVAHALCNVVPLFIQCNSSDLAS 666
            LSLP YSYESQAVWI+VP S+K +V+ +   F  GLHA +HA+  VVPL++ CN SDLA 
Sbjct: 1023 LSLPKYSYESQAVWIQVPQSVKISVQ-KYFPFRKGLHAASHAILKVVPLYVFCNYSDLAP 1081

Query: 665  ECVNPNEIHYLSEGEIKYRRQKVPERILLYDQHPGGSGVSAQLQPRFREILVASLELITT 486
            EC NP++  +             PERIL+YDQHPGG+GVS Q+QP F E+L A+LEL+T+
Sbjct: 1082 ECPNPHDTRFF------------PERILVYDQHPGGTGVSVQIQPYFTELLNAALELLTS 1129

Query: 485  CRCSVETGCPSCVQSFSCHEYNEVLHKN 402
            C CS  TGCP CVQS +CHEYNEVLHKN
Sbjct: 1130 CHCSGITGCPHCVQSMACHEYNEVLHKN 1157



 Score =  219 bits (559), Expect(3) = 0.0
 Identities = 106/161 (65%), Positives = 133/161 (82%)
 Frame = -3

Query: 2732 CHDMKPLLPAEMVEHLRKGIGSREQIVHIEEICGRKAVYVDIPNALSETTRSALKRIGVS 2553
            CH+   L+P EMV+HLR+G+GS   +VH+E+I  RKA+Y +IP+ LS+ T+ ALK +G++
Sbjct: 386  CHETNHLVPVEMVQHLREGLGSNGHMVHVEDIDARKAIYAEIPHELSDNTKLALKCMGIT 445

Query: 2552 RLYSHQAESIQASLSGKNVVVATMTSSGKSLCYNVPVLESLSQNLTSCALYLFPTKALAQ 2373
            +LYSHQA+SI ASL+ KNVVV+TMTSSGKSLCYNVPVLE LSQNL+SCALYLFPTKALAQ
Sbjct: 446  KLYSHQAKSIMASLARKNVVVSTMTSSGKSLCYNVPVLEVLSQNLSSCALYLFPTKALAQ 505

Query: 2372 DQMRALSLMTEGMKMSCAMGVYDGDTSQGDRMWLRDNARLV 2250
            DQ+RAL  M +    S  +G+YDGDTSQ +R WLRDNARL+
Sbjct: 506  DQLRALLAMAKEFDTSINIGIYDGDTSQTERPWLRDNARLL 546



 Score =  172 bits (435), Expect(3) = 0.0
 Identities = 87/120 (72%), Positives = 90/120 (75%)
 Frame = -2

Query: 2244 LITNPDMLHMSILPSHTQFQRILSNLRFVVIDETHTYKGAFGCHTAXXXXXXXXLCAHVY 2065
            LITNPDMLHMSILP H QF RILSNLRFVVIDE H YKGAFGCHTA        +C+HVY
Sbjct: 546  LITNPDMLHMSILPFHRQFSRILSNLRFVVIDEAHYYKGAFGCHTALILRRLRRICSHVY 605

Query: 2064 GSDPSFIFCTATSANPREHAMELAGLPTLDLIQNDGSPSGPKLFVLWNPPLIWKTPSFGD 1885
            GSDPSFIF TATSANP EH MELA L TLDLI  DGSPS  KLF LWNP +     SF D
Sbjct: 606  GSDPSFIFSTATSANPHEHCMELANLSTLDLINIDGSPSTKKLFALWNPIVCALLLSFFD 665


>ref|XP_004138330.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent helicase
            HRQ1-like [Cucumis sativus]
          Length = 1218

 Score =  688 bits (1775), Expect(3) = 0.0
 Identities = 332/508 (65%), Positives = 401/508 (78%), Gaps = 5/508 (0%)
 Frame = -3

Query: 1910 FGRRPVSEISSIFAEMVQHGLRCIAFCKTRKLCELVLFYTREILQETAPCLVDSICSYRG 1731
            F   P+ +I+ +FAEMVQHGLRCIAFCKTRKLCELVL YTREIL+E+AP LV S+C+YR 
Sbjct: 705  FTMNPIMDIARLFAEMVQHGLRCIAFCKTRKLCELVLCYTREILKESAPHLVQSVCAYRA 764

Query: 1730 GYVAQDRRRIESEFFGGKLRGVAATNALELGIDVGYIDATLHLGFPGSISSLWQQAGRSG 1551
            GY A+DRRRIES+FFGG L GVAATNALELGIDVG+IDATLHLGFPGSI+SLWQQAGR+G
Sbjct: 765  GYTAEDRRRIESDFFGGNLCGVAATNALELGIDVGHIDATLHLGFPGSIASLWQQAGRAG 824

Query: 1550 RRERPSLAVYVAFEGPLDQYFMTFPEKLFRRSIECCHVDAKNKQVLEQHLVCAAVEHPLS 1371
            RRE+ SL+VYVAFEGPLDQYFM  PEKLF   IECCH+DA+N+QVLEQHL+CAA EHP+ 
Sbjct: 825  RREKTSLSVYVAFEGPLDQYFMKHPEKLFGSPIECCHIDAENQQVLEQHLLCAAYEHPVC 884

Query: 1370 FLHDDKYFGPSLHCSITALTKKGYLSSDPSRDSPVRIWSYIGHEKRPSYGISIRAIETEK 1191
              +D K+FGP L+ ++ +L  +G L  +PS  S   IW+YIG +K PS  +SIRAIE E+
Sbjct: 885  LAYDQKFFGPGLNNALMSLKNRGDLIPEPSCGSSKSIWNYIGQKKMPSCSVSIRAIEAER 944

Query: 1190 YKVIDKKTDEVIEEIEESKAFFQVYEGAVYMQQGKIYLVKDLDIFEKIALCEEDNPKYFT 1011
            YKV+D++ +EV+EEIEESKAFFQVYEGAVYM QG+ YLVK L++   +A CEE + KY+T
Sbjct: 945  YKVVDQRRNEVLEEIEESKAFFQVYEGAVYMHQGRTYLVKSLNLSTMLAFCEEADLKYYT 1004

Query: 1010 KTRDYTDVHVPGGDIAY-----TATQDSTAAQTNFCKVTTTWFGFFKIQRGSNEILDSVP 846
            KTRDYTD+HV GG++AY           T AQ N C+VTTTWFGF++IQ+GSN+ILDSV 
Sbjct: 1005 KTRDYTDIHVIGGNLAYPRRAPNIPPSKTTAQANDCRVTTTWFGFYRIQKGSNQILDSVD 1064

Query: 845  LSLPNYSYESQAVWIRVPPSIKDAVENRKLSFPAGLHAVAHALCNVVPLFIQCNSSDLAS 666
            LSLP YSY SQAVWI VP S+K+ V+ +  +F AGLH  +HAL NVVPL I CN SDLA 
Sbjct: 1065 LSLPKYSYNSQAVWIPVPQSVKEEVKRKNFNFRAGLHGASHALLNVVPLRIICNMSDLAP 1124

Query: 665  ECVNPNEIHYLSEGEIKYRRQKVPERILLYDQHPGGSGVSAQLQPRFREILVASLELITT 486
            EC NP++  Y             PERILLYDQHPGG+G+S Q+QP F E+L A+ EL+T+
Sbjct: 1125 ECANPHDTRYF------------PERILLYDQHPGGTGMSLQIQPVFIELLNAAFELLTS 1172

Query: 485  CRCSVETGCPSCVQSFSCHEYNEVLHKN 402
            CRC  ETGCP+CVQS +CHEYNEVLHK+
Sbjct: 1173 CRCYGETGCPNCVQSLACHEYNEVLHKD 1200



 Score =  216 bits (549), Expect(3) = 0.0
 Identities = 108/162 (66%), Positives = 131/162 (80%)
 Frame = -3

Query: 2735 RCHDMKPLLPAEMVEHLRKGIGSREQIVHIEEICGRKAVYVDIPNALSETTRSALKRIGV 2556
            RCHD   LLP +MVEHL K +G   QIVHI +I  RKA YV+IP  LS +  SALK IGV
Sbjct: 423  RCHDTLKLLPEDMVEHLGKSVGPEGQIVHINDILARKANYVEIPKELSNSVVSALKCIGV 482

Query: 2555 SRLYSHQAESIQASLSGKNVVVATMTSSGKSLCYNVPVLESLSQNLTSCALYLFPTKALA 2376
            ++LYSHQA SI+ASL+GK+V VATMTSSGKSLCYN+PVLE++SQN++SCALYLFPTKALA
Sbjct: 483  AKLYSHQARSIEASLAGKHVAVATMTSSGKSLCYNLPVLEAMSQNVSSCALYLFPTKALA 542

Query: 2375 QDQMRALSLMTEGMKMSCAMGVYDGDTSQGDRMWLRDNARLV 2250
            QDQ+R+L +M +G   +  +GVYDGDTS  DR+ LRDNARL+
Sbjct: 543  QDQLRSLLVMMKGFNHNLNIGVYDGDTSLADRILLRDNARLL 584



 Score =  178 bits (452), Expect(3) = 0.0
 Identities = 84/112 (75%), Positives = 92/112 (82%)
 Frame = -2

Query: 2244 LITNPDMLHMSILPSHTQFQRILSNLRFVVIDETHTYKGAFGCHTAXXXXXXXXLCAHVY 2065
            LITNPDMLH+SILP H QF RILSNLRF+VIDE HTYKGAFGCHTA        LC+HVY
Sbjct: 584  LITNPDMLHVSILPHHRQFGRILSNLRFIVIDEAHTYKGAFGCHTALILRRLRRLCSHVY 643

Query: 2064 GSDPSFIFCTATSANPREHAMELAGLPTLDLIQNDGSPSGPKLFVLWNPPLI 1909
            GSDPSFIFCTATSANPREH MEL  L +L+LI NDGSPS  KLF+LWNP ++
Sbjct: 644  GSDPSFIFCTATSANPREHCMELGNLSSLELIDNDGSPSARKLFLLWNPVMV 695


>ref|XP_003559979.1| PREDICTED: putative ATP-dependent helicase HRQ1-like [Brachypodium
            distachyon]
          Length = 1015

 Score =  638 bits (1645), Expect(3) = 0.0
 Identities = 311/504 (61%), Positives = 386/504 (76%), Gaps = 6/504 (1%)
 Frame = -3

Query: 1898 PVSEISSIFAEMVQHGLRCIAFCKTRKLCELVLFYTREILQETAPCLVDSICSYRGGYVA 1719
            P+ E+S +F+EMVQHGLRCIAFCKTRKLCELVL YTREILQETA  LVDSIC YR GY+A
Sbjct: 497  PIVEVSYLFSEMVQHGLRCIAFCKTRKLCELVLSYTREILQETAKELVDSICVYRAGYIA 556

Query: 1718 QDRRRIESEFFGGKLRGVAATNALELGIDVGYIDATLHLGFPGSISSLWQQAGRSGRRER 1539
            +DRR+IE++ F GKLRGVAATNALELGIDVG+IDATLHLGFPGS++SLWQQAGRSGRR +
Sbjct: 557  EDRRKIETDLFEGKLRGVAATNALELGIDVGHIDATLHLGFPGSVASLWQQAGRSGRRAK 616

Query: 1538 PSLAVYVAFEGPLDQYFMTFPEKLFRRSIECCHVDAKNKQVLEQHLVCAAVEHPLSFLHD 1359
             SLA+YVAFEGPLDQYFM FP KLF + IE C VD+ N +VLEQHL CAA EHP+   +D
Sbjct: 617  QSLAIYVAFEGPLDQYFMKFPHKLFGKPIEHCQVDSHNPKVLEQHLACAAFEHPICLQYD 676

Query: 1358 DKYFGPSLHCSITALTKKGYLSSDPSRDSPVRIWSYIGHEKRPSYGISIRAIETEKYKVI 1179
            + +FG +LH  +T L +KGYL ++PS      +W+Y+G EKRPS  +SIRAIE +KY VI
Sbjct: 677  ENHFGSNLHSVMTTLKEKGYLINNPSGPFSSTMWNYVGPEKRPSQMVSIRAIEHDKYSVI 736

Query: 1178 DKKTDEVIEEIEESKAFFQVYEGAVYMQQGKIYLVKDLDIFEKIALCEEDNPKYFTKTRD 999
            D+  + ++EEIEESKAFFQVYEGAVYM QG  YLV++LD+  + A C + + KY+TKTRD
Sbjct: 737  DRLNNRLLEEIEESKAFFQVYEGAVYMNQGANYLVEELDLPSRTAFCRKADLKYYTKTRD 796

Query: 998  YTDVHVPGGDIAYTATQD------STAAQTNFCKVTTTWFGFFKIQRGSNEILDSVPLSL 837
            YTD++V  GD AY  T         T AQ N CKVTT WFGF++I + SN+I DS+ LSL
Sbjct: 797  YTDINVLRGDFAYLPTGICKTSCLKTTAQANDCKVTTKWFGFYRICKSSNKISDSIELSL 856

Query: 836  PNYSYESQAVWIRVPPSIKDAVENRKLSFPAGLHAVAHALCNVVPLFIQCNSSDLASECV 657
            P YSY S+AVWIR+P S K  VE RKL F  G HA +HAL N+VPL + C++SDL +ECV
Sbjct: 857  PPYSYNSEAVWIRIPHSAKITVEERKLDFRGGSHAASHALLNIVPLHMMCSASDLGTECV 916

Query: 656  NPNEIHYLSEGEIKYRRQKVPERILLYDQHPGGSGVSAQLQPRFREILVASLELITTCRC 477
            NP+E             + +PERILLYD+HPGG G+++Q++  F E+L+A+L+L++TC C
Sbjct: 917  NPHE------------TRGMPERILLYDKHPGGIGIASQVKMLFGELLLAALDLVSTCSC 964

Query: 476  SVETGCPSCVQSFSCHEYNEVLHK 405
            S   GCP+C+QS +C EYNEVL K
Sbjct: 965  SSSAGCPNCIQSLTCSEYNEVLDK 988



 Score =  207 bits (526), Expect(3) = 0.0
 Identities = 101/161 (62%), Positives = 125/161 (77%)
 Frame = -3

Query: 2732 CHDMKPLLPAEMVEHLRKGIGSREQIVHIEEICGRKAVYVDIPNALSETTRSALKRIGVS 2553
            CHD  PL PA MV+HL KG+G   QIVHIEEI  R A Y ++P+ LSE  R AL+ IG+S
Sbjct: 208  CHDKHPLGPAGMVQHLEKGLGKEGQIVHIEEIPCRGASYAELPSHLSEAMREALESIGIS 267

Query: 2552 RLYSHQAESIQASLSGKNVVVATMTSSGKSLCYNVPVLESLSQNLTSCALYLFPTKALAQ 2373
            RLYSHQ+E+IQ+S+SGK+VVVAT T+SGKSLCYN+PVLESLSQ+  +CALY+FPTKALAQ
Sbjct: 268  RLYSHQSEAIQSSISGKHVVVATSTASGKSLCYNIPVLESLSQDSMACALYIFPTKALAQ 327

Query: 2372 DQMRALSLMTEGMKMSCAMGVYDGDTSQGDRMWLRDNARLV 2250
            DQ+R+L  M           +YDGDT + DR+W+RDNARL+
Sbjct: 328  DQLRSLVEMKNAFHTDIDAKIYDGDTPRADRLWIRDNARLL 368



 Score =  173 bits (439), Expect(3) = 0.0
 Identities = 81/120 (67%), Positives = 95/120 (79%)
 Frame = -2

Query: 2244 LITNPDMLHMSILPSHTQFQRILSNLRFVVIDETHTYKGAFGCHTAXXXXXXXXLCAHVY 2065
            LITNPDMLH+S+LP H QFQRILSNLR++VIDE H+YKGAFGCHTA        +C++VY
Sbjct: 368  LITNPDMLHVSVLPCHAQFQRILSNLRYIVIDEAHSYKGAFGCHTALILRRLKRICSNVY 427

Query: 2064 GSDPSFIFCTATSANPREHAMELAGLPTLDLIQNDGSPSGPKLFVLWNPPLIWKTPSFGD 1885
            GS P+F+FCTATSA+PREH MELA L   +LIQNDGSP G K F+LWNPPL  + P  GD
Sbjct: 428  GSHPTFLFCTATSASPREHVMELAKLDNAELIQNDGSPCGSKFFLLWNPPL--RMPKEGD 485


>ref|NP_196428.2| UBQ, helicase-c and DEAD-like helicase domain-containing protein
            [Arabidopsis thaliana] gi|332003865|gb|AED91248.1| UBQ,
            helicase-c and DEAD-like helicase domain-containing
            protein [Arabidopsis thaliana]
          Length = 1141

 Score =  643 bits (1659), Expect(3) = 0.0
 Identities = 313/500 (62%), Positives = 384/500 (76%), Gaps = 2/500 (0%)
 Frame = -3

Query: 1898 PVSEISSIFAEMVQHGLRCIAFCKTRKLCELVLFYTREILQETAPCLVDSICSYRGGYVA 1719
            P SE+S +FAEMVQHGLRCIAFC +RKLCELVL  TREIL ETAP LV++I SYRGGY+A
Sbjct: 638  PASEVSHLFAEMVQHGLRCIAFCPSRKLCELVLCLTREILAETAPHLVEAITSYRGGYIA 697

Query: 1718 QDRRRIESEFFGGKLRGVAATNALELGIDVGYIDATLHLGFPGSISSLWQQAGRSGRRER 1539
            +DRR+IES+ FGGKL G+AATNALELGIDVG+ID TLHLGFPGSI+SLWQQAGRSGRR++
Sbjct: 698  EDRRKIESDLFGGKLCGIAATNALELGIDVGHIDVTLHLGFPGSIASLWQQAGRSGRRQK 757

Query: 1538 PSLAVYVAFEGPLDQYFMTFPEKLFRRSIECCHVDAKNKQVLEQHLVCAAVEHPLSFLHD 1359
            PSLAVYVAF GPLDQY+M+FP+KLF   IECCH+D++NK VL QHL CAA+EHPLS  +D
Sbjct: 758  PSLAVYVAFLGPLDQYYMSFPDKLFGSPIECCHIDSQNKHVLMQHLACAALEHPLSLQYD 817

Query: 1358 DKYFGPSLHCSITALTKKGYLSSDPSRDSPVRIWSYIGHEKRPSYGISIRAIETEKYKVI 1179
             ++FG  L   +  L  KG+LS DPSRDS  RIW+YIG EK P+  +SIRAIET +Y+V+
Sbjct: 818  QQHFGSGLSDPLAELRNKGFLSFDPSRDSSSRIWNYIGREKNPARIVSIRAIETVRYRVM 877

Query: 1178 DKKTDEVIEEIEESKAFFQVYEGAVYMQQGKIYLVKDLDIFEKIALCEEDNPKYFTKTRD 999
            +KK+ +V++EIEESKAFF VYEGA+YM QG+ YLV  LDI EK+ALCE  N  Y+T+TRD
Sbjct: 878  EKKSKDVLDEIEESKAFFHVYEGAIYMNQGRNYLVTSLDIKEKVALCELVNVDYYTRTRD 937

Query: 998  YTDVHVPGGDIAY-TATQDSTAAQTNFCKVTTTWFGFFKIQRGSNEILDSVPLSLPNYSY 822
            YTD+ V GGD AY          QT+ C+VTT WFGF +I+R +NE++D V LSLP+Y+Y
Sbjct: 938  YTDIKVTGGDTAYPVKAPKKPTPQTHACRVTTKWFGFLRIRRRNNEVIDDVELSLPSYTY 997

Query: 821  ESQAVWIRVPPSIKDAVENRKLSFPAGLHAVAHALCNVVPLFIQCNSSDLASECVNPNEI 642
            +SQAVWI+VP S+K AVE   L F AGLHA  HAL NVVP  + CN SD+A EC NP E 
Sbjct: 998  QSQAVWIQVPMSVKLAVETANLPFRAGLHAACHALVNVVPTRVTCNYSDIAPECPNPQEQ 1057

Query: 641  HYLSEGEIKYRRQKVPERILLYDQHPGGSGVSAQLQPRFREILVASLELITTC-RCSVET 465
             Y             P RIL+YD+HPGG+G+SA++ P F E+L  + +L+ +C +C  ET
Sbjct: 1058 RYF------------PARILVYDRHPGGTGISAKICPLFFELLKDARDLLRSCEKCPPET 1105

Query: 464  GCPSCVQSFSCHEYNEVLHK 405
            GCP C Q+F C  YNE+LHK
Sbjct: 1106 GCPKCAQTFGCRGYNELLHK 1125



 Score =  215 bits (547), Expect(3) = 0.0
 Identities = 108/161 (67%), Positives = 129/161 (80%)
 Frame = -3

Query: 2732 CHDMKPLLPAEMVEHLRKGIGSREQIVHIEEICGRKAVYVDIPNALSETTRSALKRIGVS 2553
            CH    LLP+EMVEHLR GIGS+ Q+VH+E I  RK+ YV++ + LSETT+SALKRIG++
Sbjct: 333  CHATNSLLPSEMVEHLRNGIGSKGQVVHVEVIKARKSAYVEMSDKLSETTKSALKRIGLN 392

Query: 2552 RLYSHQAESIQASLSGKNVVVATMTSSGKSLCYNVPVLESLSQNLTSCALYLFPTKALAQ 2373
             LYSHQAE+I A+L+GKNV VATMTSSGKSLCYNVPV E L ++  SCALYLFPTKALAQ
Sbjct: 393  TLYSHQAEAISAALAGKNVAVATMTSSGKSLCYNVPVFEELCKDTNSCALYLFPTKALAQ 452

Query: 2372 DQMRALSLMTEGMKMSCAMGVYDGDTSQGDRMWLRDNARLV 2250
            DQ+RALS + +G + S  MGVYDGDT   DR  LR NARL+
Sbjct: 453  DQLRALSDLIKGFEASINMGVYDGDTPYKDRTRLRSNARLL 493



 Score =  156 bits (394), Expect(3) = 0.0
 Identities = 77/110 (70%), Positives = 84/110 (76%), Gaps = 1/110 (0%)
 Frame = -2

Query: 2244 LITNPDMLHMSILPSHT-QFQRILSNLRFVVIDETHTYKGAFGCHTAXXXXXXXXLCAHV 2068
            LITNPDMLH+SIL  H  QF RILSNLR++VIDE H YKG FGCH A        LC+HV
Sbjct: 493  LITNPDMLHISILRRHKEQFSRILSNLRYIVIDEAHIYKGPFGCHMALILRRLRRLCSHV 552

Query: 2067 YGSDPSFIFCTATSANPREHAMELAGLPTLDLIQNDGSPSGPKLFVLWNP 1918
            YG +PSFIFCTATSANPREH MELA L  L+L+  DGSPS  KLFVLWNP
Sbjct: 553  YGVNPSFIFCTATSANPREHCMELANLSELELVTIDGSPSSEKLFVLWNP 602