BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015146
         (577 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524459.1| conserved hypothetical protein [Ricinus comm...   188   6e-46
ref|XP_002281877.1| PREDICTED: zinc finger CCCH domain-containin...   187   8e-46
ref|XP_004139420.1| PREDICTED: zinc finger CCCH domain-containin...   184   7e-45
ref|XP_002313732.1| predicted protein [Populus trichocarpa] gi|2...   176   3e-42
ref|XP_003550830.1| PREDICTED: zinc finger CCCH domain-containin...   157   2e-36

>ref|XP_002524459.1| conserved hypothetical protein [Ricinus communis]
           gi|223536247|gb|EEF37899.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 341

 Score =  188 bits (477), Expect = 6e-46
 Identities = 94/212 (44%), Positives = 129/212 (60%), Gaps = 20/212 (9%)
 Frame = -1

Query: 577 VGFWPEIPINNN-------DRPVPPLKRPRNSEATPLVPVPNHNMNLRIPLPPNPLANRR 419
           +G WP+ P+N+N       D   PP KRPRNSE        N +MN R+P P N   N+ 
Sbjct: 24  IGIWPQFPMNSNEQFDPQFDHHQPPFKRPRNSEDN------NQSMNYRMPPPNNLPINKG 77

Query: 418 MNKLFFKTRLCEKFRQGTCPYGSSCHYAHGIEEMRKAPPNWQD---IVASNGDDRMV-NW 251
              +FFKTR+C KF+ G+C  G +C++AHG+++MR+ PPNWQ+   +V    +DR   NW
Sbjct: 78  TTNIFFKTRMCAKFKTGSCRNGENCNFAHGMQDMRQPPPNWQELVGVVVRGEEDRPAGNW 137

Query: 250 EEDQNIINRMRLCRKFYNGEECPFGDRCNYRHEDPRK-------FRETSVISIRTTGPPI 92
           ++DQ II++M+LC+KFYNGE+CP+GDRCN+ HEDP K       FRE+S ISI TT PP+
Sbjct: 138 DDDQRIIHKMKLCKKFYNGEQCPYGDRCNFLHEDPSKFRDDAGRFRESSAISIGTTAPPM 197

Query: 91  --DDGPKTEQSDRSETVNSSVDGNWMNLKPAY 2
               G  +         N+  D    N+KP Y
Sbjct: 198 MHGSGGLSVVEVNKPVNNAGADAYRGNMKPVY 229


>ref|XP_002281877.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           [Vitis vinifera]
          Length = 349

 Score =  187 bits (476), Expect = 8e-46
 Identities = 96/212 (45%), Positives = 132/212 (62%), Gaps = 20/212 (9%)
 Frame = -1

Query: 577 VGFWPEIPINNNDRPV------PPLKRPRNSEATPLVPVPNHNMNLRIPLPPNPLANRRM 416
           +G W + P+NN +  V      PP KR RNSE       P+ +MN RI  PPN   +R  
Sbjct: 24  IGSWSQFPMNNEEYEVHSHFEYPPHKRTRNSEGQMPNSSPHPSMNPRIH-PPNAPTSRGT 82

Query: 415 NKLFFKTRLCEKFRQGTCPYGSSCHYAHGIEEMRKAPPNWQDIVASNGDDRMVN---WEE 245
           + +FFKTR+C KF+ G C  G +C++AHG+E+MR+ PPNWQ++V   G +       W+E
Sbjct: 83  SNIFFKTRICAKFKLGQCRNGENCNFAHGMEDMRQPPPNWQELVNVGGREEERGTKIWDE 142

Query: 244 DQNIINRMRLCRKFYNGEECPFGDRCNYRHEDPRKFRETS-------VISIRTTGPPIDD 86
           DQ II++M+LC+KFYNGEECP+GDRCN+ HEDP+KFR+ S        ISI TTGPP++ 
Sbjct: 143 DQRIIHKMKLCKKFYNGEECPYGDRCNFLHEDPKKFRDDSARPRESFAISIGTTGPPMEH 202

Query: 85  GP----KTEQSDRSETVNSSVDGNWMNLKPAY 2
           G      +  S    ++NS +D    N+KP Y
Sbjct: 203 GSGSNLGSNLSSNLSSMNSGLDPFRGNVKPTY 234


>ref|XP_004139420.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           [Cucumis sativus] gi|449520655|ref|XP_004167349.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           39-like [Cucumis sativus]
          Length = 347

 Score =  184 bits (468), Expect = 7e-45
 Identities = 91/180 (50%), Positives = 117/180 (65%), Gaps = 16/180 (8%)
 Frame = -1

Query: 574 GFWPEIPINNNDRPV-------PPLKRPRNSEATPLVPVPNHNMNLRIP-LPPNPLANRR 419
           G W + P N+   P        PP KR RNSE  P  P+   N +L     PPN   N+ 
Sbjct: 26  GCWSQFPRNDPFDPQSQFEVQQPPYKRARNSEENPSSPISYSNPSLNSRGQPPNAPVNKG 85

Query: 418 MNKLFFKTRLCEKFRQGTCPYGSSCHYAHGIEEMRKAPPNWQDIVASNGDDRMV-NWEED 242
           ++ +FFKTR+C KF+ G C  G+SC++AHG+E+MR+ PPNWQ+IV    DD+ V NW +D
Sbjct: 86  ISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMRQPPPNWQEIVGIKEDDQSVNNWNDD 145

Query: 241 QNIINRMRLCRKFYNGEECPFGDRCNYRHEDPRK-------FRETSVISIRTTGPPIDDG 83
           Q II +M+LCRKFYNGEECP+GDRCN+ HEDP K       FRE+S ISI TTG P+ +G
Sbjct: 146 QKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDSGRFRESSAISIGTTGTPLMNG 205


>ref|XP_002313732.1| predicted protein [Populus trichocarpa] gi|222850140|gb|EEE87687.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  176 bits (446), Expect = 3e-42
 Identities = 92/210 (43%), Positives = 133/210 (63%), Gaps = 18/210 (8%)
 Frame = -1

Query: 577 VGFWPEIPINNNDR---PVPPLKRPRNSEATPLVPVPNHNMNLRIPLPPNPLANRRMNKL 407
           +G WP+  +NN ++     PP KRPRNSE  P     N ++N R P   N   ++    +
Sbjct: 24  IGVWPQFVMNNIEQFEHHQPPYKRPRNSEDNP-----NQSVNSRTPPTNNLPVHKGATNI 78

Query: 406 FFKTRLCEKFRQGTCPYGSSCHYAHGIEEMRKAPPNWQDIVA---SNGDDRMV--NWEED 242
           FFKTR+C KF+ GTC  G +C++AHG++++R+ PPNW+++V    S+ +DR    NWE+D
Sbjct: 79  FFKTRVCAKFKTGTCRNGENCNFAHGMQDLRQPPPNWKELVGVSVSSEEDRSTATNWEDD 138

Query: 241 QNIINRMRLCRKFYNGEECPFGDRCNYRHEDPRK-------FRETSVISIRTTGPPIDDG 83
           Q II++M+LC+KFYNGEECP+GDRCN+ HEDP K       FRE+S ISI TTG  +  G
Sbjct: 139 QRIIHKMKLCKKFYNGEECPYGDRCNFLHEDPSKFREDTGRFRESSAISIGTTGQALGHG 198

Query: 82  PKT-EQSDRSETVNSSV-DGNWMN-LKPAY 2
                 ++ +   N++V D +  N +KP Y
Sbjct: 199 SGVFNAAEVNRPANNAVSDASRSNIIKPVY 228


>ref|XP_003550830.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           [Glycine max]
          Length = 347

 Score =  157 bits (396), Expect = 2e-36
 Identities = 78/199 (39%), Positives = 121/199 (60%), Gaps = 14/199 (7%)
 Frame = -1

Query: 556 PINNNDRPVPPLKRPRNSEATPLVPVPNHNMNLRIPLPP----NPLANRRMNKLFFKTRL 389
           P +  DRP P  KR R  +         ++++  +  PP    +P  N+  + +FFKTR+
Sbjct: 39  PHSPQDRP-PSFKRARTCD---------NSLSNAMACPPRMIQHPAVNKGTSHIFFKTRI 88

Query: 388 CEKFRQGTCPYGSSCHYAHGIEEMRKAPPNWQDIVASNGDDR---MVNWEEDQNIINRMR 218
           C KFR G C  G +C++AHG+E+MR+ PPNWQ++V   G++R     +W++DQ II++M+
Sbjct: 89  CAKFRVGACRNGENCNFAHGLEDMRQPPPNWQELVGLRGEERPPMAGDWDDDQKIIHKMK 148

Query: 217 LCRKFYNGEECPFGDRCNYRHEDPRKFRETSV-------ISIRTTGPPIDDGPKTEQSDR 59
           LC+K+YNGEECP+GD+C++ HEDP +FR+ SV       ISI T G P   G  +   + 
Sbjct: 149 LCKKYYNGEECPYGDKCSFLHEDPARFRDDSVRYRESTSISIGTNGSPKSYGDASNNLES 208

Query: 58  SETVNSSVDGNWMNLKPAY 2
           +  VN+ ++    N+K  Y
Sbjct: 209 NRAVNTGLNVFRGNVKSTY 227