BLASTX nr result
ID: Coptis24_contig00015131
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00015131 (877 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002331080.1| predicted protein [Populus trichocarpa] gi|2... 93 9e-17 ref|XP_002527837.1| conserved hypothetical protein [Ricinus comm... 80 6e-13 ref|NP_001237847.1| uncharacterized protein LOC100527815 [Glycin... 63 1e-07 ref|NP_680736.1| uncharacterized protein [Arabidopsis thaliana] ... 58 3e-06 >ref|XP_002331080.1| predicted protein [Populus trichocarpa] gi|222872808|gb|EEF09939.1| predicted protein [Populus trichocarpa] Length = 213 Score = 92.8 bits (229), Expect = 9e-17 Identities = 54/114 (47%), Positives = 68/114 (59%), Gaps = 4/114 (3%) Frame = -3 Query: 668 HCCSCSF----AQPSAPPLPSWLDFEQSHIANTAFGMFGDSSLGQPISEDHIVHEEIVSE 501 HCC CS+ QPSAPPLP WL+ E ++ A +A G+ L P S + +EIV E Sbjct: 37 HCC-CSYPTAPTQPSAPPLPPWLEPELTYEAVSAPGLLSLPELAHP-SHIQVPSQEIVME 94 Query: 500 ITPLCPSFPISSTPSYQQYMVTSPVYGVPVAPATQTEKFGGVFGCAVSVGANLI 339 TP+ P+ P SYQQY+V +PVYGVPV + EK G FGC V+ ANLI Sbjct: 95 TTPIYPTLP-----SYQQYLVPNPVYGVPVEQKPRREKSTGFFGCVVTFCANLI 143 >ref|XP_002527837.1| conserved hypothetical protein [Ricinus communis] gi|223532761|gb|EEF34540.1| conserved hypothetical protein [Ricinus communis] Length = 161 Score = 80.1 bits (196), Expect = 6e-13 Identities = 51/119 (42%), Positives = 69/119 (57%), Gaps = 9/119 (7%) Frame = -3 Query: 668 HCCSCSFA---QPSAPPLPSWLDFEQSH--IANTAFGMFGDSSLGQPISEDHIVHEEIV- 507 HCC CS++ QPSAPPLP WL+ Q+H I++T + S+ +EIV Sbjct: 35 HCC-CSYSTPVQPSAPPLPPWLESAQTHEAISSTEVQQLPEEGYQ---SQFQFPSQEIVV 90 Query: 506 -SEITPLCPSFPISSTP-SYQQYMVTSPVYGVPVAPAT-QTEKFGGVFGCAVSVGANLI 339 ++ + P+ P + TP +YQQY V +PVYGVPV T + E+ G FGC V GANLI Sbjct: 91 ETDTNAIYPTLPNTDTPLTYQQYAVPNPVYGVPVVEQTPRRERSAGFFGCFVKFGANLI 149 >ref|NP_001237847.1| uncharacterized protein LOC100527815 [Glycine max] gi|255633270|gb|ACU16991.1| unknown [Glycine max] Length = 144 Score = 62.8 bits (151), Expect = 1e-07 Identities = 49/118 (41%), Positives = 59/118 (50%), Gaps = 9/118 (7%) Frame = -3 Query: 668 HCCSC---SFAQPSAPPLPS--WLDFEQSHIANTAFGMFGDSSLGQPISEDHIVHEEIVS 504 +CCSC S QPSAPPLPS LDFE S+ +G F + +P E Sbjct: 32 YCCSCYCSSSIQPSAPPLPSSSCLDFEYSN-----YGTFLPTPEPEPEPEPQ-------- 78 Query: 503 EITPLCPSFPISSTPSYQQYMVT--SPVYG--VPVAPATQTEKFGGVFGCAVSVGANL 342 P S SYQQYMV+ PVYG VPV A++TE+ G FGC S G+ L Sbjct: 79 ------PQEIASLNSSYQQYMVSVSEPVYGIPVPVIHASRTERSAGQFGCLFSFGSYL 130 >ref|NP_680736.1| uncharacterized protein [Arabidopsis thaliana] gi|50253462|gb|AAT71933.1| At4g24265 [Arabidopsis thaliana] gi|51972102|gb|AAU15155.1| At4g24265 [Arabidopsis thaliana] gi|332659480|gb|AEE84880.1| uncharacterized protein [Arabidopsis thaliana] Length = 140 Score = 57.8 bits (138), Expect = 3e-06 Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 11/121 (9%) Frame = -3 Query: 668 HCCSCSFA--------QPSAPPLPSWLDFEQSHIANTAFGMFGDSSLGQPISEDHIVH-- 519 H CSC ++ +P+APPLP W D +S + + P + H+ H Sbjct: 23 HHCSCEYSSTAVAVLVEPTAPPLPYWFDETRS--------LCPPETSSFPWTTHHLPHQQ 74 Query: 518 EEIVSEITPLCPSFP-ISSTPSYQQYMVTSPVYGVPVAPATQTEKFGGVFGCAVSVGANL 342 EE + E TPL + SYQQYMV +P V ++ G+FGC + + ++L Sbjct: 75 EETIVEATPLLSQVSDLRIYQSYQQYMVPNPTSNVHFVEPATAKRSVGIFGCVIELSSSL 134 Query: 341 I 339 + Sbjct: 135 V 135