BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00015102
         (1391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517863.1| U3 small nucleolar RNA (U3 snorna) associate...   684   0.0  
ref|XP_002276985.1| PREDICTED: DDB1- and CUL4-associated factor ...   682   0.0  
ref|XP_002327907.1| predicted protein [Populus trichocarpa] gi|2...   681   0.0  
ref|XP_002310410.1| predicted protein [Populus trichocarpa] gi|2...   674   0.0  
ref|XP_003519367.1| PREDICTED: DDB1- and CUL4-associated factor ...   667   0.0  

>ref|XP_002517863.1| U3 small nucleolar RNA (U3 snorna) associated protein, putative
            [Ricinus communis] gi|223542845|gb|EEF44381.1| U3 small
            nucleolar RNA (U3 snorna) associated protein, putative
            [Ricinus communis]
          Length = 452

 Score =  684 bits (1766), Expect = 0.0
 Identities = 331/461 (71%), Positives = 380/461 (82%)
 Frame = -2

Query: 1387 KTISRSKDVITRERSCDIVRVWRNYDPILRPQANATECVRASTAAKLDKIFARPFLWAME 1208
            K ISRS D  TRERS D+ RV+RN+DP LR Q  + E VRA  AAKLDKIFARPF+ AM+
Sbjct: 4    KVISRSSDDFTRERSQDLQRVFRNFDPSLRTQEKSIEYVRALNAAKLDKIFARPFIGAMD 63

Query: 1207 GHVDAVSCMAKNPSYLKGMFSGSMDGDIRLWDLSSRRAVCQFPGHQGAVQGLTTSTDGHV 1028
            GH+DA+SCMAKNP+YLKG+FSGSMDGDIRLWD++SRR VCQFPGHQGAV+GLT STDG +
Sbjct: 64   GHIDAISCMAKNPNYLKGIFSGSMDGDIRLWDIASRRTVCQFPGHQGAVRGLTASTDGCI 123

Query: 1027 LVSCGTDCTVRLWKVPVTELMDYSSDHSSQQPRTPLAIYVRENAFWAVDHQWDGVHFATG 848
            L+SCGTDCT RLWKVPV  +M+  SD  S +   P AIYV +NAFW VDHQWDG  FATG
Sbjct: 124  LISCGTDCTARLWKVPVATMME--SDGPSNRSAEPQAIYVGKNAFWGVDHQWDGELFATG 181

Query: 847  GAQVDIWNVNRSEPVSSFGWVKDTTISVRFNPGVPNLLATSSSDRSITLYDVRLSSPLTK 668
            GAQVDIWN NRS+PV+SF W  DT ISVRFNPG PNLLA S+SDRSITLYD+R+SSP  K
Sbjct: 182  GAQVDIWNHNRSQPVNSFEWGTDTVISVRFNPGEPNLLAASASDRSITLYDLRVSSPARK 241

Query: 667  LIMKTKTNSISWNPMEPMNFTAANEDCNCYSYDARKLDEAKCVHEDHVSAVMDIDYSPTG 488
            LIM+T+TNSI+WNPMEPMNFTAANEDCNCYS+DARKLDEAKCVH+DHVSAVMDID+SPTG
Sbjct: 242  LIMRTRTNSIAWNPMEPMNFTAANEDCNCYSFDARKLDEAKCVHKDHVSAVMDIDFSPTG 301

Query: 487  REFVTGSYDRSVRIFQYNGGHSREIYHSKRMQRVFSVKFSCDGXXXXXXXXXXXXXXXXX 308
            REFVTGSYDR+VRIF YNGGHSREIYH+KRMQRVF VKF                     
Sbjct: 302  REFVTGSYDRTVRIFPYNGGHSREIYHTKRMQRVFCVKF--------------------- 340

Query: 307  XXXXSCDGTYVISGSDDSNLRLWKAEASEQLGILLPRERKKHEHDEAVKNRYKHLPGVKR 128
                SCDG+Y+ISGSDD+NLRLWKA+ASEQLG+LLPRERK+HE++EAVKNRYKHLP +KR
Sbjct: 341  ----SCDGSYIISGSDDTNLRLWKAKASEQLGVLLPRERKRHEYNEAVKNRYKHLPEIKR 396

Query: 127  IMRHRHLPKSTYNAVVMRRTMIEAQRKKYKRKEAHSAPGSM 5
            I+RHRHLPK  Y A  +RRT+ EA+++K  R+ AHS PGS+
Sbjct: 397  IVRHRHLPKPIYKAAEIRRTVTEAEKRKEDRRRAHSTPGSV 437


>ref|XP_002276985.1| PREDICTED: DDB1- and CUL4-associated factor 13 [Vitis vinifera]
            gi|302143337|emb|CBI21898.3| unnamed protein product
            [Vitis vinifera]
          Length = 452

 Score =  682 bits (1760), Expect = 0.0
 Identities = 329/462 (71%), Positives = 381/462 (82%)
 Frame = -2

Query: 1387 KTISRSKDVITRERSCDIVRVWRNYDPILRPQANATECVRASTAAKLDKIFARPFLWAME 1208
            K ISRS D  TRERS D+ RV+RN+DP LR Q  A E VRA  AAKLDK+FARPF+ AM+
Sbjct: 4    KVISRSTDEFTRERSQDLQRVFRNFDPNLRKQEKAVEYVRALNAAKLDKVFARPFIGAMD 63

Query: 1207 GHVDAVSCMAKNPSYLKGMFSGSMDGDIRLWDLSSRRAVCQFPGHQGAVQGLTTSTDGHV 1028
            GH+D++SCMAKNP+YLKG+FSGSMDGDIRLWD++SRR VCQFPGHQGAV+GLT STDG +
Sbjct: 64   GHIDSISCMAKNPNYLKGIFSGSMDGDIRLWDIASRRTVCQFPGHQGAVRGLTASTDGRI 123

Query: 1027 LVSCGTDCTVRLWKVPVTELMDYSSDHSSQQPRTPLAIYVRENAFWAVDHQWDGVHFATG 848
            LVSCGTDCTVRLW VPV  + D  SD SS     PLA++V +NAFW VDHQWDG  FAT 
Sbjct: 124  LVSCGTDCTVRLWNVPVATISD--SDDSSDNSMKPLAVHVWKNAFWGVDHQWDGNLFATA 181

Query: 847  GAQVDIWNVNRSEPVSSFGWVKDTTISVRFNPGVPNLLATSSSDRSITLYDVRLSSPLTK 668
            GAQVDIW+ NRS+PV++F W  D+ I+VRFNPG P++LA S+SDRS+ LYD+R+SSP  K
Sbjct: 182  GAQVDIWDHNRSQPVNTFQWGNDSVIAVRFNPGEPDILAASASDRSLILYDLRMSSPARK 241

Query: 667  LIMKTKTNSISWNPMEPMNFTAANEDCNCYSYDARKLDEAKCVHEDHVSAVMDIDYSPTG 488
            LIM+TKTNSISWNPMEPMNFTAANEDCNCYSYDARKLDEAKCVH+DHVSAVMDIDYSPTG
Sbjct: 242  LIMRTKTNSISWNPMEPMNFTAANEDCNCYSYDARKLDEAKCVHKDHVSAVMDIDYSPTG 301

Query: 487  REFVTGSYDRSVRIFQYNGGHSREIYHSKRMQRVFSVKFSCDGXXXXXXXXXXXXXXXXX 308
            REFVTGSYDR+VRIFQYNGGHSREIYH+KRMQRVF VKF                     
Sbjct: 302  REFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFCVKF--------------------- 340

Query: 307  XXXXSCDGTYVISGSDDSNLRLWKAEASEQLGILLPRERKKHEHDEAVKNRYKHLPGVKR 128
                +CD +YVISGSDD+NLRLWKA+ASEQLG+LLPRERKKHE+ EAVKNRYKHLP VKR
Sbjct: 341  ----TCDASYVISGSDDTNLRLWKAKASEQLGVLLPRERKKHEYHEAVKNRYKHLPEVKR 396

Query: 127  IMRHRHLPKSTYNAVVMRRTMIEAQRKKYKRKEAHSAPGSMT 2
            I+RHRHLPK  + A  +RRTM EA+R+K ++++AHSAPGS++
Sbjct: 397  IVRHRHLPKPIFKAAALRRTMTEAERRKEEKRKAHSAPGSIS 438


>ref|XP_002327907.1| predicted protein [Populus trichocarpa] gi|222837316|gb|EEE75695.1|
            predicted protein [Populus trichocarpa]
          Length = 452

 Score =  681 bits (1758), Expect = 0.0
 Identities = 334/461 (72%), Positives = 380/461 (82%)
 Frame = -2

Query: 1387 KTISRSKDVITRERSCDIVRVWRNYDPILRPQANATECVRASTAAKLDKIFARPFLWAME 1208
            K ISRS D  TRERS D+ RV+ N+DP LR Q  A E  RA  AAKLDKIFARPF+ AM+
Sbjct: 4    KVISRSTDEFTRERSQDLQRVFHNFDPNLRTQEKAVEYQRALNAAKLDKIFARPFIGAMD 63

Query: 1207 GHVDAVSCMAKNPSYLKGMFSGSMDGDIRLWDLSSRRAVCQFPGHQGAVQGLTTSTDGHV 1028
            GH+DAVSCMAKNP+YLKG+FSGSMDGDIRLWD+++RR VCQFPGHQGAV+GLT STDG  
Sbjct: 64   GHIDAVSCMAKNPNYLKGIFSGSMDGDIRLWDIANRRTVCQFPGHQGAVRGLTASTDGST 123

Query: 1027 LVSCGTDCTVRLWKVPVTELMDYSSDHSSQQPRTPLAIYVRENAFWAVDHQWDGVHFATG 848
            LVSCGTDCTVRLW VPV  +MD  SD+ S     P A+Y+ ENAFWAVDHQW+G  FAT 
Sbjct: 124  LVSCGTDCTVRLWNVPVATIMD--SDNLSDCSSEPRAVYMGENAFWAVDHQWNGDLFATA 181

Query: 847  GAQVDIWNVNRSEPVSSFGWVKDTTISVRFNPGVPNLLATSSSDRSITLYDVRLSSPLTK 668
            GAQVDIWN NRS+PV+SF W  D+ ISVRFNPG PNLL TS+SDRSI LYD+R+SSP  K
Sbjct: 182  GAQVDIWNHNRSQPVNSFKWGTDSVISVRFNPGEPNLLVTSASDRSIILYDLRVSSPARK 241

Query: 667  LIMKTKTNSISWNPMEPMNFTAANEDCNCYSYDARKLDEAKCVHEDHVSAVMDIDYSPTG 488
            LIM+TKTNSISWNPMEPMNFTAANEDCNCYSYDARKL+EAKCVH+DHVSAVMDID+SPTG
Sbjct: 242  LIMRTKTNSISWNPMEPMNFTAANEDCNCYSYDARKLEEAKCVHKDHVSAVMDIDFSPTG 301

Query: 487  REFVTGSYDRSVRIFQYNGGHSREIYHSKRMQRVFSVKFSCDGXXXXXXXXXXXXXXXXX 308
            REFVTGSYDR+VRIFQYNGGHSREIYH+KRMQRVF VKF                     
Sbjct: 302  REFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFCVKF--------------------- 340

Query: 307  XXXXSCDGTYVISGSDDSNLRLWKAEASEQLGILLPRERKKHEHDEAVKNRYKHLPGVKR 128
                SCD +YVISGSDD+NLRLWKA+ASEQLG+LLPRE+K+HE++EA+KNRYKHLP VKR
Sbjct: 341  ----SCDASYVISGSDDTNLRLWKAKASEQLGVLLPREQKRHEYNEALKNRYKHLPEVKR 396

Query: 127  IMRHRHLPKSTYNAVVMRRTMIEAQRKKYKRKEAHSAPGSM 5
            I+RHRHLPK  Y A V+RR MIEA+R+K +R++AHSAPGS+
Sbjct: 397  IVRHRHLPKPIYKAGVLRRVMIEAERRKDQRRKAHSAPGSI 437


>ref|XP_002310410.1| predicted protein [Populus trichocarpa] gi|222853313|gb|EEE90860.1|
            predicted protein [Populus trichocarpa]
          Length = 452

 Score =  674 bits (1739), Expect = 0.0
 Identities = 331/461 (71%), Positives = 377/461 (81%)
 Frame = -2

Query: 1387 KTISRSKDVITRERSCDIVRVWRNYDPILRPQANATECVRASTAAKLDKIFARPFLWAME 1208
            K ISRS D  TRERS D+ RV+ N+DP LR Q  A E  RA  AAKLDKIFARPF+ AM+
Sbjct: 4    KVISRSTDEFTRERSQDLQRVFHNFDPNLRTQEKAVEYQRALNAAKLDKIFARPFIGAMD 63

Query: 1207 GHVDAVSCMAKNPSYLKGMFSGSMDGDIRLWDLSSRRAVCQFPGHQGAVQGLTTSTDGHV 1028
            GH+DAVSCMAKNP+YLKG+FSGSMDGDIRLWD+++RR VC+FPGHQGAV+GLT STDG  
Sbjct: 64   GHIDAVSCMAKNPNYLKGIFSGSMDGDIRLWDIANRRTVCRFPGHQGAVRGLTASTDGST 123

Query: 1027 LVSCGTDCTVRLWKVPVTELMDYSSDHSSQQPRTPLAIYVRENAFWAVDHQWDGVHFATG 848
            LVSCGTDCTVRLW VPV  +M+  S +SS     P A+Y+ ENA+WAVDHQW G  FAT 
Sbjct: 124  LVSCGTDCTVRLWNVPVATIME--SGNSSDCSSEPRAVYMGENAYWAVDHQWSGDLFATA 181

Query: 847  GAQVDIWNVNRSEPVSSFGWVKDTTISVRFNPGVPNLLATSSSDRSITLYDVRLSSPLTK 668
            GAQVDIWN NRS+PV+SF W  D+ ISVRFNPG PNLLATS+SDRSI LYD+R+SSP  K
Sbjct: 182  GAQVDIWNHNRSQPVNSFKWGTDSVISVRFNPGEPNLLATSASDRSIMLYDLRVSSPARK 241

Query: 667  LIMKTKTNSISWNPMEPMNFTAANEDCNCYSYDARKLDEAKCVHEDHVSAVMDIDYSPTG 488
            LIM+TKTNSISWNPMEPMNFTAANEDCNCYSYDARK DEAKCVH+DHVSAVMDID+SPTG
Sbjct: 242  LIMRTKTNSISWNPMEPMNFTAANEDCNCYSYDARKFDEAKCVHKDHVSAVMDIDFSPTG 301

Query: 487  REFVTGSYDRSVRIFQYNGGHSREIYHSKRMQRVFSVKFSCDGXXXXXXXXXXXXXXXXX 308
            REFVTGSYDR+VRIFQYNGGHSREIYH+KRMQRVF VKF                     
Sbjct: 302  REFVTGSYDRTVRIFQYNGGHSREIYHTKRMQRVFCVKF--------------------- 340

Query: 307  XXXXSCDGTYVISGSDDSNLRLWKAEASEQLGILLPRERKKHEHDEAVKNRYKHLPGVKR 128
                SCD +YVISGSDD+NLRLWKA+ASEQLGILLPRE+++HE++EA+K RYKHLP VKR
Sbjct: 341  ----SCDASYVISGSDDTNLRLWKAKASEQLGILLPREQRRHEYNEALKTRYKHLPEVKR 396

Query: 127  IMRHRHLPKSTYNAVVMRRTMIEAQRKKYKRKEAHSAPGSM 5
            I+RHRHLPK  Y A V+RR MIEA+R+K  R++AHSAPGS+
Sbjct: 397  IVRHRHLPKPIYKAGVLRRVMIEAERRKDHRRKAHSAPGSI 437


>ref|XP_003519367.1| PREDICTED: DDB1- and CUL4-associated factor 13-like [Glycine max]
          Length = 452

 Score =  667 bits (1722), Expect = 0.0
 Identities = 322/462 (69%), Positives = 374/462 (80%)
 Frame = -2

Query: 1387 KTISRSKDVITRERSCDIVRVWRNYDPILRPQANATECVRASTAAKLDKIFARPFLWAME 1208
            K ISRS D  TRERS D+ RV+RNYDP LRPQ  A E VRA  A KLDKIFARPF+ A++
Sbjct: 4    KVISRSVDEFTRERSQDLQRVFRNYDPSLRPQEKAVEYVRAVNAVKLDKIFARPFIGALD 63

Query: 1207 GHVDAVSCMAKNPSYLKGMFSGSMDGDIRLWDLSSRRAVCQFPGHQGAVQGLTTSTDGHV 1028
            GHVDAVSCM +NPS LKG+FS SMDGDIRLWDL++RR VCQFPGH+GAV+GLT STDG +
Sbjct: 64   GHVDAVSCMTRNPSQLKGIFSSSMDGDIRLWDLAARRTVCQFPGHRGAVRGLTASTDGRI 123

Query: 1027 LVSCGTDCTVRLWKVPVTELMDYSSDHSSQQPRTPLAIYVRENAFWAVDHQWDGVHFATG 848
            LVSCGTDCT+RLW VP+T LM+  SD S++    P ++YV +NAFW  DHQWDG HFAT 
Sbjct: 124  LVSCGTDCTIRLWSVPITTLME--SDDSTKSTVEPASVYVWKNAFWGADHQWDGEHFATA 181

Query: 847  GAQVDIWNVNRSEPVSSFGWVKDTTISVRFNPGVPNLLATSSSDRSITLYDVRLSSPLTK 668
            GAQVDIWN NRS+P++SF W  DT ISVRFNPG PNLLATS+SDRSI LYD+R+SSP+ K
Sbjct: 182  GAQVDIWNHNRSQPINSFEWGSDTVISVRFNPGEPNLLATSASDRSIILYDLRMSSPVRK 241

Query: 667  LIMKTKTNSISWNPMEPMNFTAANEDCNCYSYDARKLDEAKCVHEDHVSAVMDIDYSPTG 488
            +IM TKTNSI WNPMEP+NFTAANED NCYSYDARKLDEAKCVH DHVSAVMD+DYSPTG
Sbjct: 242  MIMMTKTNSICWNPMEPINFTAANEDGNCYSYDARKLDEAKCVHRDHVSAVMDVDYSPTG 301

Query: 487  REFVTGSYDRSVRIFQYNGGHSREIYHSKRMQRVFSVKFSCDGXXXXXXXXXXXXXXXXX 308
            REFVTGSYDR+VRIFQYNGGHS+EIYH+KRMQRVF+VKF                     
Sbjct: 302  REFVTGSYDRTVRIFQYNGGHSKEIYHTKRMQRVFAVKF--------------------- 340

Query: 307  XXXXSCDGTYVISGSDDSNLRLWKAEASEQLGILLPRERKKHEHDEAVKNRYKHLPGVKR 128
                S DG+YVISGSDD+NLRLWKA+ASEQLG++LPRERKKHE+ EA+K RYKHLP V R
Sbjct: 341  ----SGDGSYVISGSDDTNLRLWKAKASEQLGVILPRERKKHEYHEAIKKRYKHLPEVNR 396

Query: 127  IMRHRHLPKSTYNAVVMRRTMIEAQRKKYKRKEAHSAPGSMT 2
            I RHRHLP+  + A  + R M +A+R+K ++++AHSAPGS+T
Sbjct: 397  IARHRHLPRPIFKASALMRVMADAKRRKEEKRKAHSAPGSIT 438