BLASTX nr result

ID: Coptis24_contig00014918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014918
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138654.1| PREDICTED: vacuolar protein sorting-associat...   127   1e-27
gb|AFK47868.1| unknown [Medicago truncatula]                          126   2e-27
ref|XP_003590925.1| Vacuolar protein sorting-associated protein-...   126   2e-27
ref|XP_002307938.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-27
ref|XP_003554727.1| PREDICTED: vacuolar protein sorting-associat...   125   4e-27

>ref|XP_004138654.1| PREDICTED: vacuolar protein sorting-associated protein 52 homolog
           [Cucumis sativus] gi|449490141|ref|XP_004158519.1|
           PREDICTED: vacuolar protein sorting-associated protein
           52 homolog [Cucumis sativus]
          Length = 698

 Score =  127 bits (318), Expect = 1e-27
 Identities = 60/85 (70%), Positives = 70/85 (82%)
 Frame = -1

Query: 348 VHLVQLWFIMSQKQIPCLDSYWKMINILLWTHLKLVLDMHLNSLCTANVETLWEDDVHPH 169
           +H  QL  IMS+++IPCLDSY   +NI LW   K+V DMHL+SL  ANV+TLWEDDVHPH
Sbjct: 427 IHQHQL--IMSRRRIPCLDSYLDKVNIALWPRFKMVFDMHLSSLRNANVKTLWEDDVHPH 484

Query: 168 YVMRRYAEFTASLIHLSFEYGDGQV 94
           YVMRRYAEFTASLIHL+ EYGDGQ+
Sbjct: 485 YVMRRYAEFTASLIHLNVEYGDGQL 509


>gb|AFK47868.1| unknown [Medicago truncatula]
          Length = 327

 Score =  126 bits (317), Expect = 2e-27
 Identities = 60/85 (70%), Positives = 70/85 (82%)
 Frame = -1

Query: 348 VHLVQLWFIMSQKQIPCLDSYWKMINILLWTHLKLVLDMHLNSLCTANVETLWEDDVHPH 169
           +H  QL  IMS+++IPCLDSY   +NI LW   K+V DMHLNSL  ANV+TLWEDDVHPH
Sbjct: 56  IHQHQL--IMSRRRIPCLDSYLDKVNISLWPRFKMVFDMHLNSLRNANVKTLWEDDVHPH 113

Query: 168 YVMRRYAEFTASLIHLSFEYGDGQV 94
           YVMRRYAEFTASLIHL+ E+GDGQ+
Sbjct: 114 YVMRRYAEFTASLIHLNSEFGDGQL 138


>ref|XP_003590925.1| Vacuolar protein sorting-associated protein-like protein [Medicago
           truncatula] gi|355479973|gb|AES61176.1| Vacuolar protein
           sorting-associated protein-like protein [Medicago
           truncatula]
          Length = 699

 Score =  126 bits (317), Expect = 2e-27
 Identities = 60/85 (70%), Positives = 70/85 (82%)
 Frame = -1

Query: 348 VHLVQLWFIMSQKQIPCLDSYWKMINILLWTHLKLVLDMHLNSLCTANVETLWEDDVHPH 169
           +H  QL  IMS+++IPCLDSY   +NI LW   K+V DMHLNSL  ANV+TLWEDDVHPH
Sbjct: 428 IHQHQL--IMSRRRIPCLDSYLDKVNISLWPRFKMVFDMHLNSLRNANVKTLWEDDVHPH 485

Query: 168 YVMRRYAEFTASLIHLSFEYGDGQV 94
           YVMRRYAEFTASLIHL+ E+GDGQ+
Sbjct: 486 YVMRRYAEFTASLIHLNSEFGDGQL 510


>ref|XP_002307938.1| predicted protein [Populus trichocarpa] gi|222853914|gb|EEE91461.1|
           predicted protein [Populus trichocarpa]
          Length = 718

 Score =  125 bits (315), Expect = 3e-27
 Identities = 59/85 (69%), Positives = 70/85 (82%)
 Frame = -1

Query: 348 VHLVQLWFIMSQKQIPCLDSYWKMINILLWTHLKLVLDMHLNSLCTANVETLWEDDVHPH 169
           +H  QL  IMS+++IPCLDSY   +NI LW   K+V D+HL+SL  ANV+TLWEDDVHPH
Sbjct: 447 IHQHQL--IMSRRRIPCLDSYLDKVNIALWPRFKMVFDLHLSSLRNANVKTLWEDDVHPH 504

Query: 168 YVMRRYAEFTASLIHLSFEYGDGQV 94
           YVMRRYAEFTASLIHL+ EYGDGQ+
Sbjct: 505 YVMRRYAEFTASLIHLNVEYGDGQL 529


>ref|XP_003554727.1| PREDICTED: vacuolar protein sorting-associated protein 52 homolog
           [Glycine max]
          Length = 707

 Score =  125 bits (314), Expect = 4e-27
 Identities = 61/85 (71%), Positives = 69/85 (81%)
 Frame = -1

Query: 348 VHLVQLWFIMSQKQIPCLDSYWKMINILLWTHLKLVLDMHLNSLCTANVETLWEDDVHPH 169
           +H  QL  IMS+++IPCLDSY   +NI LW   KLV DMHLNSL  ANV+TLWEDDVHPH
Sbjct: 436 IHKHQL--IMSRRRIPCLDSYLDKVNISLWPRFKLVFDMHLNSLRNANVKTLWEDDVHPH 493

Query: 168 YVMRRYAEFTASLIHLSFEYGDGQV 94
           YVMRRYAEFTASLIHL+ E GDGQ+
Sbjct: 494 YVMRRYAEFTASLIHLNAECGDGQL 518


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