BLASTX nr result

ID: Coptis24_contig00014883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014883
         (1171 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003557056.1| PREDICTED: uncharacterized protein LOC100790...   110   9e-22
ref|XP_002315691.1| predicted protein [Populus trichocarpa] gi|2...   108   3e-21
emb|CCD74514.1| uncharacterized protein [Arabidopsis halleri sub...    99   3e-18
ref|XP_002888142.1| hypothetical protein ARALYDRAFT_475285 [Arab...    99   3e-18
emb|CBI28546.3| unnamed protein product [Vitis vinifera]               99   3e-18

>ref|XP_003557056.1| PREDICTED: uncharacterized protein LOC100790078, partial [Glycine
           max]
          Length = 456

 Score =  110 bits (274), Expect = 9e-22
 Identities = 54/84 (64%), Positives = 68/84 (80%)
 Frame = -1

Query: 730 LSCFHLQIQNYAPDLARTIAGLIFSSDDSEFQGECITLLGLQPQETGKEKVEDCITKKIN 551
           LS   ++I++YAPDLA+TIAGLI SS D +FQGEC +LLGLQ QE G E VE+CI ++I 
Sbjct: 356 LSSRAVEIRSYAPDLAKTIAGLILSSSDLDFQGECFSLLGLQSQEVGTEIVENCIEERIV 415

Query: 550 AVIGMNDRKSQKNREPAPFLFEED 479
           +VI MND+KS  ++EPAPFLFEED
Sbjct: 416 SVIEMNDKKSYNSQEPAPFLFEED 439


>ref|XP_002315691.1| predicted protein [Populus trichocarpa] gi|222864731|gb|EEF01862.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score =  108 bits (270), Expect = 3e-21
 Identities = 53/86 (61%), Positives = 69/86 (80%)
 Frame = -1

Query: 733 MLSCFHLQIQNYAPDLARTIAGLIFSSDDSEFQGECITLLGLQPQETGKEKVEDCITKKI 554
           +LS   L+I ++APDLAR+IAGLI SS+D +FQGEC +LLGLQ +E G + VEDCI +KI
Sbjct: 280 LLSAHALKICSHAPDLARSIAGLILSSNDPDFQGECFSLLGLQSREIGADVVEDCIQEKI 339

Query: 553 NAVIGMNDRKSQKNREPAPFLFEEDC 476
            +VI MNDRKS++ +  APFLFE+DC
Sbjct: 340 VSVIEMNDRKSRQRKVVAPFLFEDDC 365


>emb|CCD74514.1| uncharacterized protein [Arabidopsis halleri subsp. halleri]
          Length = 537

 Score = 98.6 bits (244), Expect = 3e-18
 Identities = 48/83 (57%), Positives = 64/83 (77%)
 Frame = -1

Query: 736 FMLSCFHLQIQNYAPDLARTIAGLIFSSDDSEFQGECITLLGLQPQETGKEKVEDCITKK 557
           F+LS    +I +Y PDLAR+IAGLIFSS D +FQG+C+++LG Q Q+  ++ VED I +K
Sbjct: 382 FLLSSHARKICSYVPDLARSIAGLIFSSTDLDFQGDCLSVLGFQTQKVERDTVEDYIQRK 441

Query: 556 INAVIGMNDRKSQKNREPAPFLF 488
           I  VIGMN+RK QK++E APFLF
Sbjct: 442 IVTVIGMNERKPQKDQEAAPFLF 464


>ref|XP_002888142.1| hypothetical protein ARALYDRAFT_475285 [Arabidopsis lyrata subsp.
           lyrata] gi|297333983|gb|EFH64401.1| hypothetical protein
           ARALYDRAFT_475285 [Arabidopsis lyrata subsp. lyrata]
          Length = 473

 Score = 98.6 bits (244), Expect = 3e-18
 Identities = 48/83 (57%), Positives = 64/83 (77%)
 Frame = -1

Query: 736 FMLSCFHLQIQNYAPDLARTIAGLIFSSDDSEFQGECITLLGLQPQETGKEKVEDCITKK 557
           F+LS    +I +Y PDLAR+IAGLIFSS D +FQG+C+++LG Q Q+  ++ VED I +K
Sbjct: 366 FLLSSHARKICSYVPDLARSIAGLIFSSTDLDFQGDCLSVLGFQTQKVERDTVEDYIQRK 425

Query: 556 INAVIGMNDRKSQKNREPAPFLF 488
           I  VIGMN+RK QK++E APFLF
Sbjct: 426 IVTVIGMNERKPQKDQEAAPFLF 448


>emb|CBI28546.3| unnamed protein product [Vitis vinifera]
          Length = 463

 Score = 98.6 bits (244), Expect = 3e-18
 Identities = 51/87 (58%), Positives = 64/87 (73%)
 Frame = -1

Query: 733 MLSCFHLQIQNYAPDLARTIAGLIFSSDDSEFQGECITLLGLQPQETGKEKVEDCITKKI 554
           +LS   L+I +YAPDLAR+I GLI SS DS+FQ EC++LLGLQ QE     VED I +KI
Sbjct: 356 LLSAHALKICSYAPDLARSITGLILSSSDSDFQKECLSLLGLQSQEVEGGIVEDRIKEKI 415

Query: 553 NAVIGMNDRKSQKNREPAPFLFEEDCI 473
            +V+ +NDRK Q++RE   FLFE DCI
Sbjct: 416 ISVVEINDRKPQRSREAPSFLFENDCI 442


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