BLASTX nr result

ID: Coptis24_contig00014859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014859
         (1000 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304822.1| predicted protein [Populus trichocarpa] gi|2...   172   9e-41
ref|XP_002525574.1| r2r3-myb transcription factor, putative [Ric...   170   6e-40
ref|XP_002275846.1| PREDICTED: transcription factor GAMYB [Vitis...   169   7e-40
emb|CAN78897.1| hypothetical protein VITISV_025421 [Vitis vinifera]   169   7e-40
dbj|BAJ61445.1| R2R3-MYB transcription factor [Lupinus albus]         123   8e-26

>ref|XP_002304822.1| predicted protein [Populus trichocarpa] gi|222842254|gb|EEE79801.1|
           predicted protein [Populus trichocarpa]
          Length = 558

 Score =  172 bits (437), Expect = 9e-41
 Identities = 97/194 (50%), Positives = 121/194 (62%), Gaps = 5/194 (2%)
 Frame = +1

Query: 172 SPRNSGLLDALLHESQALSGTKNQXXXXXXXXCVVTPGDIVDSSTLNC-ETEWEEYGDPI 348
           SPRNSGLLDALL+E++ LS  KNQ          +TPGD  D S LN  ETEWE+YGDPI
Sbjct: 364 SPRNSGLLDALLYEARTLSSAKNQSSDKSSNSSTITPGDNADCSALNISETEWEDYGDPI 423

Query: 349 SPLCRSAASVFNESTPVS--GNSLDEPPAPRGLFGFGIKTEPVDHDTSPDEKKQIPTG-S 519
           SPL   AAS+F+E TP+S  G+SLDE P    L    +K EPVDH  + D +K+  T   
Sbjct: 424 SPLGHPAASLFSECTPISASGSSLDESPPTETLTECNMKLEPVDHTWTADREKESYTQLD 483

Query: 520 ITRPDALLDAAWSEQSYECAKDQSILTDAISTLIGEDICGDYKSKFT-EXXXXXXXXXXX 696
           ITRPDALLD+ W E      KDQ I+T+AI+TL+G+D+  +YK                 
Sbjct: 484 ITRPDALLDSDWLEHDSGYGKDQVIMTEAIATLLGDDLSSEYKQMAAGASTDHGWGLGSC 543

Query: 697 FWNSLPAVCQMSQL 738
            WN++PAVCQMS+L
Sbjct: 544 SWNNMPAVCQMSEL 557


>ref|XP_002525574.1| r2r3-myb transcription factor, putative [Ricinus communis]
           gi|223535153|gb|EEF36833.1| r2r3-myb transcription
           factor, putative [Ricinus communis]
          Length = 556

 Score =  170 bits (430), Expect = 6e-40
 Identities = 95/195 (48%), Positives = 121/195 (62%), Gaps = 6/195 (3%)
 Frame = +1

Query: 172 SPRNSGLLDALLHESQALSGTKNQXXXXXXXXCVVTPGDIVDSSTLN-CETEWEEYGDPI 348
           SPRNSGLLDALL+E++ALS  KN           VTPG++ + S +N CETEWE+YGDP+
Sbjct: 361 SPRNSGLLDALLYEAKALSSAKNHSSEKSSNSSTVTPGELAECSAINICETEWEDYGDPL 420

Query: 349 SPLCRSAASVFNESTPV--SGNSLDEPPAPRGLFGFGIKTEPVDHDTSPDEKKQIPTG-S 519
           SPL  +A S+F+E TP+  SG+SLDEPP      G  +KTE V    SP+  K+  T   
Sbjct: 421 SPLGHTATSLFSECTPISASGSSLDEPPPTDTFTGCIVKTELVSQPWSPERDKETTTRVD 480

Query: 520 ITRPDALLDAAWSEQSYECAKDQSILTDAISTLIGEDICGDYK--SKFTEXXXXXXXXXX 693
           ITRPDALL + W  Q     KDQ I+TD I+TL+G+D+  DYK  S              
Sbjct: 481 ITRPDALLASDWLGQGSGYIKDQVIMTDNIATLLGDDLSSDYKQMSAGASTSNQVWGLGS 540

Query: 694 XFWNSLPAVCQMSQL 738
             WN++PAVCQMS+L
Sbjct: 541 CAWNNMPAVCQMSEL 555


>ref|XP_002275846.1| PREDICTED: transcription factor GAMYB [Vitis vinifera]
           gi|298205121|emb|CBI40642.3| unnamed protein product
           [Vitis vinifera]
          Length = 559

 Score =  169 bits (429), Expect = 7e-40
 Identities = 91/196 (46%), Positives = 118/196 (60%), Gaps = 5/196 (2%)
 Frame = +1

Query: 166 CLSPRNSGLLDALLHESQALSGTKNQXXXXXXXXCVVTPGDIVDSSTLNCETEWEEYGDP 345
           CLSPRNSGLLDALLHE++ +S  KN           VTPGD+ DS    CETEWE+YGDP
Sbjct: 363 CLSPRNSGLLDALLHEAKTISSGKNHLSDKSANSSTVTPGDLADSCLNMCETEWEDYGDP 422

Query: 346 ISPLCRSAASVFNESTPV--SGNSLDEPPAPRGLFGFGIKTEPVDHDTSPDEKKQIPTG- 516
           ISPL  S  S+F+E TP+  SG+SLDE P      G  +K EPVD   +PD +K+  T  
Sbjct: 423 ISPLGHSTTSIFSECTPISASGSSLDEHPPSETFPGCNVKAEPVDQVWTPDGEKETSTQL 482

Query: 517 SITRPDALLDAAWSEQSYECAKDQSILTDAISTLIGEDICGDYK--SKFTEXXXXXXXXX 690
             +RPD LL + W +QS    KDQ+++ DA+++L  +D   +YK  +  T          
Sbjct: 483 DFSRPDVLLGSNWIDQSTGGPKDQAMMNDAVASLFSDDFGNNYKNMASGTPTSNQGWGLG 542

Query: 691 XXFWNSLPAVCQMSQL 738
              WN+LP VCQMS+L
Sbjct: 543 CCAWNNLPPVCQMSEL 558


>emb|CAN78897.1| hypothetical protein VITISV_025421 [Vitis vinifera]
          Length = 455

 Score =  169 bits (429), Expect = 7e-40
 Identities = 91/196 (46%), Positives = 118/196 (60%), Gaps = 5/196 (2%)
 Frame = +1

Query: 166 CLSPRNSGLLDALLHESQALSGTKNQXXXXXXXXCVVTPGDIVDSSTLNCETEWEEYGDP 345
           CLSPRNSGLLDALLHE++ +S  KN           VTPGD+ DS    CETEWE+YGDP
Sbjct: 259 CLSPRNSGLLDALLHEAKTISSGKNHLSDKSANSSTVTPGDLADSCLNMCETEWEDYGDP 318

Query: 346 ISPLCRSAASVFNESTPV--SGNSLDEPPAPRGLFGFGIKTEPVDHDTSPDEKKQIPTG- 516
           ISPL  S  S+F+E TP+  SG+SLDE P      G  +K EPVD   +PD +K+  T  
Sbjct: 319 ISPLGHSTTSIFSECTPISASGSSLDEHPPSETFPGCSVKAEPVDQVWTPDGEKETSTQL 378

Query: 517 SITRPDALLDAAWSEQSYECAKDQSILTDAISTLIGEDICGDYK--SKFTEXXXXXXXXX 690
             +RPD LL + W +QS    KDQ+++ DA+++L  +D   +YK  +  T          
Sbjct: 379 DFSRPDVLLGSNWIDQSTGGPKDQAMMNDAVASLFSDDFGNNYKNMASGTPTSNQGWGLG 438

Query: 691 XXFWNSLPAVCQMSQL 738
              WN+LP VCQMS+L
Sbjct: 439 CCAWNNLPPVCQMSEL 454


>dbj|BAJ61445.1| R2R3-MYB transcription factor [Lupinus albus]
          Length = 466

 Score =  123 bits (308), Expect = 8e-26
 Identities = 70/164 (42%), Positives = 98/164 (59%), Gaps = 3/164 (1%)
 Frame = +1

Query: 166 CLSPRNSGLLDALLHESQALSGTKNQXXXXXXXXCVVTPGDIVDSSTLNC-ETEWEEYGD 342
           C SP+NSGLLDAL+++++ +S +K              PG   DSSTLN  ETEWE+Y D
Sbjct: 275 CSSPQNSGLLDALVYQAKTMSSSKKHYSDEISNSSTAIPGHRADSSTLNMYETEWEDYAD 334

Query: 343 PISPLCRSAASVFNESTPVSG-NSLDEPPAPRGLFGFGIKTEPVDHDTSPDEKKQ-IPTG 516
           P+SP    A S+ NE   ++  NSLDE P  +   G  +K E  D   +P+ + Q +   
Sbjct: 335 PVSPF--GATSILNECPAIANANSLDETPLDQTFNGNLVKLESADQVWTPNSEDQSMSLL 392

Query: 517 SITRPDALLDAAWSEQSYECAKDQSILTDAISTLIGEDICGDYK 648
           +IT PD LLD  W +Q  + +K+Q+I TDA+STL G+D+  DYK
Sbjct: 393 NITWPDILLDEDWLQQDSDNSKNQTIRTDAMSTLFGDDLATDYK 436


Top