BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014808
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271482.1| PREDICTED: 50S ribosomal protein L12, chloro...   143   1e-32
emb|CAN83934.1| hypothetical protein VITISV_035768 [Vitis vinifera]   143   1e-32
ref|XP_004141864.1| PREDICTED: 50S ribosomal protein L7/L12-like...   139   3e-31
ref|XP_002328780.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_002868977.1| ribosomal protein L12 family protein [Arabid...   115   2e-26

>ref|XP_002271482.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Vitis
           vinifera]
          Length = 165

 Score =  143 bits (361), Expect = 1e-32
 Identities = 76/107 (71%), Positives = 86/107 (80%), Gaps = 1/107 (0%)
 Frame = +1

Query: 160 RADYQILYRLKLGLNQYGPAISGLDXXXXXXXXXXXXXEESKA-EQTAFEIKLEKFDTAA 336
           R DY IL+RLKLGLN+YGPA+SGL               ++KA E+TAF+IKLEKFD AA
Sbjct: 50  RYDYSILFRLKLGLNKYGPAVSGLASADSASAGSGSAPADAKAAEKTAFDIKLEKFDAAA 109

Query: 337 KIKIIKEVQTFTDLGLKEAKDLLEKVPVVLKKGVTKEEGNRIIEKLK 477
           KIKIIKEV+TFTDLGLKEAKDL+EK PVVLKKGVTKEEGN I+EKLK
Sbjct: 110 KIKIIKEVRTFTDLGLKEAKDLVEKAPVVLKKGVTKEEGNPIVEKLK 156


>emb|CAN83934.1| hypothetical protein VITISV_035768 [Vitis vinifera]
          Length = 615

 Score =  143 bits (361), Expect = 1e-32
 Identities = 76/107 (71%), Positives = 86/107 (80%), Gaps = 1/107 (0%)
 Frame = +1

Query: 160 RADYQILYRLKLGLNQYGPAISGLDXXXXXXXXXXXXXEESKA-EQTAFEIKLEKFDTAA 336
           R DY IL+RLKLGLN+YGPA+SGL               ++KA E+TAF+IKLEKFD AA
Sbjct: 500 RYDYSILFRLKLGLNKYGPAVSGLASADSASAGSGSAPADAKAAEKTAFDIKLEKFDAAA 559

Query: 337 KIKIIKEVQTFTDLGLKEAKDLLEKVPVVLKKGVTKEEGNRIIEKLK 477
           KIKIIKEV+TFTDLGLKEAKDL+EK PVVLKKGVTKEEGN I+EKLK
Sbjct: 560 KIKIIKEVRTFTDLGLKEAKDLVEKAPVVLKKGVTKEEGNPIVEKLK 606


>ref|XP_004141864.1| PREDICTED: 50S ribosomal protein L7/L12-like [Cucumis sativus]
           gi|449499867|ref|XP_004160938.1| PREDICTED: 50S
           ribosomal protein L7/L12-like [Cucumis sativus]
          Length = 168

 Score =  139 bits (349), Expect = 3e-31
 Identities = 73/106 (68%), Positives = 84/106 (79%)
 Frame = +1

Query: 160 RADYQILYRLKLGLNQYGPAISGLDXXXXXXXXXXXXXEESKAEQTAFEIKLEKFDTAAK 339
           R DY IL+R K+GLN+YGPA+SGL              E  +AE+T F+IKLEKFD AAK
Sbjct: 55  RHDYAILFRYKMGLNKYGPAVSGLSAPGSAAAGSAAA-ETKEAEKTVFDIKLEKFDAAAK 113

Query: 340 IKIIKEVQTFTDLGLKEAKDLLEKVPVVLKKGVTKEEGNRIIEKLK 477
           IKIIKEV+TFTDLGLKEAKDL+EKVPVVLKKGVTK++GN IIEKLK
Sbjct: 114 IKIIKEVRTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEKLK 159


>ref|XP_002328780.1| predicted protein [Populus trichocarpa] gi|222839078|gb|EEE77429.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score =  130 bits (326), Expect = 1e-28
 Identities = 70/108 (64%), Positives = 81/108 (75%), Gaps = 2/108 (1%)
 Frame = +1

Query: 160 RADYQILYRLKLGLNQYGPAISG--LDXXXXXXXXXXXXXEESKAEQTAFEIKLEKFDTA 333
           R DY IL+R K+GL +YGPA+SG  L                + AE+TAF+IKLEKFD A
Sbjct: 57  RHDYAILFRHKMGLGRYGPAVSGAILSGPAAPGSASGDVKTAAAAEKTAFDIKLEKFDAA 116

Query: 334 AKIKIIKEVQTFTDLGLKEAKDLLEKVPVVLKKGVTKEEGNRIIEKLK 477
           AKIK+IKEV+TFTDLGLKEAKDL+EKVPVVLKKG+TKEE   IIEKLK
Sbjct: 117 AKIKVIKEVRTFTDLGLKEAKDLVEKVPVVLKKGLTKEEAGPIIEKLK 164


>ref|XP_002868977.1| ribosomal protein L12 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297314813|gb|EFH45236.1| ribosomal protein
           L12 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 167

 Score =  115 bits (289), Expect(2) = 2e-26
 Identities = 58/104 (55%), Positives = 77/104 (74%)
 Frame = +1

Query: 166 DYQILYRLKLGLNQYGPAISGLDXXXXXXXXXXXXXEESKAEQTAFEIKLEKFDTAAKIK 345
           DY IL+  KLGLN+YG A++                E   AE+TAF++KLEKF+TA+KIK
Sbjct: 59  DYSILFSHKLGLNRYGSAVA----VAGSDGEASGSTETKTAEKTAFDVKLEKFETASKIK 114

Query: 346 IIKEVQTFTDLGLKEAKDLLEKVPVVLKKGVTKEEGNRIIEKLK 477
           +IKE++ FTDLGLKEAK+L+EK PV++KKG+TKEE  +I+EKLK
Sbjct: 115 VIKEIRAFTDLGLKEAKELVEKAPVIVKKGLTKEEAEKIMEKLK 158



 Score = 28.1 bits (61), Expect(2) = 2e-26
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = +2

Query: 89  TLQRSLCTATATETRTMKLGRIAGELI 169
           T  R LC   + E RT KL RIA +L+
Sbjct: 24  TATRHLCAVASPEARTKKLERIADDLL 50