BLASTX nr result
ID: Coptis24_contig00014667
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00014667
(2207 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268789.1| PREDICTED: WD repeat-containing protein 26 [... 624 e-176
ref|XP_002533626.1| WD-repeat protein, putative [Ricinus communi... 600 e-169
ref|XP_003554312.1| PREDICTED: WD repeat-containing protein 26-l... 579 e-163
ref|NP_199205.1| transducin/WD40 domain-containing protein [Arab... 577 e-162
ref|XP_002865396.1| transducin family protein [Arabidopsis lyrat... 572 e-160
>ref|XP_002268789.1| PREDICTED: WD repeat-containing protein 26 [Vitis vinifera]
Length = 520
Score = 624 bits (1608), Expect = e-176
Identities = 313/507 (61%), Positives = 372/507 (73%)
Frame = +3
Query: 96 INKTEFTRLIISYLYSLGYXXXXXXXXXXXXTPLNPPQLLSLETQILNNSSNFDTCIETI 275
I K EF R+II L+SLGY P+ LE Q+LN +N++ I +
Sbjct: 14 IKKHEFVRIIIQCLHSLGYKNSASCLESESGISHKSPESKLLEMQVLN--ANWEDSIGIL 71
Query: 276 QNFDTLPEEVCSSALFLLFKHIFTEFLNTGDDLSALSILRKRISVLGVDKERVHKLASGI 455
+ L +E +SALFL+ + E L+ GDD SAL+ILRKR+S L V +E+VH LA+G+
Sbjct: 72 NGIEDLTDETRASALFLVLQQCLLECLSRGDDSSALTILRKRVSPLKVGREKVHNLAAGM 131
Query: 456 VFSGNEDMGSCCSSNEDXXXXXXXXXXXXXXXXFPPHVIVPDRRLECLVERAVLAQRDAC 635
+ MG S+ PP + +P+ RLE LVE A+ AQ D+C
Sbjct: 132 LSLKEMGMGKIDDSS---ICELRRKSLVELEKLLPPPITLPEGRLEHLVETAITAQMDSC 188
Query: 636 VYHNSSNEISLYEDHCCGRDQIPTETLQILDSHEDEVWFVQFSNNGDYLASSSSDHTAII 815
+YHNS EISLYEDH CGRDQIPT+T+QIL H+ EVWFVQFS+NG+YLASSS D AII
Sbjct: 189 IYHNSFREISLYEDHYCGRDQIPTQTVQILTEHKHEVWFVQFSHNGEYLASSSRDCAAII 248
Query: 816 WKVSEEGILSLKHTLRSHQNPVSFVAWSPDDTMLLTCGNGEVLKLWDVETGTCKHTFGEK 995
WKV E G+L L+H L+SHQNPVSFVAWSPDDTMLLTCGNGEVLKLWDVETGTCKHTFG+
Sbjct: 249 WKVLENGVLILRHMLQSHQNPVSFVAWSPDDTMLLTCGNGEVLKLWDVETGTCKHTFGDH 308
Query: 996 SPIVSSCAWLPDSKRLVCGSSDPNKCIYMWDLDGNELEAWRGVRMPKVSDLAVTPDGEHL 1175
IVSSCAW PDSKR+VCGSSDP K IYMWD DGNE++AW+G+RMPKV DLAVTPDGE+L
Sbjct: 309 GFIVSSCAWFPDSKRIVCGSSDPEKGIYMWDCDGNEIKAWKGMRMPKVLDLAVTPDGENL 368
Query: 1176 ISICSEKDIRIYSYRSKTERVVKEDHPITSLSVSKNSEFLIVNLNSQEIHLWEIVETGNK 1355
ISI SEK+IRI + + E V+ ED+ ITSLSVS++S+FLIVNLNS+EIH+W++ K
Sbjct: 369 ISIFSEKEIRILNVGTNAEHVISEDYSITSLSVSRDSKFLIVNLNSEEIHMWDVAGKWEK 428
Query: 1356 PLKYTGHKQGKYVIRSCFGGVDCMFIASGSENSQVYIWNRQNQKPLEVLTGHSMTVNCVS 1535
PLKYTGHKQ KYVIRSCFGG C FIASGSENS VYIWNR N PLEVL+GH MTVNCVS
Sbjct: 429 PLKYTGHKQNKYVIRSCFGGFHCTFIASGSENSLVYIWNRGNSTPLEVLSGHLMTVNCVS 488
Query: 1536 WNPTQPQMLASASDDQTIRIWGPSRKK 1616
WNP + QMLASASDD TIRIWGPS+ +
Sbjct: 489 WNPRRHQMLASASDDHTIRIWGPSQPR 515
>ref|XP_002533626.1| WD-repeat protein, putative [Ricinus communis]
gi|223526484|gb|EEF28755.1| WD-repeat protein, putative
[Ricinus communis]
Length = 523
Score = 600 bits (1546), Expect = e-169
Identities = 301/507 (59%), Positives = 364/507 (71%)
Frame = +3
Query: 96 INKTEFTRLIISYLYSLGYXXXXXXXXXXXXTPLNPPQLLSLETQILNNSSNFDTCIETI 275
I + EF R+II L+SLGY LE+QIL N++ C+ T+
Sbjct: 14 IKRHEFVRVIIQSLWSLGYKKSASCLEIESGISYKSVDFELLESQILEG--NWNGCVNTL 71
Query: 276 QNFDTLPEEVCSSALFLLFKHIFTEFLNTGDDLSALSILRKRISVLGVDKERVHKLASGI 455
L +E +SALFL+ K E L+ GDD AL++LRK++ L + +E+V LA +
Sbjct: 72 NTVKELMDETRASALFLVIKQCLLECLSCGDDSMALAVLRKQVPALRLGREKVCNLAYNL 131
Query: 456 VFSGNEDMGSCCSSNEDXXXXXXXXXXXXXXXXFPPHVIVPDRRLECLVERAVLAQRDAC 635
+ D+ + ++ PP +++P+ RLE LVE A+ AQ D+C
Sbjct: 132 LCLKEVDLSK---TYDNAILELRNVLLKQLEKLLPPPIVLPEIRLEHLVETAITAQIDSC 188
Query: 636 VYHNSSNEISLYEDHCCGRDQIPTETLQILDSHEDEVWFVQFSNNGDYLASSSSDHTAII 815
+YHNS +SL+EDHCC RDQIPTET+QIL HE+EVWFVQFSNNG YLASSSSD TAII
Sbjct: 189 MYHNSQEAVSLFEDHCCKRDQIPTETVQILTEHENEVWFVQFSNNGHYLASSSSDCTAII 248
Query: 816 WKVSEEGILSLKHTLRSHQNPVSFVAWSPDDTMLLTCGNGEVLKLWDVETGTCKHTFGEK 995
W+V E+ L++K TLRSHQ PVSFVAWSPDDT LLTCGN EVLKLWDVETGTCKHTFG+
Sbjct: 249 WEVLEDDRLTIKRTLRSHQKPVSFVAWSPDDTKLLTCGNLEVLKLWDVETGTCKHTFGDH 308
Query: 996 SPIVSSCAWLPDSKRLVCGSSDPNKCIYMWDLDGNELEAWRGVRMPKVSDLAVTPDGEHL 1175
IVSSCAW PDSKR VCGSSDP K I MWD GNE++AWRG RMPKV DLAVTPDG HL
Sbjct: 309 GFIVSSCAWFPDSKRFVCGSSDPEKGICMWDCHGNEIKAWRGTRMPKVLDLAVTPDGVHL 368
Query: 1176 ISICSEKDIRIYSYRSKTERVVKEDHPITSLSVSKNSEFLIVNLNSQEIHLWEIVETGNK 1355
IS+ S+KDIRI++ + E+V+ E+HPITSLSVS +S+F IVNLNSQEIHLW++ K
Sbjct: 369 ISVFSDKDIRIFNLVTNAEQVISEEHPITSLSVSIDSKFFIVNLNSQEIHLWDVAGNWEK 428
Query: 1356 PLKYTGHKQGKYVIRSCFGGVDCMFIASGSENSQVYIWNRQNQKPLEVLTGHSMTVNCVS 1535
L+Y GHKQ KYVIRSCFGG++ FIASGSENSQVYIWNRQN +P+EVL+GH MTVNCVS
Sbjct: 429 ALRYMGHKQHKYVIRSCFGGLNSSFIASGSENSQVYIWNRQNSRPIEVLSGHLMTVNCVS 488
Query: 1536 WNPTQPQMLASASDDQTIRIWGPSRKK 1616
WNP + QMLASASDDQTIRIWGPS+ K
Sbjct: 489 WNPRRHQMLASASDDQTIRIWGPSQSK 515
>ref|XP_003554312.1| PREDICTED: WD repeat-containing protein 26-like [Glycine max]
Length = 523
Score = 579 bits (1493), Expect = e-163
Identities = 293/507 (57%), Positives = 362/507 (71%)
Frame = +3
Query: 96 INKTEFTRLIISYLYSLGYXXXXXXXXXXXXTPLNPPQLLSLETQILNNSSNFDTCIETI 275
I + EF R+II LYSLGY ++ LE+ ILN S +D I+ +
Sbjct: 14 IRRHEFVRIIIQCLYSLGYSSSASCLESESGISYKSNEVKLLESLILNGS--WDESIDYL 71
Query: 276 QNFDTLPEEVCSSALFLLFKHIFTEFLNTGDDLSALSILRKRISVLGVDKERVHKLASGI 455
+ E SALFL+F+ E+LN G+ AL +LRK++S L K +VH A +
Sbjct: 72 NSIKDELGETRESALFLVFRQCVMEYLNCGEYALALGVLRKQVSALDAGKCKVHSFAKCL 131
Query: 456 VFSGNEDMGSCCSSNEDXXXXXXXXXXXXXXXXFPPHVIVPDRRLECLVERAVLAQRDAC 635
+ + ++G+ + FPP + VP+ RLE LVE V++ D+C
Sbjct: 132 LSFKDRELGAV-DGGDVVVHDLRKKLLADLEKLFPPPISVPEGRLEHLVENTVMSWVDSC 190
Query: 636 VYHNSSNEISLYEDHCCGRDQIPTETLQILDSHEDEVWFVQFSNNGDYLASSSSDHTAII 815
+YH+SS+ ISLYEDH C RDQIPT T QIL H++EVWFVQFSNNG+YLASSS+D TAII
Sbjct: 191 MYHSSSSPISLYEDHHCSRDQIPTTTTQILTGHKNEVWFVQFSNNGEYLASSSNDCTAII 250
Query: 816 WKVSEEGILSLKHTLRSHQNPVSFVAWSPDDTMLLTCGNGEVLKLWDVETGTCKHTFGEK 995
WKV E+G L+LKHTL HQ+ VSFVAWSPDDT LLTCGN EVLKLWDVETGTCKHTFG +
Sbjct: 251 WKVLEDGKLTLKHTLYGHQHAVSFVAWSPDDTKLLTCGNTEVLKLWDVETGTCKHTFGNQ 310
Query: 996 SPIVSSCAWLPDSKRLVCGSSDPNKCIYMWDLDGNELEAWRGVRMPKVSDLAVTPDGEHL 1175
+VSSCAW P+SK+ VCGSSDP K + MWD DGN +++WRG+RMPKV DLAVTPDGE+L
Sbjct: 311 GFVVSSCAWFPNSKQFVCGSSDPEKGVCMWDCDGNVIKSWRGMRMPKVVDLAVTPDGEYL 370
Query: 1176 ISICSEKDIRIYSYRSKTERVVKEDHPITSLSVSKNSEFLIVNLNSQEIHLWEIVETGNK 1355
ISI +K+IRI + ERV+ E+HPITSLSVS +S+F IVNLNSQEIH+W++ +K
Sbjct: 371 ISIFMDKEIRILHMGTYAERVISEEHPITSLSVSGDSKFFIVNLNSQEIHMWDVAGKWDK 430
Query: 1356 PLKYTGHKQGKYVIRSCFGGVDCMFIASGSENSQVYIWNRQNQKPLEVLTGHSMTVNCVS 1535
PL++ GHKQ KYVIRSCFGG++ FIASGSENSQVYIWN +N +P+EVL+GHSMTVNCVS
Sbjct: 431 PLRFMGHKQHKYVIRSCFGGLNNTFIASGSENSQVYIWNCRNSRPVEVLSGHSMTVNCVS 490
Query: 1536 WNPTQPQMLASASDDQTIRIWGPSRKK 1616
WNP PQMLASASDD TIRIWGPS +K
Sbjct: 491 WNPKIPQMLASASDDYTIRIWGPSLQK 517
>ref|NP_199205.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
gi|9758551|dbj|BAB09052.1| WD-repeat protein-like
[Arabidopsis thaliana] gi|110742722|dbj|BAE99272.1|
WD-repeat protein-like [Arabidopsis thaliana]
gi|148535209|gb|ABQ85545.1| will die slowly [Arabidopsis
thaliana] gi|332007645|gb|AED95028.1| transducin/WD40
domain-containing protein [Arabidopsis thaliana]
Length = 523
Score = 577 bits (1488), Expect = e-162
Identities = 283/508 (55%), Positives = 365/508 (71%), Gaps = 3/508 (0%)
Frame = +3
Query: 96 INKTEFTRLIISYLYSLGYXXXXXXXXXXXXTPLNPPQLLSLETQILNNSSNFDTCIETI 275
+ K EF R+++ LYSLG+ LE Q+L S N+D+C++ +
Sbjct: 15 LKKHEFIRILVQCLYSLGFKNSASCLEFESKILYKTADSEFLEKQVL--SGNWDSCVQVL 72
Query: 276 QN-FDTLPEEVCSSALFLLFKHIFTEFLNTGDDLSALSILRKRISVLGVDKERVHKLASG 452
FD ++ ++AL+L+FK E+L GD AL++LRK+ +L + KE++H+LA
Sbjct: 73 DRIFDNSMDDTRNTALYLVFKQCLLEYLKRGDVSLALNVLRKQAPLLRMGKEKIHRLACD 132
Query: 453 IVFSGNEDMGSCCSSNEDXXXXXXXXXXXXXXXXFPPHVIVPDRRLECLVERAVLAQRDA 632
IV+S + G + P +++P+RRLE LVE AV+ Q D
Sbjct: 133 IVYSKEMESGEV---DNCLVLDLRRKLLVELEKLIPLPIVIPERRLEHLVETAVMDQIDT 189
Query: 633 CVYHNSSNEISLYEDHCCGRDQIPTETLQILDSHEDEVWFVQFSNNGDYLASSSSDHTAI 812
C+YHNS + +SLY+DHCCGRDQIP+ET+QIL +H++EVWFVQFSN+G YLA++SSD TAI
Sbjct: 190 CMYHNSCDAVSLYKDHCCGRDQIPSETVQILVAHKNEVWFVQFSNSGKYLATASSDCTAI 249
Query: 813 IWKVSEEGILSLKHTLRSHQNPVSFVAWSPDDTMLLTCGNGEVLKLWDVETGTCKHTFGE 992
IWKV ++ + LKHTL SHQNPVSFV+WSPDDT LLTCGN EVLKLWDV+TG +HTFG
Sbjct: 250 IWKVLDDNKVELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTGVLRHTFGN 309
Query: 993 KSP--IVSSCAWLPDSKRLVCGSSDPNKCIYMWDLDGNELEAWRGVRMPKVSDLAVTPDG 1166
+ VSSCAW PDS RLVCGSSDP + I MWD DGNE++AWRG R+PKV DLAVTPDG
Sbjct: 310 NNTGFTVSSCAWFPDSTRLVCGSSDPERGIVMWDTDGNEIKAWRGTRIPKVVDLAVTPDG 369
Query: 1167 EHLISICSEKDIRIYSYRSKTERVVKEDHPITSLSVSKNSEFLIVNLNSQEIHLWEIVET 1346
E +I++ S+K+IRI + +K ERV+ E+ PITSLS+S + +F IVNL+ QEIHLW++
Sbjct: 370 ESMITVFSDKEIRILNLETKVERVISEEQPITSLSISGDGKFFIVNLSCQEIHLWDLAGE 429
Query: 1347 GNKPLKYTGHKQGKYVIRSCFGGVDCMFIASGSENSQVYIWNRQNQKPLEVLTGHSMTVN 1526
+PLK++GH+Q KYVIRSCFGG+D FIASGSE+SQVYIWN +N KPLEVL+GHSMTVN
Sbjct: 430 WKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVN 489
Query: 1527 CVSWNPTQPQMLASASDDQTIRIWGPSR 1610
CVSWNP P+MLASASDDQTIRIWGP +
Sbjct: 490 CVSWNPKNPRMLASASDDQTIRIWGPGK 517
>ref|XP_002865396.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
gi|297311231|gb|EFH41655.1| transducin family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 523
Score = 572 bits (1475), Expect = e-160
Identities = 282/508 (55%), Positives = 364/508 (71%), Gaps = 3/508 (0%)
Frame = +3
Query: 96 INKTEFTRLIISYLYSLGYXXXXXXXXXXXXTPLNPPQLLSLETQILNNSSNFDTCIETI 275
+ K EF R+++ LYSLG+ SLE ++L S ++D+C+ +
Sbjct: 15 LKKHEFIRILVQCLYSLGFKNSASCLEIESNISCKSADYESLEKRVL--SGDWDSCVAVL 72
Query: 276 QN-FDTLPEEVCSSALFLLFKHIFTEFLNTGDDLSALSILRKRISVLGVDKERVHKLASG 452
FD ++ ++A++L+FK E+L GD AL++LRK+ +L + KE++H+LA
Sbjct: 73 DRIFDHSKDDTRNTAVYLVFKQCLLEYLKRGDVSLALNVLRKQAPMLRMGKEKIHRLACD 132
Query: 453 IVFSGNEDMGSCCSSNEDXXXXXXXXXXXXXXXXFPPHVIVPDRRLECLVERAVLAQRDA 632
IV+S + G S P +++P RRLE LVE AV+ Q D+
Sbjct: 133 IVYSKEMESGEVDSC---LVQGLRKKLLVELEKLIPLPIVIPKRRLEHLVETAVMDQIDS 189
Query: 633 CVYHNSSNEISLYEDHCCGRDQIPTETLQILDSHEDEVWFVQFSNNGDYLASSSSDHTAI 812
C+YHNS + +SLY+DHCCGRDQIP+ET+QIL +H++EVWFVQFSN+G YLA++SSD TAI
Sbjct: 190 CLYHNSWDAVSLYKDHCCGRDQIPSETVQILMAHKNEVWFVQFSNSGKYLATASSDCTAI 249
Query: 813 IWKVSEEGILSLKHTLRSHQNPVSFVAWSPDDTMLLTCGNGEVLKLWDVETGTCKHTFGE 992
IWKV ++ + LKHTL SHQNPVSFV+WSPDDT LLTCGN EVLKLWDV+TG +HTFG
Sbjct: 250 IWKVLDDSKVELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEVLKLWDVDTGVLRHTFGN 309
Query: 993 KSP--IVSSCAWLPDSKRLVCGSSDPNKCIYMWDLDGNELEAWRGVRMPKVSDLAVTPDG 1166
+ VSSCAW PDS RLVCGSSDP + I MWD DGNE++AWRG R+PKV DLAVTPDG
Sbjct: 310 NNTGFTVSSCAWFPDSTRLVCGSSDPERGIVMWDTDGNEIKAWRGTRIPKVVDLAVTPDG 369
Query: 1167 EHLISICSEKDIRIYSYRSKTERVVKEDHPITSLSVSKNSEFLIVNLNSQEIHLWEIVET 1346
E +I++ S+K+IRI + +K ERV+ E+ PITSLS+S + +F IVNL+ QEIHLW++
Sbjct: 370 ESMITVFSDKEIRILNLETKVERVIPEEQPITSLSISGDGKFFIVNLSCQEIHLWDLAGE 429
Query: 1347 GNKPLKYTGHKQGKYVIRSCFGGVDCMFIASGSENSQVYIWNRQNQKPLEVLTGHSMTVN 1526
PLK++GH+Q KYVIRSCFGG+D FIASGSE+SQVYIWN +N KPLEVL+GHSMTVN
Sbjct: 430 WKLPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDSQVYIWNLKNAKPLEVLSGHSMTVN 489
Query: 1527 CVSWNPTQPQMLASASDDQTIRIWGPSR 1610
CVSWNP P+MLASASDDQTIRIWGP +
Sbjct: 490 CVSWNPKNPRMLASASDDQTIRIWGPGK 517