BLASTX nr result

ID: Coptis24_contig00014655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014655
         (733 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19246.3| unnamed protein product [Vitis vinifera]               70   3e-10
emb|CAN78350.1| hypothetical protein VITISV_022837 [Vitis vinifera]    70   3e-10
ref|XP_002301088.1| predicted protein [Populus trichocarpa] gi|2...    67   5e-09
ref|NP_194189.6| Rho GTPase activation protein (RhoGAP) with PH ...    66   8e-09
ref|XP_002867658.1| predicted protein [Arabidopsis lyrata subsp....    66   8e-09

>emb|CBI19246.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 34/49 (69%), Positives = 42/49 (85%)
 Frame = +2

Query: 215 NYKKSGSKAEGAIATSSALSKLTTRLNFLKERRTQIVNELQNIESGADS 361
           N KKSG++ EG+ +T+SALSKLTTRLNFLKERRTQI NE+QN++ G  S
Sbjct: 780 NSKKSGTRNEGSNSTTSALSKLTTRLNFLKERRTQIANEIQNMDKGRSS 828


>emb|CAN78350.1| hypothetical protein VITISV_022837 [Vitis vinifera]
          Length = 276

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 34/49 (69%), Positives = 42/49 (85%)
 Frame = +2

Query: 215 NYKKSGSKAEGAIATSSALSKLTTRLNFLKERRTQIVNELQNIESGADS 361
           N KKSG++ EG+ +T+SALSKLTTRLNFLKERRTQI NE+QN++ G  S
Sbjct: 156 NSKKSGTRNEGSNSTTSALSKLTTRLNFLKERRTQIANEIQNMDKGRSS 204


>ref|XP_002301088.1| predicted protein [Populus trichocarpa] gi|222842814|gb|EEE80361.1|
           predicted protein [Populus trichocarpa]
          Length = 904

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 32/51 (62%), Positives = 43/51 (84%)
 Frame = +2

Query: 215 NYKKSGSKAEGAIATSSALSKLTTRLNFLKERRTQIVNELQNIESGADSCL 367
           N K+SG+++EG  +T+SAL++LTTRLNFLKERR+QI NELQN++ G  S L
Sbjct: 763 NSKRSGARSEGMNSTTSALTRLTTRLNFLKERRSQIANELQNMDKGRGSDL 813


>ref|NP_194189.6| Rho GTPase activation protein (RhoGAP) with PH domain [Arabidopsis
           thaliana] gi|332659528|gb|AEE84928.1| Rho GTPase
           activation protein (RhoGAP) with PH domain [Arabidopsis
           thaliana]
          Length = 933

 Score = 65.9 bits (159), Expect = 8e-09
 Identities = 31/44 (70%), Positives = 38/44 (86%)
 Frame = +2

Query: 221 KKSGSKAEGAIATSSALSKLTTRLNFLKERRTQIVNELQNIESG 352
           K+SG+K EG+  T+SALSKLT RLNFLKERR+QI NELQN++ G
Sbjct: 820 KRSGTKGEGSTTTTSALSKLTMRLNFLKERRSQIANELQNMDKG 863


>ref|XP_002867658.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313494|gb|EFH43917.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 925

 Score = 65.9 bits (159), Expect = 8e-09
 Identities = 31/44 (70%), Positives = 38/44 (86%)
 Frame = +2

Query: 221 KKSGSKAEGAIATSSALSKLTTRLNFLKERRTQIVNELQNIESG 352
           K+SG+K EG+  T+SALSKLT RLNFLKERR+QI NELQN++ G
Sbjct: 811 KRSGTKGEGSTTTTSALSKLTMRLNFLKERRSQIANELQNMDKG 854


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