BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014606
         (1533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g...   496   e-138
ref|XP_003546434.1| PREDICTED: KH domain-containing protein At4g...   462   e-127
ref|XP_003542958.1| PREDICTED: poly(rC)-binding protein 3-like [...   461   e-127
ref|XP_003549298.1| PREDICTED: poly(rC)-binding protein 3-like [...   460   e-127
ref|XP_002332094.1| predicted protein [Populus trichocarpa] gi|2...   457   e-126

>ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g18375 isoform 1 [Vitis
            vinifera]
          Length = 466

 Score =  496 bits (1276), Expect = e-138
 Identities = 259/379 (68%), Positives = 307/379 (81%), Gaps = 3/379 (0%)
 Frame = -2

Query: 1532 TPSSSSSAEKRWPGWPGDSVFRLVVPVLKVGSIIGRKGELIKKMCEETRARIRILDGVLG 1353
            T + + ++EK+WPGWPGD VFRL+VPVLKVGSIIGRKGELIKKMCEETRARIR+LDG +G
Sbjct: 60   TEAPAPASEKKWPGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVG 119

Query: 1352 TLDRVVLISGKEEPEAQISPAMNAVLRVFKRINGLXXXXXXXXXXXXXA---CSIRLLVA 1182
            T DR+VLISG+EEPEA +SPAM+AV+RVFKR+ GL                 CSIRLLVA
Sbjct: 120  TSDRIVLISGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDGKAYGAAGVAFCSIRLLVA 179

Query: 1181 SSQAINLIGKQGSQIKAIQESSGASVRVLSGDEVPHYATSDERVVEIQGESLKVLKALEA 1002
            S+QAINLIGKQGS IK+IQES+GASVRVLSGDEVP YA +DER+VE+QGE+LKV KALEA
Sbjct: 180  STQAINLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIVELQGEALKVQKALEA 239

Query: 1001 VIGHLRKFLVDHSIIPLFEKVNNPTVSQERPAETWADKAQSLVQTASQVTSQAGITSDYP 822
            V+GHLRKFLVDHS++PLFE+  N T+SQ+R ++TWADK  SL+      TSQ G+ SDY 
Sbjct: 240  VVGHLRKFLVDHSVLPLFERTYNATISQDRQSDTWADK--SLLHG----TSQTGMGSDYS 293

Query: 821  LSIKRDSLFLDRDTQLESQMHHSSLSLYGQDPGFPGLRTSGLSRASAAIISQITQTMQIP 642
            L  KR+SL+LDR+TQ+E    HS L +YGQ+ G  G+R+SGL RA A I++QI QTMQIP
Sbjct: 294  LPAKRESLYLDRETQME----HSGLPMYGQEHGLSGIRSSGLGRAGAPIVTQIAQTMQIP 349

Query: 641  LAYAEDXXXXXXXXXXXIRRTSGAILTVQESRGLPDEITVEIKGTTSQVQTAQQLIQDFL 462
            L+YAED           IRRTSGAILTVQESRGLPDEITVEIKGT+SQVQTAQQLIQ+F+
Sbjct: 350  LSYAEDIIGIGGANIAYIRRTSGAILTVQESRGLPDEITVEIKGTSSQVQTAQQLIQEFI 409

Query: 461  AGHKDPVSSSYGKMDTGLR 405
            + HK+PV SSYGKMD+GLR
Sbjct: 410  SNHKEPVPSSYGKMDSGLR 428


>ref|XP_003546434.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
          Length = 442

 Score =  462 bits (1188), Expect = e-127
 Identities = 244/376 (64%), Positives = 296/376 (78%), Gaps = 2/376 (0%)
 Frame = -2

Query: 1526 SSSSSAEKRWPGWPGDSVFRLVVPVLKVGSIIGRKGELIKKMCEETRARIRILDGVLGTL 1347
            ++S+  EKRWPGWPGD VFRL+VPV KVGSIIGRKGELIKKMCEETR+RIR+LD  LGT 
Sbjct: 36   AASTPPEKRWPGWPGDCVFRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTP 95

Query: 1346 DRVVLISGKEEPEAQISPAMNAVLRVFKRINGLXXXXXXXXXXXXXA--CSIRLLVASSQ 1173
            DR+VL+SGKEEPEA +SPAM+AV+R+FKR++GL                CSIRLLVAS+Q
Sbjct: 96   DRIVLVSGKEEPEAALSPAMDAVVRIFKRVSGLSETDAENKESAAGLAFCSIRLLVASTQ 155

Query: 1172 AINLIGKQGSQIKAIQESSGASVRVLSGDEVPHYATSDERVVEIQGESLKVLKALEAVIG 993
            AINLIGKQGS IK+IQE++ ASVRVLSGDEV  YAT DER+VEIQGE+LKVLKALEAV+G
Sbjct: 156  AINLIGKQGSLIKSIQENTSASVRVLSGDEVQSYATVDERIVEIQGEALKVLKALEAVVG 215

Query: 992  HLRKFLVDHSIIPLFEKVNNPTVSQERPAETWADKAQSLVQTASQVTSQAGITSDYPLSI 813
            HLRKFLVDHS++PLFEK  N + SQ+R AETW+DK  SL+ T    TS+  I +D P S 
Sbjct: 216  HLRKFLVDHSVLPLFEKTYNASTSQDRQAETWSDK--SLLHT----TSRTSIFADIPYST 269

Query: 812  KRDSLFLDRDTQLESQMHHSSLSLYGQDPGFPGLRTSGLSRASAAIISQITQTMQIPLAY 633
            KRDS+  DR++QL+S +  S++SLYGQD    G+R+S L R  A I++ + QTMQIPL+Y
Sbjct: 270  KRDSVLADRESQLDSFLPSSTMSLYGQDSSLSGVRSSALGRVGAPIVTTVIQTMQIPLSY 329

Query: 632  AEDXXXXXXXXXXXIRRTSGAILTVQESRGLPDEITVEIKGTTSQVQTAQQLIQDFLAGH 453
            AED           IRRTSGAILTVQESR +PDEI VEIKGT+S+VQTAQQLIQD ++ H
Sbjct: 330  AEDIIGIQGTNIEYIRRTSGAILTVQESR-VPDEIVVEIKGTSSEVQTAQQLIQDVISSH 388

Query: 452  KDPVSSSYGKMDTGLR 405
            K+P++SSYG++D G R
Sbjct: 389  KEPITSSYGRLDAGPR 404


>ref|XP_003542958.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
          Length = 436

 Score =  461 bits (1187), Expect = e-127
 Identities = 243/377 (64%), Positives = 296/377 (78%), Gaps = 2/377 (0%)
 Frame = -2

Query: 1529 PSSSSSAEKRWPGWPGDSVFRLVVPVLKVGSIIGRKGELIKKMCEETRARIRILDGVLGT 1350
            P   ++AEKRWPGWPG  VFRL+VPVLKVGSIIGRKGELIKK CEET+ARIR+LDG +GT
Sbjct: 29   PPPDAAAEKRWPGWPGHCVFRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGT 88

Query: 1349 LDRVVLISGKEEPEAQISPAMNAVLRVFKRINGLXXXXXXXXXXXXXACSIRLLVASSQA 1170
             DR+VLISGKE+ EA +SPAM+AV+RVFKR++G               CS+RLLVAS+QA
Sbjct: 89   SDRIVLISGKEDLEAPLSPAMDAVIRVFKRVSGFSEIDAKNKASAVAFCSVRLLVASTQA 148

Query: 1169 INLIGKQGSQIKAIQESSGASVRVLSGDEVPHYATSDERVVEIQGESLKVLKALEAVIGH 990
            INLIGKQGS IK+IQE++GASVRVLSGDEVP YA +DER+VE+QGE++KVLKALEAV+GH
Sbjct: 149  INLIGKQGSLIKSIQENTGASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGH 208

Query: 989  LRKFLVDHSIIPLFEKVNNPTVSQERPAE-TWADKAQSLVQTASQVTSQAGITSDYPLSI 813
            LRKFLVD+S++PLFEK  N T+SQER A+ TW DK       +    SQ  I +D PLS 
Sbjct: 209  LRKFLVDNSVLPLFEKTYNATISQERQADTTWVDK------PSLHSASQPSIVTDIPLST 262

Query: 812  KRDSLFLDRDTQLESQMHHSSLSLYGQDPGFPGLRTSGLSRASA-AIISQITQTMQIPLA 636
            KRDSLF DR++QL+S +  S++S+YGQD    GLR+S LSR SA  I++ + QTMQIPL+
Sbjct: 263  KRDSLFADRESQLDSLLPPSTMSMYGQDSSLSGLRSSALSRPSAPPIVTTVIQTMQIPLS 322

Query: 635  YAEDXXXXXXXXXXXIRRTSGAILTVQESRGLPDEITVEIKGTTSQVQTAQQLIQDFLAG 456
            YAED           IRRTSGAILTVQESR +PDEI VEIKGT+SQVQTAQQLIQ+ ++ 
Sbjct: 323  YAEDIIGIQGTNIEYIRRTSGAILTVQESR-VPDEIIVEIKGTSSQVQTAQQLIQEVISN 381

Query: 455  HKDPVSSSYGKMDTGLR 405
            H +PV+S+Y ++DTGLR
Sbjct: 382  HTEPVASNYSRLDTGLR 398


>ref|XP_003549298.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
          Length = 436

 Score =  460 bits (1183), Expect = e-127
 Identities = 242/373 (64%), Positives = 294/373 (78%), Gaps = 2/373 (0%)
 Frame = -2

Query: 1517 SSAEKRWPGWPGDSVFRLVVPVLKVGSIIGRKGELIKKMCEETRARIRILDGVLGTLDRV 1338
            ++AEKRWPGWPG  VFRL+VPVLKVGSIIGRKGELIKK CEET+ARIR+LDG +GT DR+
Sbjct: 33   AAAEKRWPGWPGHCVFRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRI 92

Query: 1337 VLISGKEEPEAQISPAMNAVLRVFKRINGLXXXXXXXXXXXXXACSIRLLVASSQAINLI 1158
            VLISGKEEPEA +SPAMNAV+RVFKR++G               CS+RLLVAS+QAINLI
Sbjct: 93   VLISGKEEPEAPLSPAMNAVIRVFKRVSGFSEIDAENKASAVAFCSVRLLVASTQAINLI 152

Query: 1157 GKQGSQIKAIQESSGASVRVLSGDEVPHYATSDERVVEIQGESLKVLKALEAVIGHLRKF 978
            GKQGS IK+IQE++GASVRVLSGDEVP YA +DER+VE+QGE++KVLKALEAV+GHLRKF
Sbjct: 153  GKQGSLIKSIQENTGASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGHLRKF 212

Query: 977  LVDHSIIPLFEKVNNPTVSQERPAE-TWADKAQSLVQTASQVTSQAGITSDYPLSIKRDS 801
            LVD+S++PLFEK  N T+SQE  A+ TW DK       +    SQ  I +D PLS KRDS
Sbjct: 213  LVDNSVLPLFEKTYNATISQEHQADTTWVDK------PSLHSASQPSIVTDLPLSTKRDS 266

Query: 800  LFLDRDTQLESQMHHSSLSLYGQDPGFPGLRTSGLSRASA-AIISQITQTMQIPLAYAED 624
            LF DR++QL+S +  S++S+YGQD    GLR+S LSR SA  I++ + QTMQIPL+YAED
Sbjct: 267  LFADRESQLDSLLPPSTMSIYGQDSSLSGLRSSALSRPSAPPIVTTVIQTMQIPLSYAED 326

Query: 623  XXXXXXXXXXXIRRTSGAILTVQESRGLPDEITVEIKGTTSQVQTAQQLIQDFLAGHKDP 444
                       IR TSGAILTVQES  +PDEI VEIKGT+SQVQTAQQLIQ+ ++ HK+P
Sbjct: 327  IIGIQGTNIEYIRCTSGAILTVQES-PVPDEIIVEIKGTSSQVQTAQQLIQEVISNHKEP 385

Query: 443  VSSSYGKMDTGLR 405
            ++S+Y ++DTGLR
Sbjct: 386  LASNYSRLDTGLR 398


>ref|XP_002332094.1| predicted protein [Populus trichocarpa] gi|222874914|gb|EEF12045.1|
            predicted protein [Populus trichocarpa]
          Length = 460

 Score =  457 bits (1176), Expect = e-126
 Identities = 239/377 (63%), Positives = 291/377 (77%), Gaps = 7/377 (1%)
 Frame = -2

Query: 1517 SSAEKRWPGWPGDSVFRLVVPVLKVGSIIGRKGELIKKMCEETRARIRILDGVLGTLDRV 1338
            S ++ +WPGWPGD+VFRL+VPV KVGSIIGRKGEL+KKMC+ETRARIRIL+G LG  DR+
Sbjct: 40   SQSQDKWPGWPGDNVFRLIVPVSKVGSIIGRKGELVKKMCDETRARIRILEGPLGITDRI 99

Query: 1337 VLISGKEEPEAQISPAMNAVLRVFKRINGLXXXXXXXXXXXXXA-------CSIRLLVAS 1179
            VLISGKEEPEA +SPAM+AVLRVFKR++GL             A       CSIRLLVAS
Sbjct: 100  VLISGKEEPEAPLSPAMDAVLRVFKRVSGLSPGEGDNTGSAAAAAAAGSAFCSIRLLVAS 159

Query: 1178 SQAINLIGKQGSQIKAIQESSGASVRVLSGDEVPHYATSDERVVEIQGESLKVLKALEAV 999
            SQAINLIGKQGS IK+IQE++G  VRV++ D++P YATSDER+VEI GE++KV KALEAV
Sbjct: 160  SQAINLIGKQGSIIKSIQENTGVVVRVMAEDDIPTYATSDERIVEIHGEAMKVFKALEAV 219

Query: 998  IGHLRKFLVDHSIIPLFEKVNNPTVSQERPAETWADKAQSLVQTASQVTSQAGITSDYPL 819
            IGHLRKFLVDHS+IP+FEK  N T+S ERPA+  AD AQ  + +A   +S  GI SDY L
Sbjct: 220  IGHLRKFLVDHSVIPIFEKTYNATISLERPADACADNAQPSLHSAPAFSS--GIISDYSL 277

Query: 818  SIKRDSLFLDRDTQLESQMHHSSLSLYGQDPGFPGLRTSGLSRASAAIISQITQTMQIPL 639
            S+KRD    + +T  E ++     SLYG DPG  GLR++GL RA+A I++Q+TQTMQ+PL
Sbjct: 278  SLKRDPSIYEHETHFEHKISQPGFSLYG-DPGLVGLRSTGLGRATAPIVTQVTQTMQVPL 336

Query: 638  AYAEDXXXXXXXXXXXIRRTSGAILTVQESRGLPDEITVEIKGTTSQVQTAQQLIQDFLA 459
            +YAED           IRRTSGAIL++QESRGLPDEITVEIKGT+SQVQ AQQLIQ+F++
Sbjct: 337  SYAEDIIGVAGSNIAYIRRTSGAILSIQESRGLPDEITVEIKGTSSQVQMAQQLIQEFIS 396

Query: 458  GHKDPVSSSYGKMDTGL 408
             HK+P  + YGK+D GL
Sbjct: 397  NHKEPTPNMYGKIDVGL 413