BLASTX nr result

ID: Coptis24_contig00014587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014587
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535971.1| PREDICTED: uncharacterized protein all1601-l...   224   7e-57
ref|XP_002315601.1| predicted protein [Populus trichocarpa] gi|2...   223   1e-56
ref|XP_002518190.1| Coenzyme F420 hydrogenase subunit beta, puta...   222   2e-56
ref|XP_002285592.1| PREDICTED: uncharacterized protein all1601 [...   221   6e-56
emb|CAN75143.1| hypothetical protein VITISV_038427 [Vitis vinifera]   219   1e-55

>ref|XP_003535971.1| PREDICTED: uncharacterized protein all1601-like [Glycine max]
          Length = 452

 Score =  224 bits (570), Expect = 7e-57
 Identities = 104/121 (85%), Positives = 114/121 (94%)
 Frame = -2

Query: 363 PAKDHCSKCGLCDTYYIAHVKNACAFLGDGMSRIERLEPVVHGRGRKVGSLDETYFGVHE 184
           PAKDHCS+CGLCDTYYIAHVKNACAFLGDGMS+IERLEPVVHGRGRK  +LDETY GV+E
Sbjct: 47  PAKDHCSRCGLCDTYYIAHVKNACAFLGDGMSKIERLEPVVHGRGRKTDNLDETYLGVYE 106

Query: 183 ELLYARKTSPVKGAQWTGIITTIAIEMLKADMVDAVICVQSDPEDRFTPMPVLARTPEEV 4
           ELLYARK +PV+GAQWTGI+TTIAIEMLK+ MV+AVICVQSDP+DRF P PVLARTPEEV
Sbjct: 107 ELLYARKLNPVEGAQWTGIVTTIAIEMLKSGMVEAVICVQSDPDDRFAPRPVLARTPEEV 166

Query: 3   L 1
           L
Sbjct: 167 L 167


>ref|XP_002315601.1| predicted protein [Populus trichocarpa] gi|222864641|gb|EEF01772.1|
           predicted protein [Populus trichocarpa]
          Length = 456

 Score =  223 bits (569), Expect = 1e-56
 Identities = 103/121 (85%), Positives = 113/121 (93%)
 Frame = -2

Query: 363 PAKDHCSKCGLCDTYYIAHVKNACAFLGDGMSRIERLEPVVHGRGRKVGSLDETYFGVHE 184
           PAKDHCS+CGLCDTYY+AHVKNACAFLGDGMS+IE LEPVVHGRGRK  S DE YFGVHE
Sbjct: 51  PAKDHCSQCGLCDTYYVAHVKNACAFLGDGMSKIEGLEPVVHGRGRKADSFDEAYFGVHE 110

Query: 183 ELLYARKTSPVKGAQWTGIITTIAIEMLKADMVDAVICVQSDPEDRFTPMPVLARTPEEV 4
           ELLYARKT PV+GAQWTGI+T+IAIEMLK+ MV+AVICVQSDPEDRF+P PVLARTP+EV
Sbjct: 111 ELLYARKTKPVEGAQWTGIVTSIAIEMLKSGMVEAVICVQSDPEDRFSPRPVLARTPDEV 170

Query: 3   L 1
           L
Sbjct: 171 L 171


>ref|XP_002518190.1| Coenzyme F420 hydrogenase subunit beta, putative [Ricinus communis]
           gi|223542786|gb|EEF44323.1| Coenzyme F420 hydrogenase
           subunit beta, putative [Ricinus communis]
          Length = 458

 Score =  222 bits (566), Expect = 2e-56
 Identities = 104/121 (85%), Positives = 112/121 (92%)
 Frame = -2

Query: 363 PAKDHCSKCGLCDTYYIAHVKNACAFLGDGMSRIERLEPVVHGRGRKVGSLDETYFGVHE 184
           PAKDHCS+CGLCDTYYI+HV+NACAFLGDGMSRIE LE VVHGRGRK+ S DE Y GVHE
Sbjct: 53  PAKDHCSRCGLCDTYYISHVRNACAFLGDGMSRIEGLEAVVHGRGRKIDSSDEMYLGVHE 112

Query: 183 ELLYARKTSPVKGAQWTGIITTIAIEMLKADMVDAVICVQSDPEDRFTPMPVLARTPEEV 4
           ELLYARKT PV+GAQWTGI+TTIAIEMLKADMVDAVICVQSDPEDR +P PVLARTP+EV
Sbjct: 113 ELLYARKTKPVEGAQWTGIVTTIAIEMLKADMVDAVICVQSDPEDRLSPRPVLARTPQEV 172

Query: 3   L 1
           L
Sbjct: 173 L 173


>ref|XP_002285592.1| PREDICTED: uncharacterized protein all1601 [Vitis vinifera]
           gi|297741879|emb|CBI33314.3| unnamed protein product
           [Vitis vinifera]
          Length = 457

 Score =  221 bits (562), Expect = 6e-56
 Identities = 103/121 (85%), Positives = 113/121 (93%)
 Frame = -2

Query: 363 PAKDHCSKCGLCDTYYIAHVKNACAFLGDGMSRIERLEPVVHGRGRKVGSLDETYFGVHE 184
           PAKDHCS+CGLCDTYYIAHVKNACAFLGDGMS+IE LEP+VHGRGRK  SLDETY GV+E
Sbjct: 52  PAKDHCSRCGLCDTYYIAHVKNACAFLGDGMSKIESLEPLVHGRGRKAYSLDETYLGVYE 111

Query: 183 ELLYARKTSPVKGAQWTGIITTIAIEMLKADMVDAVICVQSDPEDRFTPMPVLARTPEEV 4
           +LLYARKT PV+GAQWTGI+TTIAIEMLKA MV+AVICVQSDPEDR +P PVLARTP+EV
Sbjct: 112 QLLYARKTEPVEGAQWTGIVTTIAIEMLKAGMVEAVICVQSDPEDRLSPRPVLARTPDEV 171

Query: 3   L 1
           L
Sbjct: 172 L 172


>emb|CAN75143.1| hypothetical protein VITISV_038427 [Vitis vinifera]
          Length = 240

 Score =  219 bits (559), Expect = 1e-55
 Identities = 103/121 (85%), Positives = 113/121 (93%)
 Frame = -2

Query: 363 PAKDHCSKCGLCDTYYIAHVKNACAFLGDGMSRIERLEPVVHGRGRKVGSLDETYFGVHE 184
           PAKDHCS+CGLCDTYYIAHVKNACAFLGDGMS+IE LEP+VHGRGRK  SLDETY GV+E
Sbjct: 52  PAKDHCSRCGLCDTYYIAHVKNACAFLGDGMSKIESLEPLVHGRGRKDYSLDETYLGVYE 111

Query: 183 ELLYARKTSPVKGAQWTGIITTIAIEMLKADMVDAVICVQSDPEDRFTPMPVLARTPEEV 4
           +LLYARKT PV+GAQWTGI+TTIAIEMLKA MV+AVICVQSDPEDR +P PVLARTP+EV
Sbjct: 112 QLLYARKTEPVEGAQWTGIVTTIAIEMLKAGMVEAVICVQSDPEDRLSPRPVLARTPDEV 171

Query: 3   L 1
           L
Sbjct: 172 L 172


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