BLASTX nr result

ID: Coptis24_contig00014541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014541
         (1547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531810.1| conserved hypothetical protein [Ricinus comm...   315   2e-83
ref|XP_002326273.1| predicted protein [Populus trichocarpa] gi|2...   311   2e-82
ref|XP_002265929.1| PREDICTED: uncharacterized protein LOC100251...   305   2e-80
ref|XP_002323687.1| predicted protein [Populus trichocarpa] gi|2...   291   4e-76
dbj|BAJ88046.1| predicted protein [Hordeum vulgare subsp. vulgare]    279   2e-72

>ref|XP_002531810.1| conserved hypothetical protein [Ricinus communis]
            gi|223528544|gb|EEF30567.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 318

 Score =  315 bits (807), Expect = 2e-83
 Identities = 169/307 (55%), Positives = 202/307 (65%), Gaps = 1/307 (0%)
 Frame = +3

Query: 612  IWLIEVRAQSPPGTSGVAGRSLDVLLQDYAYRAFDRPRVKTGDVYNGTVPSNLTGIRISA 791
            +WL  +RAQ P      + R+LD LLQDYAY+A    R KTG +Y+G VPS+L+GI+ISA
Sbjct: 17   LWLPGLRAQPPN-----SARALDALLQDYAYQALVLVRPKTGTIYDGVVPSDLSGIKISA 71

Query: 792  MRLRSGSFYSRGV-RYWEFEIPNAVVVRPYVQRLVLVYQNLGNLSLSYYPLSGYTYLTPV 968
            +RLRSGS   +GV  Y EF+I   V+ +PYV+RLVLVYQNLGN SL YYPLS YTYL PV
Sbjct: 72   LRLRSGSLRRKGVDMYKEFKIHPGVIEQPYVERLVLVYQNLGNWSLRYYPLSNYTYLAPV 131

Query: 969  VGVLAYDAINLSAVNLPELNLSARGRPILINFSLVESVPDGLSAQCVWIDFNGLPQFTQP 1148
            +G+LAY A NLSA NLPEL++ A G PI I F  V+S PDGL A+CVW D  G P F+  
Sbjct: 132  LGLLAYSASNLSATNLPELDIRATGDPITIRFPDVKSAPDGLVAKCVWFDLQGSPSFSNV 191

Query: 1149 VSSNVCSTLNQGHFAIVAEQTALSPAPVSPSPTGEVPNVPTGGTRNEGNKSKXXXXXXXX 1328
             S N CST+ QGHF+IV E  A SP P SP P+G  PNVP    + + + SK        
Sbjct: 192  ASGNECSTVQQGHFSIVVESIAPSPEPASPPPSGGAPNVPGPTGQEKKSNSKVGIIVGSV 251

Query: 1329 XXXXXXXXXXXXXXXXXQRYKSRKKMHQMEKAAEVGEALHMASVGNTRAPVAMGTRTQPV 1508
                             Q+ K +KKM QME+AAEVGEAL M SVG T+AP AM TRTQP 
Sbjct: 252  LGGILLLVLLSFLVFWVQKLKEKKKMQQMERAAEVGEALQMTSVGETKAPAAMVTRTQPT 311

Query: 1509 LENEYVP 1529
            LENEYVP
Sbjct: 312  LENEYVP 318


>ref|XP_002326273.1| predicted protein [Populus trichocarpa] gi|222833466|gb|EEE71943.1|
            predicted protein [Populus trichocarpa]
          Length = 316

 Score =  311 bits (798), Expect = 2e-82
 Identities = 174/310 (56%), Positives = 205/310 (66%), Gaps = 4/310 (1%)
 Frame = +3

Query: 612  IWLIEVRAQSPPGTSGVAGRSLDVLLQDYAYRAFDRPRVKTGDVYNGTVPSNLTGIRISA 791
            +WL    AQS       + R+LD LLQDYAY AF  PR  TG  Y+G VPSNLTGI+I+A
Sbjct: 17   LWLPRFNAQSTN-----SARALDALLQDYAYSAFVLPR--TGIPYDGIVPSNLTGIKIAA 69

Query: 792  MRLRSGSFYSRGVR-YWEFEIPNAVVVRPYVQRLVLVYQNLGNLSLSYYPLSGYTYLTPV 968
            MRLRSGS  SRGVR Y EF IP  VVV+PYV+R+VLVYQNLGN S  YYPL GYTY+ PV
Sbjct: 70   MRLRSGSLKSRGVRMYKEFGIPEGVVVQPYVERVVLVYQNLGNWSRRYYPLPGYTYIAPV 129

Query: 969  VGVLAYDAINLSAVNLPELNLSARGRPILINFSLVESVPDGLSAQCVWIDFNGLPQFTQP 1148
            +G+LAYDA NLSA NLPEL++ A G P+ I+F  V S PDG  A+CVW D +G P  +  
Sbjct: 130  LGLLAYDASNLSATNLPELDIMASGNPLNISFLNVRSAPDGSIAKCVWFDLHGFPSLSNV 189

Query: 1149 VSSNVCSTLNQGHFAIVAEQTALSPAPVSPSPTGEVPNV---PTGGTRNEGNKSKXXXXX 1319
             S NVCST+ QGHF+IV E  A SPAPVSP+P+   PNV   P+GG + + N  K     
Sbjct: 190  TSGNVCSTIQQGHFSIVVESLAPSPAPVSPTPS--PPNVGPGPSGGGKKK-NSKKVWPII 246

Query: 1320 XXXXXXXXXXXXXXXXXXXXQRYKSRKKMHQMEKAAEVGEALHMASVGNTRAPVAMGTRT 1499
                                Q+ K RKK+ QME+AAEVGE+L M  VG T+AP AM TRT
Sbjct: 247  GSVLGGLLLLVLLSFLILWAQKLKQRKKVQQMERAAEVGESLQMTMVGETKAPAAMVTRT 306

Query: 1500 QPVLENEYVP 1529
            QP LENEYVP
Sbjct: 307  QPTLENEYVP 316


>ref|XP_002265929.1| PREDICTED: uncharacterized protein LOC100251898 [Vitis vinifera]
          Length = 314

 Score =  305 bits (782), Expect = 2e-80
 Identities = 171/307 (55%), Positives = 201/307 (65%), Gaps = 2/307 (0%)
 Frame = +3

Query: 615  WLIEVRAQSPPGTSGVAGRSLDVLLQDYAYRAFDR-PRVKTGDVYNGTVPSNLTGIRISA 791
            WL +V AQS       + R+LD LLQDYAY+AF    + KTG  Y+G VP NLTGI ISA
Sbjct: 20   WLSDVGAQSTG-----SARALDALLQDYAYQAFKALNKPKTGIPYDGAVPLNLTGIGISA 74

Query: 792  MRLRSGSFYSRGVR-YWEFEIPNAVVVRPYVQRLVLVYQNLGNLSLSYYPLSGYTYLTPV 968
            +RLRSGS  SRGV  Y EFEIP  VVV PYV+RL+ VYQNLGNLS  YYPL GY YL PV
Sbjct: 75   LRLRSGSLRSRGVTMYKEFEIPKGVVVTPYVERLIFVYQNLGNLSSVYYPLPGYAYLAPV 134

Query: 969  VGVLAYDAINLSAVNLPELNLSARGRPILINFSLVESVPDGLSAQCVWIDFNGLPQFTQP 1148
            +G+L YDA NLSA NLPEL+++A  +PI I F  V SVP G  A+CVW D +G P F+  
Sbjct: 135  LGLLPYDASNLSATNLPELHINASDKPISIKFQGVSSVPAGSVAKCVWFDLDGFPNFSNA 194

Query: 1149 VSSNVCSTLNQGHFAIVAEQTALSPAPVSPSPTGEVPNVPTGGTRNEGNKSKXXXXXXXX 1328
            VS N+CST  QGHF IV E  A +P+P    P   VP+ P+GG   +G  SK        
Sbjct: 195  VSGNICSTAQQGHFGIVVESNAPAPSP----PPSVVPS-PSGG--EKGGTSKVWIIVGSV 247

Query: 1329 XXXXXXXXXXXXXXXXXQRYKSRKKMHQMEKAAEVGEALHMASVGNTRAPVAMGTRTQPV 1508
                             ++YK RKKM QMEKAAEVGEAL M SVGNT+AP AM TRTQP+
Sbjct: 248  VGGLALLVLLAFLVLWLRKYKRRKKMQQMEKAAEVGEALRMTSVGNTKAPAAMVTRTQPI 307

Query: 1509 LENEYVP 1529
            +ENEY+P
Sbjct: 308  IENEYMP 314


>ref|XP_002323687.1| predicted protein [Populus trichocarpa] gi|222868317|gb|EEF05448.1|
            predicted protein [Populus trichocarpa]
          Length = 305

 Score =  291 bits (744), Expect = 4e-76
 Identities = 168/306 (54%), Positives = 195/306 (63%), Gaps = 2/306 (0%)
 Frame = +3

Query: 612  IWLIEVRAQSPPGTSGVAGRSLDVLLQDYAYRAFDRPRVKTGDVYNGTVPSNLTGIRISA 791
            +WL  + AQS       + R LD LLQDYAYRAF RPR  TG  Y+GTVPSNLTGI+I+A
Sbjct: 9    VWLPGIIAQSIN-----SARPLDALLQDYAYRAFVRPR--TGIAYDGTVPSNLTGIKIAA 61

Query: 792  MRLRSGSFYSRGVR-YWEFEIPNAVVVRPYVQRLVLVYQNLGNLSLSYYPLSGYTYLTPV 968
            MRLRSGS   +GV+ Y EF IP  VVV  YV+RLVLVYQNLGN SL+YYPL GY YL PV
Sbjct: 62   MRLRSGSLRRKGVKMYKEFGIPEGVVVLQYVERLVLVYQNLGNWSLTYYPLPGYAYLAPV 121

Query: 969  VGVLAYDAINLSAVNLPELNLSARGRPILINFSLVESVPDGLSAQCVWIDFNGLPQFTQP 1148
            +G++AY A NLSA NL EL++   G P+ I F  V+S P G  A+CV  D  G P F+  
Sbjct: 122  LGLIAYSASNLSATNLRELDIRVSGDPLNITFPDVQSPPVGSIAKCVGFDLQGRPTFSNV 181

Query: 1149 VSSNVCSTLNQGHFAIVAEQTALSPAPVSPSPTGEVPNV-PTGGTRNEGNKSKXXXXXXX 1325
             S NVC T  QGHF+IVAE  A SP PVSP+P+   PNV P    R + N  K       
Sbjct: 182  SSGNVCLTTQQGHFSIVAESPAPSPTPVSPTPS--PPNVGPVPSGRGKKNSKKVGIIVGS 239

Query: 1326 XXXXXXXXXXXXXXXXXXQRYKSRKKMHQMEKAAEVGEALHMASVGNTRAPVAMGTRTQP 1505
                              Q+ K RKKM QME+AAEVGE+L M SVG T+AP AM TRTQP
Sbjct: 240  VLGGLLLLVFLSFFVLWAQKLKQRKKMQQMERAAEVGESLQMTSVGETKAPAAMVTRTQP 299

Query: 1506 VLENEY 1523
             LENEY
Sbjct: 300  TLENEY 305


>dbj|BAJ88046.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 402

 Score =  279 bits (713), Expect = 2e-72
 Identities = 154/303 (50%), Positives = 198/303 (65%), Gaps = 3/303 (0%)
 Frame = +3

Query: 627  VRAQSPPGTSGVAGRSLDVLLQDYAYRAFDRPRVKTGDVYNGTVPSNLTGIRISAMRLRS 806
            V AQSP        R+LD +LQ+YAYRAF RP   TG VYNGTVPS+L G+ +S +RLRS
Sbjct: 110  VAAQSPS-----PARALDAMLQEYAYRAFVRPH--TGIVYNGTVPSDLAGVAVSGLRLRS 162

Query: 807  GSFYSRGV-RYWEFEIPNAVVVRPYVQRLVLVYQNLGNLSLSYYPLSGYTYLTPVVGVLA 983
            GS   +G   Y+ F IP  V+V+PYV+R+VLVY +LG+LS  YYPL GYTYL+P++G+L 
Sbjct: 163  GSLRRKGFSNYFNFRIPPGVIVQPYVERVVLVYHSLGDLSEKYYPLPGYTYLSPILGLLV 222

Query: 984  YDAINLSAVNLPELNLSARGRPILINFSLVESVPDGLSA-QCVWIDFNGLPQFTQPVSSN 1160
            YDA NLSAV L EL++ A G PI +NFS V +VP G  A QCVW D +G+PQF    ++N
Sbjct: 223  YDAANLSAVGLSELSIVASGSPISVNFSNVRAVPPGSPAPQCVWFDLDGVPQFRALEANN 282

Query: 1161 VCSTLNQGHFAIVAEQTALSPAPVSPSPTGEV-PNVPTGGTRNEGNKSKXXXXXXXXXXX 1337
            VC+T  +GHF+IV   + ++PA   P P+G + P +PT G R++G+ S            
Sbjct: 283  VCATYRRGHFSIVVNSSEVAPA---PGPSGAIAPPIPTDGGRDKGS-SDAWKIAVGVVGG 338

Query: 1338 XXXXXXXXXXXXXXQRYKSRKKMHQMEKAAEVGEALHMASVGNTRAPVAMGTRTQPVLEN 1517
                           RYK  KKM  ME+ AEVGE L MA VG T+APVA GTRT+PV+E+
Sbjct: 339  VIALGLLALLLVCFLRYKKEKKMEVMERNAEVGETLRMAQVGRTQAPVAFGTRTKPVIES 398

Query: 1518 EYV 1526
            EYV
Sbjct: 399  EYV 401


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