BLASTX nr result
ID: Coptis24_contig00014515
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00014515
(2177 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002527264.1| ribonuclease, putative [Ricinus communis] gi... 592 e-166
ref|XP_002326981.1| predicted protein [Populus trichocarpa] gi|2... 547 e-153
ref|XP_003532241.1| PREDICTED: poly(A)-specific ribonuclease PAR... 522 e-145
ref|XP_004148964.1| PREDICTED: poly(A)-specific ribonuclease PAR... 519 e-144
ref|XP_002321239.1| predicted protein [Populus trichocarpa] gi|2... 518 e-144
>ref|XP_002527264.1| ribonuclease, putative [Ricinus communis] gi|223533357|gb|EEF35108.1|
ribonuclease, putative [Ricinus communis]
Length = 624
Score = 592 bits (1525), Expect = e-166
Identities = 301/545 (55%), Positives = 392/545 (71%), Gaps = 3/545 (0%)
Frame = +2
Query: 2 IAYLKNKHAAEKFQIFQFMVCPFSLKSSKLVAYPYNFHLFPRDELNIGMPSYSFSCQTSY 181
+AYLK+KHAAEKFQI Q VCPF++ +SK+ AYPYNFHLFPRDELN GMPSYSFSC TSY
Sbjct: 82 VAYLKSKHAAEKFQILQLAVCPFTVSASKVTAYPYNFHLFPRDELNSGMPSYSFSCHTSY 141
Query: 182 LTSMARQGFDFNMCIHDGISYLSRVQESAVKQQLENPVSDVYKVKSSLTSSVSDVMFMDR 361
LT M ++GFDFN C++DGISYLSR QESA + +++NP V+S+ T V+D +F+ R
Sbjct: 142 LTKMVQEGFDFNACVNDGISYLSRAQESAARVRMKNPFLAKDIVESTSTPGVADSVFVQR 201
Query: 362 IKSRIQHWKKACKEQSKDTDDALVRSIRKLILGGEVYGSRPCLTIDVCNERQVQLVLEML 541
+SR+++WK AC + S TD+ALV+S+RKL+LG E Y SRPC+ IDVC+ERQV LV+EML
Sbjct: 202 TRSRVKNWKNACTDTSS-TDEALVKSLRKLVLGLEEYNSRPCINIDVCSERQVHLVIEML 260
Query: 542 NKCFDDLVPLVIPEKGGGSKGVRAVLTRSEEDKNLFKXXXXXXXXXQNKKVRGFREVIDV 721
+ DDLVPL++P KGGG++ VR VLT S+ED++L + QNKK+RGFREVID+
Sbjct: 261 QEFADDLVPLIVPAKGGGTQAVRVVLTSSKEDRDLLQMELQNLEDEQNKKIRGFREVIDL 320
Query: 722 ISASQKPIVAYNCLEEFSFIHSKFIASLPPSMNEFMCSLRLVFPQILDITHLLKEIGPLK 901
IS S+KP+V++N L + +FIHSKF+A LPPSM EF CSLRLVFPQ++D+ HL+KEI PLK
Sbjct: 321 ISGSEKPVVSHNSLNDLAFIHSKFLAPLPPSMEEFTCSLRLVFPQVIDVNHLMKEISPLK 380
Query: 902 KASNIYAAISNLKRQFFVPLDIEIPHQVQGHENKNYGHNVLFTAYLFAKLSSLLKITPDA 1081
K +NI A S LK FF P+D+EIP +E K +GHNV+ LFAKL +LK+ P++
Sbjct: 381 KVTNIPMATSYLKNWFFAPVDMEIPFPAMVNEGKIHGHNVMRICQLFAKLCYILKLAPNS 440
Query: 1082 QESSSDHQAISINRYANNFSPCSANLQEPTNED-DIWVNSTMKVSSRDLILLWGFSSGMP 1258
+S+ + A +I Y N FSP QEPT+ED IW N+T KVS +DL+ LWGF M
Sbjct: 441 IQSNEKNLASAIEAYVNIFSPYFPGPQEPTDEDVRIWTNNTRKVSCQDLVFLWGFRYRMS 500
Query: 1259 ARELKSLLHGTHDVFLEDFELRLLDKSCAVVVFKKPHAAEEFLKVIGSGGVGYDALRDLI 1438
A LKSLL +H VF E+F++R +DKSCA+VVF +P + L V+ LR+++
Sbjct: 501 AGMLKSLLQQSHKVFSEEFDVRFVDKSCAIVVFWEPGLSNTLLDVLKGSSEIVGPLREMV 560
Query: 1439 SEGLRAAEYKAYKRVCASAILETNLADSLDKTLAEQTDDILISDS-KKAADVYWSSEFII 1615
SEG+RAA Y Y RVC + NLADSLDK LA+ TD SDS +++ YW E++I
Sbjct: 561 SEGVRAASYDTYNRVCRLGLWHENLADSLDKALAD-TDHPSDSDSVTSSSNTYWCHEWMI 619
Query: 1616 -LDEL 1627
LDEL
Sbjct: 620 NLDEL 624
>ref|XP_002326981.1| predicted protein [Populus trichocarpa] gi|222835296|gb|EEE73731.1|
predicted protein [Populus trichocarpa]
Length = 626
Score = 547 bits (1410), Expect = e-153
Identities = 285/547 (52%), Positives = 377/547 (68%), Gaps = 6/547 (1%)
Frame = +2
Query: 5 AYLKNKHAAEKFQIFQFMVCPFSLKSSKLVAYPYNFHLFPRDELNIGMPSYSFSCQTSYL 184
AYLK K+AAE+FQ+ F VCP ++++SK+ AYPYNFHLFPR EL + MPSYSF CQTS L
Sbjct: 81 AYLKAKYAAERFQVLHFAVCPITVRASKVTAYPYNFHLFPRAELKMEMPSYSFYCQTSSL 140
Query: 185 TSMARQGFDFNMCIHDGISYLSRVQESAVKQQLENPVSDVYKVKSSLTSSVSDVMFMDRI 364
SMARQGFDFN CI+DGISYLSR QES K Q+ NP+ +S+ T SV+D +F++RI
Sbjct: 141 ISMARQGFDFNSCINDGISYLSREQESTAKIQMGNPILAKNVTESTSTLSVADSVFVERI 200
Query: 365 KSRIQHWKKACKEQS-----KDTDDALVRSIRKLILGGEVYGSRPCLTIDVCNERQVQLV 529
KS I++WKKACKE S DALVRS+RKL+LG E Y SRPC+ IDVC+ERQ QLV
Sbjct: 201 KSHIKNWKKACKETSTRKEGNQIQDALVRSLRKLVLGNEEYDSRPCMNIDVCSERQAQLV 260
Query: 530 LEMLNKCFDDLVPLVIPEKGGGSKGVRAVLTRSEEDKNLFKXXXXXXXXXQNKKVRGFRE 709
+EML + DD+VPL+IP KGG + VR VLT S+EDK+L + KKVRGFRE
Sbjct: 261 VEMLQEFADDVVPLIIPAKGGAMQAVRVVLTSSKEDKDLLQGKLQNDEQELKKKVRGFRE 320
Query: 710 VIDVISASQKPIVAYNCLEEFSFIHSKFIASLPPSMNEFMCSLRLVFPQILDITHLLKEI 889
VID+ISASQKP+V++ L + + IHSKFIA LPP+++EFMCSLRL FP ++D+ HL+KEI
Sbjct: 321 VIDLISASQKPVVSHGSLNDLTVIHSKFIAPLPPTVDEFMCSLRLAFPLVIDVNHLMKEI 380
Query: 890 GPLKKASNIYAAISNLKRQFFVPLDIEIPHQVQGHENKNYGHNVLFTAYLFAKLSSLLKI 1069
PL+K ++I AIS LK +FF P+D+EIP Q +E+ +G NV+ LFA+L S+LKI
Sbjct: 381 SPLRKVTSIPVAISQLKNRFFTPIDMEIPCQAMENEDTIHGQNVVKICELFARLCSILKI 440
Query: 1070 TPDAQESSSDHQAISINRYANNFSP-CSANLQEPTNEDDIWVNSTMKVSSRDLILLWGFS 1246
P A +S + A ++ YAN FSP C+A+ + E IW N+T VS D++ LWGF
Sbjct: 441 DPAAVKSDEEKGASALEAYANIFSPFCTASEEPIDGEIKIWTNNTRTVSCEDMVFLWGFG 500
Query: 1247 SGMPARELKSLLHGTHDVFLEDFELRLLDKSCAVVVFKKPHAAEEFLKVIGSGGVGYDAL 1426
+ A LKSLL +H+ F ++F++RL+D SCA+V+F + E FL + L
Sbjct: 501 DRVTAGILKSLLQESHEAFSKEFDVRLVDNSCAIVIFWQHGLTETFLNTMNKCSDMRGPL 560
Query: 1427 RDLISEGLRAAEYKAYKRVCASAILETNLADSLDKTLAEQTDDILISDSKKAADVYWSSE 1606
R+++SEGLRAA Y+ Y R C + E++LADSLD+ LA+ +D +DSK +
Sbjct: 561 REMVSEGLRAAGYETYNRACRLGLWESSLADSLDRALAD-SDCASEADSKTKCSDRCNEW 619
Query: 1607 FIILDEL 1627
I LD+L
Sbjct: 620 IINLDDL 626
>ref|XP_003532241.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Glycine max]
Length = 619
Score = 522 bits (1344), Expect = e-145
Identities = 259/547 (47%), Positives = 382/547 (69%), Gaps = 6/547 (1%)
Frame = +2
Query: 5 AYLKNKHAAEKFQIFQFMVCPFSL-KSSKLVAYPYNFHLFPRDELNIGMPSYSFSCQTSY 181
AY K + AA++FQ+ F VCPFS+ +S KL+A+PYNF LFPRDE+ +GMP+YSFSCQTS
Sbjct: 74 AYSKARRAAQRFQLLHFAVCPFSVSRSDKLLAHPYNFMLFPRDEMKMGMPTYSFSCQTSL 133
Query: 182 LTSMARQGFDFNMCIHDGISYLSRVQESAVKQQLENPVSDVYKVKSSLTSSVSDVMFMDR 361
L SMARQGFDFN C+++GISYLSR QESA + +L + + +KSS S+V+D +F++R
Sbjct: 134 LASMARQGFDFNACVYNGISYLSRAQESAARIRLGTALPSLRVMKSSSPSTVADTVFVER 193
Query: 362 IKSRIQHWKKACK--EQSKDTDDALVRSIRKLILGGEVYGSRPCLTIDVCNERQVQLVLE 535
I+S++++W+++CK + +K D+ LV S+R ++LG E + SRPC+T+DVC+ERQVQL+LE
Sbjct: 194 IRSKVKYWRESCKSSDTNKSRDEELVNSLRNIVLGNEQFRSRPCMTVDVCSERQVQLILE 253
Query: 536 MLNKCFDDLVPLVIPEKGGGSKGVRAVLTRSEEDKNLFKXXXXXXXXXQNKKVRGFREVI 715
M+ DDL+PL IP K G VR VL S+EDK+L + ++KK+RGFREVI
Sbjct: 254 MVLDYSDDLLPLPIPTKSGTIHAVRIVLANSKEDKDLLERELRNLEEEESKKIRGFREVI 313
Query: 716 DVISASQKPIVAYNCLEEFSFIHSKFIASLPPSMNEFMCSLRLVFPQILDITHLLKEIGP 895
D+ISASQKP++++NCL + + IHSKFIA LPP ++EF+ SL VFP++LDI +L+K+ G
Sbjct: 314 DLISASQKPVISHNCLNDCTLIHSKFIAPLPPEIDEFVSSLCSVFPEVLDINYLMKKHGT 373
Query: 896 LKKASNIYAAISNLKRQFFVPLDIEIPHQVQGHENKNYGHNVLFTAYLFAKLSSLLKITP 1075
++K +NI +AIS L FF P+D+EIP Q E K +G L +YLF KL S+LKI+P
Sbjct: 374 MRKVTNIPSAISYLNNHFFAPVDLEIPDQATVKEGKIHGLTALRLSYLFMKLCSILKISP 433
Query: 1076 DAQESSSDHQAISINRYANNFSPCSANLQEPTNEDDI--WVNSTMKVSSRDLILLWGFSS 1249
+ ES + H A + + N F P S +Q+ N D+ W N+T KVS L+ LWGF
Sbjct: 434 NVTESGNKHLAPELEDFTNVFHPFSTPIQDSFNGGDVGMWTNNTKKVSCEHLVFLWGFKI 493
Query: 1250 GMPARELKSLLHGTHDVFLEDFELRLLDKSCAVVVFKKPHAAEEFLKVIGSGGVGYDALR 1429
G+ A LKSLL +HD+F +F+++L+DKSCA+VVF + ++ FL ++ S + D L+
Sbjct: 494 GITAGMLKSLLRSSHDIFSREFDVKLVDKSCAIVVFWQSGVSKRFLDILNSEEIRGD-LK 552
Query: 1430 DLISEGLRAAEYKAYKRVCASAILETNLADSLDKTLAEQTDDILISDSKKAADVYWSSEF 1609
+L+S+G+R Y+ Y +C + E +LA+SL++ L DI + +K+++++W ++
Sbjct: 553 ELVSDGMRVTSYETYNTICRLGLWEMDLAESLERALESSCCDIESNCERKSSEIHWYNDN 612
Query: 1610 II-LDEL 1627
+I LD+L
Sbjct: 613 VINLDDL 619
>ref|XP_004148964.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Cucumis sativus]
Length = 610
Score = 519 bits (1336), Expect = e-144
Identities = 272/544 (50%), Positives = 374/544 (68%), Gaps = 3/544 (0%)
Frame = +2
Query: 5 AYLKNKHAAEKFQIFQFMVCPFSLKSSKLVAYPYNFHLFPRDELNIGMPSYSFSCQTSYL 184
AY K K+AAEKFQI QF +CPFS++ SKL+A+PYNFHLFPRDELNIGMPSYSFSCQ S+L
Sbjct: 74 AYCKAKYAAEKFQIIQFSLCPFSVRDSKLIAHPYNFHLFPRDELNIGMPSYSFSCQVSHL 133
Query: 185 TSMARQGFDFNMCIHDGISYLSRVQESAVKQQLENPV--SDVYKVKSSLTSSVSDVMFMD 358
TSMAR+GFDF ++DGISYLSR QES K Q+ + ++ VK S SV+D +F+
Sbjct: 134 TSMAREGFDFGAWVYDGISYLSRAQESIAKTQMGSQTLPPNINAVKPSSELSVADTIFVQ 193
Query: 359 RIKSRIQHWKKACKEQSKDTDDALVRSIRKLILGGEVYGSRPCLTIDVCNERQVQLVLEM 538
R+KSR+++WK A SK T DAL+ +++KLI+G E YGSRP + IDV +ERQV LVLE+
Sbjct: 194 RVKSRVKNWKDAYDSSSK-TSDALLSTLKKLIVGSEQYGSRPSIVIDVYSERQVLLVLEL 252
Query: 539 LNKCFDDLVPLVIPEKGGGSKGVRAVLTRSEEDKNLFKXXXXXXXXXQNKKVRGFREVID 718
L + DDLVP+VI KGGG++ VRA+LT S+EDK L + +NKK RGFREVID
Sbjct: 253 LKEFSDDLVPVVISAKGGGTQAVRAILTSSKEDKILLEKELQYLEDKENKKFRGFREVID 312
Query: 719 VISASQKPIVAYNCLEEFSFIHSKFIASLPPSMNEFMCSLRLVFPQILDITHLLKEIGPL 898
VISASQKPIV+YN L +F+FIHSKF+A LP S++E+ SL VFP++ D+ HL+ +IG L
Sbjct: 313 VISASQKPIVSYNSLHDFTFIHSKFLAPLPTSIDEYASSLHSVFPRVHDVKHLMSKIGGL 372
Query: 899 KKASNIYAAISNLKRQFFVPLDIEIPHQVQGHENKNYGHNVLFTAYLFAKLSSLLKITPD 1078
K +I AA S LK+Q++ P ++IP + G+++K +GHN + +LFA++ S+LKI
Sbjct: 373 SKPMSIAAAYSYLKKQYYAPSYLDIPVEAPGNDHKPHGHNAIRLCHLFAQVCSVLKIDLS 432
Query: 1079 AQESSSDHQAISINRYANNFSPCSANLQEPTNED-DIWVNSTMKVSSRDLILLWGFSSGM 1255
+S+ + S+ +N S S +P +ED IW KVS R L+ LWG G+
Sbjct: 433 GVQSNDNECLASMLDECSNVSSFSPYHCKPKDEDVKIWAQGVRKVSCRHLVFLWGLREGL 492
Query: 1256 PARELKSLLHGTHDVFLEDFELRLLDKSCAVVVFKKPHAAEEFLKVIGSGGVGYDALRDL 1435
AR LK+ L GTH+VF E+F++R +DK CA+VVF +P +E FL I S + +LR++
Sbjct: 493 TARLLKASLEGTHEVFCEEFDVRFVDKKCAIVVFSQPDLSETFLDAINSDNI-VGSLREM 551
Query: 1436 ISEGLRAAEYKAYKRVCASAILETNLADSLDKTLAEQTDDILISDSKKAADVYWSSEFII 1615
+SEGLRAA Y+ YK++C+ + E +LA+SL++ + E + D Y + FI
Sbjct: 552 VSEGLRAAGYETYKKICSFDLWEADLAESLERAILEADPETAQLDIN-----YSNDSFIY 606
Query: 1616 LDEL 1627
L++L
Sbjct: 607 LNDL 610
>ref|XP_002321239.1| predicted protein [Populus trichocarpa] gi|222862012|gb|EEE99554.1|
predicted protein [Populus trichocarpa]
Length = 628
Score = 518 bits (1333), Expect = e-144
Identities = 272/549 (49%), Positives = 372/549 (67%), Gaps = 8/549 (1%)
Frame = +2
Query: 5 AYLKNKHAAEKFQIFQFMVCPFSLKSSKLVAYPYNFHLFPRDELNIGMPSYSFSCQTSYL 184
AYLK K+AAE+FQ+ F VCPF++++SK+ AYPYNFHLFPR EL + MPSYSF CQTS L
Sbjct: 81 AYLKAKYAAERFQVLHFAVCPFTVRASKVTAYPYNFHLFPRAELKMEMPSYSFYCQTSSL 140
Query: 185 TSMARQGFDFNMCIHDGISYLSRVQESAVKQQLENPVSDVYKVKSSLTSSVSDVMFMDRI 364
SMARQGFDFN CI+DGISYLSR QESA K Q+ NP+ +S+ T SV+D +F++RI
Sbjct: 141 ISMARQGFDFNSCINDGISYLSREQESAAKIQMGNPILAKNVTESTSTLSVADSVFVERI 200
Query: 365 KSRIQHWKKACKEQS-----KDTDDALVRSIRKLILGGEVYGSRPCLTIDVCNERQVQLV 529
KS I++WKKACKE S DALVRS+RKL+LG E Y SRPC+ IDVC+ERQ QLV
Sbjct: 201 KSHIKNWKKACKETSTRKEGNQIQDALVRSLRKLVLGNEEYDSRPCMNIDVCSERQAQLV 260
Query: 530 LEMLNKCFDDLVPLVIPEKGGGSKGVRAVLTRSEEDKNLFKXXXXXXXXXQNKK-VRGFR 706
+EML + DD+VPL+IP KGG + VR VLT S+EDK+L + + +G
Sbjct: 261 VEMLQEFADDVVPLIIPAKGGAMQAVRVVLTSSKEDKDLLQENTVISFTREGSPGTKGKS 320
Query: 707 EVIDVISA-SQKPIVAYNCLEEFSFIHSKFIASLPPSMNEFMCSLRLVFPQILDITHLLK 883
++++++ + KP+V++ L + + IHSKFIA LPP+++EFMCSLRL FP ++D+ HL+K
Sbjct: 321 LIVNLVAEYNLKPVVSHGSLNDLTVIHSKFIAPLPPTVDEFMCSLRLAFPLVIDVNHLMK 380
Query: 884 EIGPLKKASNIYAAISNLKRQFFVPLDIEIPHQVQGHENKNYGHNVLFTAYLFAKLSSLL 1063
EI PL+K ++I AIS LK +FF P+D+EIP Q +E+ +G NV+ LFA+L S+L
Sbjct: 381 EISPLRKVTSIPVAISQLKNRFFTPIDMEIPCQAMENEDTIHGQNVVKICELFARLCSIL 440
Query: 1064 KITPDAQESSSDHQAISINRYANNFSP-CSANLQEPTNEDDIWVNSTMKVSSRDLILLWG 1240
KI P A +S + A ++ YAN FSP C+A+ + E IW N+T VS D++ LWG
Sbjct: 441 KIDPAAVKSDEEKGASALEAYANIFSPFCTASEEPIDGEIKIWTNNTRTVSCEDMVFLWG 500
Query: 1241 FSSGMPARELKSLLHGTHDVFLEDFELRLLDKSCAVVVFKKPHAAEEFLKVIGSGGVGYD 1420
F + A LKSLL +H+ F ++F++RL+D SCA+V+F + E FL +
Sbjct: 501 FGDRVTAGILKSLLQESHEAFSKEFDVRLVDNSCAIVIFWQHGLTETFLNTMNKCSDMRG 560
Query: 1421 ALRDLISEGLRAAEYKAYKRVCASAILETNLADSLDKTLAEQTDDILISDSKKAADVYWS 1600
LR+++SEGLRAA Y+ Y R C + E++LADSLD+ LA+ +D +DSK +
Sbjct: 561 PLREMVSEGLRAAGYETYNRACRLGLWESSLADSLDRALAD-SDCASEADSKTKCSDRCN 619
Query: 1601 SEFIILDEL 1627
I LD+L
Sbjct: 620 EWIINLDDL 628