BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014491
         (784 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ40868.1| transcriptional factor MYB-3 [Coptis japonica]        111   2e-22
ref|XP_002271980.1| PREDICTED: transcription factor MYB1R1 isofo...   103   3e-20
emb|CAN73090.1| hypothetical protein VITISV_028723 [Vitis vinife...   102   1e-19
ref|XP_002511478.1| DNA binding protein, putative [Ricinus commu...   100   5e-19
gb|AAO45179.1| transcription factor Myb1 [Malus xiaojinensis]          97   3e-18

>dbj|BAJ40868.1| transcriptional factor MYB-3 [Coptis japonica]
          Length = 255

 Score =  111 bits (278), Expect = 2e-22
 Identities = 76/186 (40%), Positives = 99/186 (53%), Gaps = 13/186 (6%)
 Frame = -1

Query: 784 GKGDWRGISRNYVKTRTPTQVASHAQKYFLXXXXXXXXXXXXSLFDIT----------AE 635
           GKGDWRGISRN+VKTRTPTQVASHAQKYFL            SLFDIT           +
Sbjct: 75  GKGDWRGISRNFVKTRTPTQVASHAQKYFLRKNNQNRRRRRSSLFDITTDTYMVDEESVQ 134

Query: 634 EERPIQSPQQLNSNFGLSLPIFSLSFGP---ENTTLGQAEPTNTHAKVXXXXXXXXXXPS 464
           +E   QSPQ+++ N G S+    +   P       + Q++     A +           +
Sbjct: 135 QEPTPQSPQEMSCNLGFSMSTNPVPISPVLFSENHMEQSDFIAIPANIVRPIPVIPTPQA 194

Query: 463 SRMEDLNLNQNTMVEDSSSLSLKLCTPEXXXXXXXXXSRHSAFQAMSNFSSSGDLDPNGG 284
           SRM DL+LNQ   + D S+LSL+L             SRHSAFQAM + S+  ++D   G
Sbjct: 195 SRMVDLDLNQKCTM-DPSALSLQLSN----SFEKQTSSRHSAFQAMLSLSTGNNVDCGSG 249

Query: 283 SIISVA 266
           ++ISVA
Sbjct: 250 NMISVA 255


>ref|XP_002271980.1| PREDICTED: transcription factor MYB1R1 isoform 2 [Vitis vinifera]
          Length = 288

 Score =  103 bits (258), Expect = 3e-20
 Identities = 85/192 (44%), Positives = 102/192 (53%), Gaps = 19/192 (9%)
 Frame = -1

Query: 784 GKGDWRGISRNYVKTRTPTQVASHAQKYFLXXXXXXXXXXXXSLFDITA---------EE 632
           GKGDWRGISRN+VKTRTPTQVASHAQKYFL            SLFDITA         EE
Sbjct: 104 GKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNHNRRRRRSSLFDITADTFMGSTILEE 163

Query: 631 ERPIQ---SPQQLNSNF-----GLSLPIFSLSFGPENTTLGQAEPTNTHAKVXXXXXXXX 476
           ++  Q   SP QL+S+      G  +P F ++  P   TLGQ+       K+        
Sbjct: 164 DQVHQETVSPPQLHSHLNGSAGGFPVPTFPVTMAP-ILTLGQSNQAKGPTKLIRPIPILP 222

Query: 475 XXPSSRMEDLNLNQNTMVEDSSSLSLKLCTPEXXXXXXXXXSRH-SAFQAMS-NFSSSGD 302
             PSS+M DLNLN  +   D   LSLK  +           +RH SAFQAMS +F+SS  
Sbjct: 223 VPPSSKMADLNLNIPS-TADPLPLSLKPSSSTSTSPQSPTATRHSSAFQAMSESFNSS-- 279

Query: 301 LDPNGGSIISVA 266
               G +IISVA
Sbjct: 280 ---TGDNIISVA 288


>emb|CAN73090.1| hypothetical protein VITISV_028723 [Vitis vinifera]
           gi|296086475|emb|CBI32064.3| unnamed protein product
           [Vitis vinifera]
          Length = 300

 Score =  102 bits (253), Expect = 1e-19
 Identities = 86/203 (42%), Positives = 103/203 (50%), Gaps = 30/203 (14%)
 Frame = -1

Query: 784 GKGDWRGISRNYVKTRTPTQVASHAQKYFLXXXXXXXXXXXXSLFDITA---------EE 632
           GKGDWRGISRN+VKTRTPTQVASHAQKYFL            SLFDITA         EE
Sbjct: 104 GKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNHNRRRRRSSLFDITADTFMGSTILEE 163

Query: 631 ERPIQ---SPQQLNSNF-----GLSLPIFSLSFGP-----------ENTTLGQAEPTNTH 509
           ++  Q   SP QL+S+      G  +P F ++  P           E  TLGQ+      
Sbjct: 164 DQVHQETVSPPQLHSHLNGSAGGFPVPTFPVTMAPVVLPVASNGSMEILTLGQSNQAKGP 223

Query: 508 AKVXXXXXXXXXXPSSRMEDLNLNQNTMVEDSSSLSLKLCTPEXXXXXXXXXSRH-SAFQ 332
            K+          PSS+M DLNLN  +   D   LSLK  +           +RH SAFQ
Sbjct: 224 TKLIRPIPILPVPPSSKMADLNLNIPS-TADPLPLSLKPSSSTSTSPQSPTATRHSSAFQ 282

Query: 331 AMS-NFSSSGDLDPNGGSIISVA 266
           AMS +F+SS      G +IISVA
Sbjct: 283 AMSESFNSS-----TGDNIISVA 300


>ref|XP_002511478.1| DNA binding protein, putative [Ricinus communis]
           gi|223550593|gb|EEF52080.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 319

 Score =  100 bits (248), Expect = 5e-19
 Identities = 79/206 (38%), Positives = 100/206 (48%), Gaps = 33/206 (16%)
 Frame = -1

Query: 784 GKGDWRGISRNYVKTRTPTQVASHAQKYFLXXXXXXXXXXXXSLFDITA--------EEE 629
           GKGDWRGISRN+VKTRTPTQVASHAQKYFL            SLFDIT         EEE
Sbjct: 125 GKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDTVTAFPMEEE 184

Query: 628 R-------------PIQSPQQLNSNFG-LSLPIFSLSFGP-----------ENTTLGQAE 524
           +             P+  P    SNF  +S+P FS++  P           +N +L QA 
Sbjct: 185 QARRQDNSSSPQSHPLPPPLPETSNFSVMSMPAFSMTSSPVVLPIPIETPMQNLSLLQA- 243

Query: 523 PTNTHAKVXXXXXXXXXXPSSRMEDLNLNQNTMVEDSSSLSLKLCTPEXXXXXXXXXSRH 344
             N+   +          P+S + D+NLN     + S +LSLKL  P          +R+
Sbjct: 244 --NSSTTLIRPIAVIPAPPTSGISDINLNLKASTDSSPNLSLKLSLPS-DQRESPSSTRY 300

Query: 343 SAFQAMSNFSSSGDLDPNGGSIISVA 266
           SAFQ M +F+       NG  II+VA
Sbjct: 301 SAFQVMPSFN-------NGDGIITVA 319


>gb|AAO45179.1| transcription factor Myb1 [Malus xiaojinensis]
          Length = 302

 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 81/209 (38%), Positives = 98/209 (46%), Gaps = 36/209 (17%)
 Frame = -1

Query: 784 GKGDWRGISRNYVKTRTPTQVASHAQKYFLXXXXXXXXXXXXSLFDITA--------EEE 629
           GKGDWRGISRN+VKTRTPTQVASHAQKY+L            SLFDIT         +EE
Sbjct: 107 GKGDWRGISRNFVKTRTPTQVASHAQKYYLRRSNLNRRRRRSSLFDITTDTVAPTPMDEE 166

Query: 628 R---------------PIQSPQQLNSNFGLSL-PIFSLSFGP-----------ENTTLGQ 530
           +               P   P +     G S+ P F+ + GP           EN  L Q
Sbjct: 167 QVQHQDNISQSQLHPLPPPPPSEPRDAGGFSMVPNFARTVGPAVLPVHIENPMENLALRQ 226

Query: 529 AEPTN-THAKVXXXXXXXXXXPSSRMEDLNLNQNTMVEDSSSLSLKLCTPEXXXXXXXXX 353
           A P N T AK+           ++ + DLNLN  T   D+S+L+L L             
Sbjct: 227 ANPENSTSAKLVHPVALHSAPHATAISDLNLNSTT---DASTLTLNL---SLSMDSREPS 280

Query: 352 SRHSAFQAMSNFSSSGDLDPNGGSIISVA 266
           SRHSAF+ M  FS       NG S+ISVA
Sbjct: 281 SRHSAFETMQGFS-------NGDSMISVA 302