BLASTX nr result

ID: Coptis24_contig00014471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014471
         (1305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK92591.1| unknown [Populus trichocarpa]                          522   e-146
ref|XP_002322412.1| predicted protein [Populus trichocarpa] gi|2...   520   e-145
ref|XP_002264723.2| PREDICTED: uncharacterized protein LOC100266...   520   e-145
ref|XP_004148130.1| PREDICTED: uncharacterized protein LOC101209...   510   e-142
ref|NP_199968.1| protein EXORDIUM like 3 [Arabidopsis thaliana] ...   507   e-141

>gb|ABK92591.1| unknown [Populus trichocarpa]
          Length = 342

 Score =  522 bits (1344), Expect = e-146
 Identities = 244/319 (76%), Positives = 273/319 (85%)
 Frame = -3

Query: 1120 TPVLGSTIWPHHNINNTDLVFGASKKFEGSSDFVHLRYHMGPVLTSNITVHLIWYGAWQK 941
            TP+     WPH   N++DL++ +SKKFEGSS+FVHLRYHMGPVLT NITVH IWYG W+K
Sbjct: 24   TPITCWRPWPHLKPNSSDLLYDSSKKFEGSSEFVHLRYHMGPVLTGNITVHTIWYGRWEK 83

Query: 940  SQKKIIRGFLNSISAVDSKHPSVSSWWKTVQLYTDQTGANISRHVNVGDEKNDRFYSHGK 761
            SQKKIIR F+NSIS V+++ PSVS WW+TVQLYTDQTGANIS  V +G EKNDRFYSHGK
Sbjct: 84   SQKKIIREFINSISTVNARPPSVSGWWRTVQLYTDQTGANISHTVQLGQEKNDRFYSHGK 143

Query: 760  SLTRLSIQSVIKSAVTTRTHPLPINPKSGLYLLLTSDDVHVENFCGQVCGFHYFTFPSIV 581
            SLTRLSIQSVIKSAVT ++ PLP NPK+GLYLLLTSDDV+V++FCGQVCGFHYFTFPSIV
Sbjct: 144  SLTRLSIQSVIKSAVTAKSKPLPTNPKNGLYLLLTSDDVYVQDFCGQVCGFHYFTFPSIV 203

Query: 580  GYTLPYAWVGNSAKQCPGFCAYPFAVPNYIPGLKPVKSPNNDAGVDGMISVIAHELAELA 401
            GYTLPYAWVGNS K CPG CAYPF+VP YIPGLK +KSPN D GVDGMISVIAHE+AELA
Sbjct: 204  GYTLPYAWVGNSEKLCPGVCAYPFSVPKYIPGLKALKSPNGDVGVDGMISVIAHEIAELA 263

Query: 400  TNPLVNAWYAGQDPSFPTEIADLCEXXXXXXXXXXXXGQLMEDHDGATYNMNGMRRRFLV 221
            TNPLVNAWYAGQDPSFP EIADLCE            GQ++ DHDGATYNMNG+RR+FLV
Sbjct: 264  TNPLVNAWYAGQDPSFPVEIADLCEGIYGTGGGGSYTGQMLLDHDGATYNMNGIRRKFLV 323

Query: 220  QWVWNPVVNYCSGPNALDQ 164
            QWVWN  V+YC+GPNALDQ
Sbjct: 324  QWVWNHFVSYCTGPNALDQ 342


>ref|XP_002322412.1| predicted protein [Populus trichocarpa] gi|222869408|gb|EEF06539.1|
            predicted protein [Populus trichocarpa]
          Length = 309

 Score =  520 bits (1340), Expect = e-145
 Identities = 242/309 (78%), Positives = 271/309 (87%)
 Frame = -3

Query: 1093 PHHNINNTDLVFGASKKFEGSSDFVHLRYHMGPVLTSNITVHLIWYGAWQKSQKKIIRGF 914
            PH N N++DL++ +SKKFEGSS+FVHLRYHMGPVLT NITVH IWYG WQKSQKKIIRGF
Sbjct: 1    PHLNPNSSDLLYDSSKKFEGSSEFVHLRYHMGPVLTGNITVHTIWYGRWQKSQKKIIRGF 60

Query: 913  LNSISAVDSKHPSVSSWWKTVQLYTDQTGANISRHVNVGDEKNDRFYSHGKSLTRLSIQS 734
            +NSIS V ++HPSV+ WW+TVQLYTDQTGANIS  V +G EKNDRFYSHGKSLTRLSIQS
Sbjct: 61   INSISDVHARHPSVAGWWRTVQLYTDQTGANISHTVQLGQEKNDRFYSHGKSLTRLSIQS 120

Query: 733  VIKSAVTTRTHPLPINPKSGLYLLLTSDDVHVENFCGQVCGFHYFTFPSIVGYTLPYAWV 554
            VI+SAVT RT PLPINP++GLYLLLTSDDV+V++FCGQVCGFHYFTFPSIVGYTLPYAWV
Sbjct: 121  VIRSAVTARTKPLPINPRNGLYLLLTSDDVYVQDFCGQVCGFHYFTFPSIVGYTLPYAWV 180

Query: 553  GNSAKQCPGFCAYPFAVPNYIPGLKPVKSPNNDAGVDGMISVIAHELAELATNPLVNAWY 374
            GNSAKQCPG CAYPFAVP + PG K +KSPN D GV+GMISVIAHE+AELATNPLVNAWY
Sbjct: 181  GNSAKQCPGVCAYPFAVPEFRPGWKALKSPNGDVGVEGMISVIAHEIAELATNPLVNAWY 240

Query: 373  AGQDPSFPTEIADLCEXXXXXXXXXXXXGQLMEDHDGATYNMNGMRRRFLVQWVWNPVVN 194
            AGQDPS P EIADLCE            GQ++ DHDGATYNMNG+RR+FLVQWVWN +V+
Sbjct: 241  AGQDPSAPVEIADLCEGIYGTGGGGSYTGQMLTDHDGATYNMNGIRRKFLVQWVWNHLVS 300

Query: 193  YCSGPNALD 167
            YC+GPNALD
Sbjct: 301  YCTGPNALD 309


>ref|XP_002264723.2| PREDICTED: uncharacterized protein LOC100266367 [Vitis vinifera]
          Length = 348

 Score =  520 bits (1339), Expect = e-145
 Identities = 247/349 (70%), Positives = 284/349 (81%), Gaps = 4/349 (1%)
 Frame = -3

Query: 1198 MHQGSVGRSSVPVXXXXXXXXXXLFITPVLGSTI----WPHHNINNTDLVFGASKKFEGS 1031
            M QG V R S P            F+    G+ +    WP+HN+N TDL FG SKK+EGS
Sbjct: 1    MGQGCVRRFSAPTLPMLLALILL-FLHLFAGNAVAWRPWPNHNVNATDLQFGGSKKYEGS 59

Query: 1030 SDFVHLRYHMGPVLTSNITVHLIWYGAWQKSQKKIIRGFLNSISAVDSKHPSVSSWWKTV 851
            S+FVHLRYHMGPVLT NITV++IWYG WQ++QKKIIR F+NSIS+ D+K PSV+ WW+TV
Sbjct: 60   SEFVHLRYHMGPVLTENITVNIIWYGTWQRAQKKIIREFINSISSRDAKRPSVAGWWRTV 119

Query: 850  QLYTDQTGANISRHVNVGDEKNDRFYSHGKSLTRLSIQSVIKSAVTTRTHPLPINPKSGL 671
              YTDQTGANISR +++  EK+DRFYSHGK LTRLSIQSVIKSAVT +T PLPINPKSG+
Sbjct: 120  TFYTDQTGANISRSLHLAAEKSDRFYSHGKKLTRLSIQSVIKSAVTAKTKPLPINPKSGI 179

Query: 670  YLLLTSDDVHVENFCGQVCGFHYFTFPSIVGYTLPYAWVGNSAKQCPGFCAYPFAVPNYI 491
            YLLLTSDDV+V++FCGQVCGFHYFTFPSIVGYTLPYAWVGNSAK CPG CAYPFAVP+YI
Sbjct: 180  YLLLTSDDVYVQDFCGQVCGFHYFTFPSIVGYTLPYAWVGNSAKLCPGMCAYPFAVPDYI 239

Query: 490  PGLKPVKSPNNDAGVDGMISVIAHELAELATNPLVNAWYAGQDPSFPTEIADLCEXXXXX 311
            PGLKP+KSPN DAG+DGMISVI HE+AELATNPLVNAWYAG DP FP EIADLCE     
Sbjct: 240  PGLKPLKSPNGDAGIDGMISVIGHEIAELATNPLVNAWYAGTDPVFPVEIADLCEGIYGT 299

Query: 310  XXXXXXXGQLMEDHDGATYNMNGMRRRFLVQWVWNPVVNYCSGPNALDQ 164
                   GQL++  DGATYNMNG+RRRFLVQW+W+ V++YC+GPNALDQ
Sbjct: 300  GGGGSYTGQLLDGEDGATYNMNGIRRRFLVQWLWSHVLSYCTGPNALDQ 348


>ref|XP_004148130.1| PREDICTED: uncharacterized protein LOC101209305 [Cucumis sativus]
            gi|449526565|ref|XP_004170284.1| PREDICTED:
            uncharacterized protein LOC101231285 [Cucumis sativus]
          Length = 346

 Score =  510 bits (1314), Expect = e-142
 Identities = 242/323 (74%), Positives = 271/323 (83%), Gaps = 3/323 (0%)
 Frame = -3

Query: 1123 ITPVLGSTIWPH---HNINNTDLVFGASKKFEGSSDFVHLRYHMGPVLTSNITVHLIWYG 953
            ++P      WPH    N+++   +   SKK+EGSS+FVHL+YHMGPVLT+NITVH+IWYG
Sbjct: 24   LSPAAAWRPWPHLAKSNVSDDPALVRDSKKYEGSSEFVHLKYHMGPVLTANITVHIIWYG 83

Query: 952  AWQKSQKKIIRGFLNSISAVDSKHPSVSSWWKTVQLYTDQTGANISRHVNVGDEKNDRFY 773
             WQ+ QKKIIR F+NSISA DSK PSV  WW+TVQLYTDQTGANISR V +G+EKNDRFY
Sbjct: 84   TWQRDQKKIIREFINSISAHDSKSPSVFGWWRTVQLYTDQTGANISRTVRLGEEKNDRFY 143

Query: 772  SHGKSLTRLSIQSVIKSAVTTRTHPLPINPKSGLYLLLTSDDVHVENFCGQVCGFHYFTF 593
            SHGKSLTRLSIQ+VIKSAVT ++ PLPIN K+GLYLLLTSDDV+VENFCGQVCGFHYFTF
Sbjct: 144  SHGKSLTRLSIQTVIKSAVTAKSRPLPINAKNGLYLLLTSDDVYVENFCGQVCGFHYFTF 203

Query: 592  PSIVGYTLPYAWVGNSAKQCPGFCAYPFAVPNYIPGLKPVKSPNNDAGVDGMISVIAHEL 413
            PSIVGYTLPYAWVGNS K CPG CAYPFAVP+YIPGLKP+KSPN D GVDGMISVIAHE+
Sbjct: 204  PSIVGYTLPYAWVGNSEKLCPGVCAYPFAVPSYIPGLKPMKSPNGDVGVDGMISVIAHEV 263

Query: 412  AELATNPLVNAWYAGQDPSFPTEIADLCEXXXXXXXXXXXXGQLMEDHDGATYNMNGMRR 233
            AELA+NPLVNAWYAG DP  P EIADLCE            GQLM+  DGATYNMNG+RR
Sbjct: 264  AELASNPLVNAWYAGGDPIAPVEIADLCEGIYGTGGGGSYTGQLMDGRDGATYNMNGIRR 323

Query: 232  RFLVQWVWNPVVNYCSGPNALDQ 164
            R+LVQWVWN VVNYC+GPNALDQ
Sbjct: 324  RYLVQWVWNHVVNYCTGPNALDQ 346


>ref|NP_199968.1| protein EXORDIUM like 3 [Arabidopsis thaliana]
            gi|16226762|gb|AAL16255.1|AF428325_1 AT5g51550/K17N15_10
            [Arabidopsis thaliana] gi|9758197|dbj|BAB08671.1| unnamed
            protein product [Arabidopsis thaliana]
            gi|332008714|gb|AED96097.1| protein EXORDIUM like 3
            [Arabidopsis thaliana]
          Length = 337

 Score =  507 bits (1306), Expect = e-141
 Identities = 237/304 (77%), Positives = 266/304 (87%)
 Frame = -3

Query: 1078 NNTDLVFGASKKFEGSSDFVHLRYHMGPVLTSNITVHLIWYGAWQKSQKKIIRGFLNSIS 899
            N +D +F ASKKFEGSS+ V LRYHMGPVLT+NITVH IWYG WQKSQKKIIR F+NSIS
Sbjct: 34   NGSDQIFDASKKFEGSSNLVRLRYHMGPVLTNNITVHPIWYGTWQKSQKKIIREFINSIS 93

Query: 898  AVDSKHPSVSSWWKTVQLYTDQTGANISRHVNVGDEKNDRFYSHGKSLTRLSIQSVIKSA 719
            AV SKHPSVS WWKTVQLYTDQTG+NI+  V +G+EKNDRFYSHGKSLTRLSIQSVIKSA
Sbjct: 94   AVGSKHPSVSGWWKTVQLYTDQTGSNITGTVRLGEEKNDRFYSHGKSLTRLSIQSVIKSA 153

Query: 718  VTTRTHPLPINPKSGLYLLLTSDDVHVENFCGQVCGFHYFTFPSIVGYTLPYAWVGNSAK 539
            VT+R+ PLP+NPKSGLYLLLT+DDV+V++FCGQVCGFHYFTFPSIVG+TLPYAWVGNSAK
Sbjct: 154  VTSRSRPLPVNPKSGLYLLLTADDVYVQDFCGQVCGFHYFTFPSIVGFTLPYAWVGNSAK 213

Query: 538  QCPGFCAYPFAVPNYIPGLKPVKSPNNDAGVDGMISVIAHELAELATNPLVNAWYAGQDP 359
             CPG CAYPFAVP +IPGLKPVKSPN D GVDGMISVIAHE+AELATNPLVNAWYAG DP
Sbjct: 214  LCPGVCAYPFAVPAFIPGLKPVKSPNGDVGVDGMISVIAHEIAELATNPLVNAWYAGPDP 273

Query: 358  SFPTEIADLCEXXXXXXXXXXXXGQLMEDHDGATYNMNGMRRRFLVQWVWNPVVNYCSGP 179
              P EIADLCE            GQ++ DH GATYN+NG+RRR+L+QW+W+ VV+YC+GP
Sbjct: 274  VAPVEIADLCEGIYGTGGGGSYTGQMLNDHSGATYNVNGIRRRYLIQWLWSHVVSYCTGP 333

Query: 178  NALD 167
            NALD
Sbjct: 334  NALD 337


Top