BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014338
         (890 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD83485.2| hypothetical protein (mitochondrion) [Nicotiana ...   213   6e-53
ref|YP_173421.1| hypothetical protein NitaMp079 [Nicotiana tabacum]   212   8e-53
ref|YP_005090469.1| ribosomal protein S1 (mitochondrion) [Millet...   208   2e-51
ref|YP_004237279.1| ribosomal protein S1 (mitochondrion) [Ricinu...   207   2e-51
gb|ABW22420.1| S1 ribosomal protein [Ononis spinosa]                  207   3e-51

>dbj|BAD83485.2| hypothetical protein (mitochondrion) [Nicotiana tabacum]
          Length = 216

 Score =  213 bits (541), Expect = 6e-53
 Identities = 106/201 (52%), Positives = 147/201 (73%), Gaps = 3/201 (1%)
 Frame = -1

Query: 836 MSSILSRSYLKSNASFLLCNGQALKATASHVIDGTYSVDSGIGSPKLCSKDELISTP--- 666
           MS  LSR + +SN+SF LC+G AL++    + +  + VD+G+G+P++C +DEL   P   
Sbjct: 17  MSIYLSRLFPRSNSSFFLCSGNALQSEVLRLREEMFLVDAGLGTPRICMQDELTGVPINR 76

Query: 665 NTTFETKVGFQNTRPKEQLIRSRVLQKLFVDIVAGDDRTKEKSTARFKSMVGATKDTVPG 486
            T FE KVGF +    E LI+ ++L++ F+D+VAG+   KE++ ARF  +VG+T D V G
Sbjct: 77  ATRFENKVGFLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGST-DVVAG 135

Query: 485 EPTILLPQRFRQVRAWEELNQIWRMNRKVKGFFIEKVRAGYLIAIAGYITFLPFRRVNPR 306
           EP +LLP+RFRQ RAW ELN+IWR N KVKGF IEKV+ GY +AIAG+ITFLPFRR   +
Sbjct: 136 EPLLLLPRRFRQNRAWMELNKIWRTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRR-RRK 194

Query: 305 RLANDQFTIDSIGPKKNNMVV 243
           R++ND+FTI++I PKK N+VV
Sbjct: 195 RISNDRFTIENINPKKTNIVV 215


>ref|YP_173421.1| hypothetical protein NitaMp079 [Nicotiana tabacum]
          Length = 216

 Score =  212 bits (540), Expect = 8e-53
 Identities = 106/201 (52%), Positives = 147/201 (73%), Gaps = 3/201 (1%)
 Frame = -1

Query: 836 MSSILSRSYLKSNASFLLCNGQALKATASHVIDGTYSVDSGIGSPKLCSKDELISTP--- 666
           MS  LSRS+ +SN+SF LC+G AL++    + +  + VD+G+G+P++C +DE    P   
Sbjct: 17  MSIYLSRSFPRSNSSFFLCSGNALQSEVLRLREEMFLVDAGLGTPRICMQDEPTGVPINR 76

Query: 665 NTTFETKVGFQNTRPKEQLIRSRVLQKLFVDIVAGDDRTKEKSTARFKSMVGATKDTVPG 486
            T FE KVGF +    E LI+ ++L++ F+D+VAG+   KE++ ARF  +VG+T D V G
Sbjct: 77  ATRFENKVGFLDLVAGESLIKEQILERFFIDLVAGESLIKERAAARFNDLVGST-DVVAG 135

Query: 485 EPTILLPQRFRQVRAWEELNQIWRMNRKVKGFFIEKVRAGYLIAIAGYITFLPFRRVNPR 306
           EP +LLP+RFRQ RAW ELN+IWR N KVKGF IEKV+ GY +AIAG+ITFLPFRR   +
Sbjct: 136 EPLLLLPRRFRQNRAWMELNKIWRTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRR-RRK 194

Query: 305 RLANDQFTIDSIGPKKNNMVV 243
           R++ND+FTI++I PKK N+VV
Sbjct: 195 RISNDRFTIENINPKKTNIVV 215


>ref|YP_005090469.1| ribosomal protein S1 (mitochondrion) [Millettia pinnata]
           gi|357197332|gb|AET62929.1| ribosomal protein S1
           (mitochondrion) [Millettia pinnata]
          Length = 204

 Score =  208 bits (529), Expect = 2e-51
 Identities = 105/204 (51%), Positives = 147/204 (72%), Gaps = 6/204 (2%)
 Frame = -1

Query: 836 MSSILSRSYLKSNASFLLCNGQALKATASHVIDGTYSVDSGIGSPKLCSKDELISTP--- 666
           MS  LSRS+ +SN+SF LC+G+AL++    + +  + VD+G+G+P++C +DE    P   
Sbjct: 1   MSIYLSRSFPRSNSSFFLCSGKALQSEVLRLGEEMFLVDAGLGTPRICMQDEPTGVPINR 60

Query: 665 NTTFETKVGFQNTRPKEQLIRSRVLQKLFVDIVAGDDRTKEKSTARFKSMVGATKDTVPG 486
            T FE KVG  +    E LI+ ++L++LF+D+VAG+   KE++ ARF  +VG+T D V G
Sbjct: 61  ATRFENKVGSLDLVAGESLIKKKILERLFIDLVAGESLIKERAAARFNDLVGST-DVVAG 119

Query: 485 EPTILLPQRFRQVRAWEELNQIWRMNRKVKGFFIEKVRAGYLIAIAGYITFLPFRRVNPR 306
           EP +LLP+RFRQ RAW ELN+IWR N KVKGF + KV+ GYL+AIAG+ITFLPFR    R
Sbjct: 120 EPLLLLPRRFRQNRAWMELNKIWRTNTKVKGFILNKVKGGYLVAIAGFITFLPFRSHKKR 179

Query: 305 R---LANDQFTIDSIGPKKNNMVV 243
           R   ++ND+FTI+SI PK+ N+VV
Sbjct: 180 RRKKISNDRFTIESINPKRTNIVV 203


>ref|YP_004237279.1| ribosomal protein S1 (mitochondrion) [Ricinus communis]
           gi|322394286|gb|ADW96043.1| ribosomal protein S1
           (mitochondrion) [Ricinus communis]
          Length = 201

 Score =  207 bits (528), Expect = 2e-51
 Identities = 102/201 (50%), Positives = 145/201 (72%), Gaps = 3/201 (1%)
 Frame = -1

Query: 836 MSSILSRSYLKSNASFLLCNGQALKATASHVIDGTYSVDSGIGSPKLCSKDELISTP--- 666
           MS  LSRS+ +SN+SF LC+G AL++    + +  + V++G+G+P++C +DE    P   
Sbjct: 1   MSIYLSRSFPRSNSSFFLCSGNALQSEVLRLREEMFLVNAGLGTPRICMQDEPTGVPINR 60

Query: 665 NTTFETKVGFQNTRPKEQLIRSRVLQKLFVDIVAGDDRTKEKSTARFKSMVGATKDTVPG 486
            T FE KVG       E +I+ ++L++ F+D+VAG+   KE++ ARF  +VG+T D V G
Sbjct: 61  ATRFENKVGSLGVVAGESMIKEQILERFFIDLVAGESMIKERAAARFNDLVGST-DVVAG 119

Query: 485 EPTILLPQRFRQVRAWEELNQIWRMNRKVKGFFIEKVRAGYLIAIAGYITFLPFRRVNPR 306
           EP +LLP+RFRQ RAW ELN+IWR N KVKGF IEKV+ GY +AIAG+ITFLPFR +  +
Sbjct: 120 EPLLLLPRRFRQNRAWMELNKIWRTNTKVKGFIIEKVKGGYSVAIAGFITFLPFRPLIRQ 179

Query: 305 RLANDQFTIDSIGPKKNNMVV 243
           R++ND+FTI+SI PK+ N+VV
Sbjct: 180 RISNDRFTIESINPKRTNIVV 200


>gb|ABW22420.1| S1 ribosomal protein [Ononis spinosa]
          Length = 205

 Score =  207 bits (527), Expect = 3e-51
 Identities = 106/204 (51%), Positives = 146/204 (71%), Gaps = 6/204 (2%)
 Frame = -1

Query: 836 MSSILSRSYLKSNASFLLCNGQALKATASHVIDGTYSVDSGIGSPKLCSKDELISTP--- 666
           MS  LSRS+ + N+S  LC+G+AL++    + +  + VD+G G+P+ C +DEL   P   
Sbjct: 2   MSIYLSRSFPRCNSSLFLCSGKALQSEVLRLGEEMFLVDAGPGTPRNCMQDELTGVPINR 61

Query: 665 NTTFETKVGFQNTRPKEQLIRSRVLQKLFVDIVAGDDRTKEKSTARFKSMVGATKDTVPG 486
            T FE KVGF +    E LI+ ++L++LF+D+VAG+   KE++ ARF  +VG+T D V G
Sbjct: 62  ATRFENKVGFLDLVAGESLIKKKILERLFIDLVAGESLIKERAAARFNDLVGST-DVVAG 120

Query: 485 EPTILLPQRFRQVRAWEELNQIWRMNRKVKGFFIEKVRAGYLIAIAGYITFLPFRRVN-- 312
           EP +LLP+RFRQ RAW +LN+IWR N KVKGF I+KV+ GY +AIAG+ITFLPFR  N  
Sbjct: 121 EPLLLLPRRFRQNRAWMKLNKIWRTNTKVKGFIIDKVKGGYSVAIAGFITFLPFRSHNKR 180

Query: 311 -PRRLANDQFTIDSIGPKKNNMVV 243
             RR++NDQFTI+SI PK+ N+VV
Sbjct: 181 KKRRISNDQFTIESINPKRTNIVV 204