BLASTX nr result

ID: Coptis24_contig00014323 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014323
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515189.1| Calcium-activated outward-rectifying potassi...   189   3e-46
ref|XP_002320260.1| outward rectifying potassium channel [Populu...   188   3e-46
ref|XP_002274039.1| PREDICTED: probable calcium-activated outwar...   187   1e-45
emb|CAN67132.1| hypothetical protein VITISV_040173 [Vitis vinifera]   187   1e-45
ref|XP_003554573.1| PREDICTED: probable calcium-activated outwar...   184   5e-45

>ref|XP_002515189.1| Calcium-activated outward-rectifying potassium channel, putative
           [Ricinus communis] gi|223545669|gb|EEF47173.1|
           Calcium-activated outward-rectifying potassium channel,
           putative [Ricinus communis]
          Length = 390

 Score =  189 bits (479), Expect = 3e-46
 Identities = 90/125 (72%), Positives = 106/125 (84%), Gaps = 4/125 (3%)
 Frame = +2

Query: 5   VGVVIYYLNREEYSGVETHPVVDAFYFCIITMCTIGYGDITPLTPTTKLFSCVFVLVGFG 184
           +GVVIY  NR+ +SG+ETHPVVDA YFCI+TMCTIGYGDI PLTP TK+F+CVFVLVGFG
Sbjct: 114 LGVVIYSFNRDNFSGIETHPVVDALYFCIVTMCTIGYGDIAPLTPATKVFACVFVLVGFG 173

Query: 185 LIHVLLTGALSYVLDLQENMILTSIQVGD----HSGFSAKKYIFDVEKGRMRIRMKVGFA 352
            I +LL+G ++YVLDLQE+MIL  IQ+G+    H GFSA+ YI DVEKGRMRIR+KVG A
Sbjct: 174 FIDILLSGVVNYVLDLQESMILAGIQMGNNRTAHEGFSARNYIVDVEKGRMRIRLKVGLA 233

Query: 353 LGVVV 367
           LGVVV
Sbjct: 234 LGVVV 238


>ref|XP_002320260.1| outward rectifying potassium channel [Populus trichocarpa]
           gi|222861033|gb|EEE98575.1| outward rectifying potassium
           channel [Populus trichocarpa]
          Length = 318

 Score =  188 bits (478), Expect = 3e-46
 Identities = 89/124 (71%), Positives = 107/124 (86%), Gaps = 3/124 (2%)
 Frame = +2

Query: 5   VGVVIYYLNREEYSGVETHPVVDAFYFCIITMCTIGYGDITPLTPTTKLFSCVFVLVGFG 184
           +GV+IY  N + +SG+ETHPVVDA YFCI+TMCTIGYGDITPLTP TK+F+CVFVLVGFG
Sbjct: 47  LGVIIYSFNTDHFSGIETHPVVDALYFCIVTMCTIGYGDITPLTPVTKVFACVFVLVGFG 106

Query: 185 LIHVLLTGALSYVLDLQENMILTSIQVG---DHSGFSAKKYIFDVEKGRMRIRMKVGFAL 355
            I +LL+G ++YVLDLQE+MILT I++G   +H GFSA  YIFDV+KGRMRIR+KVG AL
Sbjct: 107 FIDILLSGLVNYVLDLQESMILTGIEMGKNRNHEGFSATDYIFDVKKGRMRIRLKVGLAL 166

Query: 356 GVVV 367
           GVVV
Sbjct: 167 GVVV 170


>ref|XP_002274039.1| PREDICTED: probable calcium-activated outward-rectifying potassium
           channel 5, chloroplastic [Vitis vinifera]
          Length = 390

 Score =  187 bits (474), Expect = 1e-45
 Identities = 91/123 (73%), Positives = 104/123 (84%), Gaps = 2/123 (1%)
 Frame = +2

Query: 5   VGVVIYYLNREEYSGVETHPVVDAFYFCIITMCTIGYGDITPLTPTTKLFSCVFVLVGFG 184
           +GVVIY  NR+ +SG+ETH VVDA YFCI+TMCTIGYGDI PLTP TK+F+CVFVLVGFG
Sbjct: 116 LGVVIYSFNRDNFSGIETHAVVDALYFCIVTMCTIGYGDIAPLTPATKVFACVFVLVGFG 175

Query: 185 LIHVLLTGALSYVLDLQENMILTSIQVG--DHSGFSAKKYIFDVEKGRMRIRMKVGFALG 358
            I +LL+G ++YVLDLQENMILT IQVG     GFSA+ YI DVEKGRMRIR+KVG ALG
Sbjct: 176 FIDILLSGVVNYVLDLQENMILTGIQVGGAPAGGFSARNYIVDVEKGRMRIRLKVGLALG 235

Query: 359 VVV 367
           VVV
Sbjct: 236 VVV 238


>emb|CAN67132.1| hypothetical protein VITISV_040173 [Vitis vinifera]
          Length = 390

 Score =  187 bits (474), Expect = 1e-45
 Identities = 91/123 (73%), Positives = 104/123 (84%), Gaps = 2/123 (1%)
 Frame = +2

Query: 5   VGVVIYYLNREEYSGVETHPVVDAFYFCIITMCTIGYGDITPLTPTTKLFSCVFVLVGFG 184
           +GVVIY  NR+ +SG+ETH VVDA YFCI+TMCTIGYGDI PLTP TK+F+CVFVLVGFG
Sbjct: 116 LGVVIYSFNRDNFSGIETHAVVDALYFCIVTMCTIGYGDIAPLTPATKVFACVFVLVGFG 175

Query: 185 LIHVLLTGALSYVLDLQENMILTSIQVG--DHSGFSAKKYIFDVEKGRMRIRMKVGFALG 358
            I +LL+G ++YVLDLQENMILT IQVG     GFSA+ YI DVEKGRMRIR+KVG ALG
Sbjct: 176 FIDILLSGVVNYVLDLQENMILTGIQVGGAPAGGFSARNYIVDVEKGRMRIRLKVGLALG 235

Query: 359 VVV 367
           VVV
Sbjct: 236 VVV 238


>ref|XP_003554573.1| PREDICTED: probable calcium-activated outward-rectifying potassium
           channel 5, chloroplastic-like [Glycine max]
          Length = 385

 Score =  184 bits (468), Expect = 5e-45
 Identities = 87/123 (70%), Positives = 104/123 (84%), Gaps = 2/123 (1%)
 Frame = +2

Query: 5   VGVVIYYLNREEYSGVETHPVVDAFYFCIITMCTIGYGDITPLTPTTKLFSCVFVLVGFG 184
           +GVVIY  NR+ +SG+ETHPVVDA YFCI+TMCTIGYGDI PLTP TK+F+C FVLVGFG
Sbjct: 111 IGVVIYSFNRDRFSGIETHPVVDALYFCIVTMCTIGYGDIAPLTPFTKIFACAFVLVGFG 170

Query: 185 LIHVLLTGALSYVLDLQENMILTSIQVG--DHSGFSAKKYIFDVEKGRMRIRMKVGFALG 358
            I +LL+G +++VLDLQENMILT +Q+G  +  GFSA+ YI DV KGRMRIR+KVG ALG
Sbjct: 171 FIDILLSGLVNFVLDLQENMILTGLQMGASEREGFSARNYIVDVAKGRMRIRLKVGLALG 230

Query: 359 VVV 367
           VVV
Sbjct: 231 VVV 233


Top