BLASTX nr result

ID: Coptis24_contig00014211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014211
         (1479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272712.1| PREDICTED: uncharacterized protein C20orf4 h...   523   e-146
ref|XP_002534269.1| Protein C20orf4, putative [Ricinus communis]...   488   e-135
ref|XP_002301711.1| predicted protein [Populus trichocarpa] gi|2...   487   e-135
ref|XP_003544236.1| PREDICTED: uncharacterized protein C20orf4 h...   484   e-134
ref|XP_003616397.1| hypothetical protein MTR_5g079770 [Medicago ...   482   e-134

>ref|XP_002272712.1| PREDICTED: uncharacterized protein C20orf4 homolog [Vitis vinifera]
            gi|296087181|emb|CBI33555.3| unnamed protein product
            [Vitis vinifera]
          Length = 394

 Score =  523 bits (1348), Expect = e-146
 Identities = 260/390 (66%), Positives = 297/390 (76%)
 Frame = +3

Query: 42   MDVETARELVKKGGTLLLLDVPQFTLFGIDTQVFSTGPNFKGVKMIPPGPHFVYYSSSTR 221
            M+ ETA  LV+ G TLLLLDVPQFTL GIDT +FS GP FKG+KMIPPGPHFVYYSSS R
Sbjct: 1    MEPETALGLVRNGATLLLLDVPQFTLIGIDTLMFSVGPVFKGIKMIPPGPHFVYYSSSNR 60

Query: 222  DGSEFSPIVGFFIYTYPSQVIVRKWDQQXXXXXXXXXXXXXXYWAAVKNFKFDSHLGPYA 401
            DGS+FSPIVGFFI T PS+VIVRKWDQQ              Y  +VK+ +FD  LGPY 
Sbjct: 61   DGSKFSPIVGFFIDTCPSEVIVRKWDQQDERLVKLSEEEEERYCQSVKSLEFDRELGPYT 120

Query: 402  LNHFGDWKNMFNYITKSTIERIEPIGGEIAVTHESELADTVHKTAMEKALVEQLRNSKFS 581
            L+ +GDWK + N ITK+TIERIEPIGGEI V HESE+     KT+MEKAL +QLRNSKFS
Sbjct: 121  LSQYGDWKRLSNSITKTTIERIEPIGGEITVAHESEMVGNTPKTSMEKALDQQLRNSKFS 180

Query: 582  KSSEKVNNRNCYYTPIPRDVKRKGISGEELTSLNLDKTQLLETILTKHYGGVEDLLLGEL 761
            KS++K   R CYYT IPR +KRKGI G+ELTSLNLDKTQLLE+IL K YGG EDLLLGEL
Sbjct: 181  KSADKSQKRGCYYTSIPRVIKRKGIHGQELTSLNLDKTQLLESILMKDYGGSEDLLLGEL 240

Query: 762  QFAFVAFLMGQSLQAFLQWKAIVTLLFSCTEAPFSTRSHLFTKFVKVIYHQMKFGLQNDH 941
            QFAF+AFLMGQSL+ FLQWK++V+LLF C EAPF TRS LFTKF++VIY+Q+KFG Q D 
Sbjct: 241  QFAFIAFLMGQSLEGFLQWKSLVSLLFGCNEAPFHTRSLLFTKFIRVIYYQLKFGFQKDQ 300

Query: 942  TSISGHEKGTVFFLDDSWFSKDNFLHHLCKEFFLLVLEASVVDGDLLSWXXXXXXXXXXX 1121
            T  S  EK +   LD+SW S D+FLHHLCK+FF LV EASVVDGDLLSW           
Sbjct: 301  TGSSNVEKESSLLLDESWLSADSFLHHLCKDFFSLVQEASVVDGDLLSWTRKLRDLLENT 360

Query: 1122 XGWDFQQNSAACDFYGEDDEYAPVVEMLDD 1211
             GWDFQQ S     Y E+DE+APVVEML+D
Sbjct: 361  LGWDFQQTSTVDGLYCEEDEFAPVVEMLED 390


>ref|XP_002534269.1| Protein C20orf4, putative [Ricinus communis]
            gi|223525600|gb|EEF28112.1| Protein C20orf4, putative
            [Ricinus communis]
          Length = 409

 Score =  488 bits (1255), Expect = e-135
 Identities = 245/402 (60%), Positives = 296/402 (73%), Gaps = 4/402 (0%)
 Frame = +3

Query: 36   EKMDVETARELVKKGGTLLLLDVPQFTLFGIDTQVFSTGPNFKGVKMIPPGPHFVYYSSS 215
            + MD ETA + VK+G TLLLLDVPQ+TLFGIDTQVF+ GP FKGVKMIPPG HFVYYSSS
Sbjct: 2    QSMDPETALDFVKQGATLLLLDVPQYTLFGIDTQVFTVGPAFKGVKMIPPGTHFVYYSSS 61

Query: 216  TRDGSEFSPIVGFFIYTYPSQVIVRKWDQQXXXXXXXXXXXXXXYWAAVKNFKFDSHLGP 395
            +RDG +FSPI+GFF+   PS+VIVRKW +Q              +  AVK+ +FD +LGP
Sbjct: 62   SRDGKDFSPIIGFFVDAGPSEVIVRKWVRQEERLVKVSEEEEERFSQAVKSLEFDRNLGP 121

Query: 396  YALNHFGDWKNMFNYITKSTIERIEPIGGEIAVTHESELADTVHKTAMEKALVEQLRNSK 575
            Y LN +G+WK + NY+ K+ IERIEPIGGEI +  ES +  +  KTAMEKAL EQLRNSK
Sbjct: 122  YNLNQYGEWKRLSNYVRKNVIERIEPIGGEITIESESGITRSSPKTAMEKALDEQLRNSK 181

Query: 576  FSKSS--EKVNNRNCYYTPIPRDVKRKGISGEELTSLNLDKTQLLETILTKHYGGVEDLL 749
             S S+  +K   R CYYT IP  +KR+GI   ELTSLNLDKT+LLE IL K YGG EDLL
Sbjct: 182  CSVSASVDKAEKRGCYYTSIPHVIKRRGIYSAELTSLNLDKTELLENILVKDYGGSEDLL 241

Query: 750  LGELQFAFVAFLMGQSLQAFLQWKAIVTLLFSCTEAPFSTRSHLFTKFVKVIYHQMKFGL 929
            +GELQFAF+AFLMGQSL+AF QWK++V+LL  CTEAP  TRS LFTKF+KVIY+Q+K+GL
Sbjct: 242  IGELQFAFIAFLMGQSLEAFFQWKSLVSLLLGCTEAPLRTRSRLFTKFIKVIYYQLKYGL 301

Query: 930  QNDHTSISGHEKGTVFFLDDSWFSKDNFLHHLCKEFFLLVLEASVVDGDLLSWXXXXXXX 1109
            Q D    +    G    LD+SWFS D+FLH LCK+FFLLV +ASVVDGDLL+W       
Sbjct: 302  QKDKAETNDAGVGVSTLLDESWFSADSFLHQLCKDFFLLVQDASVVDGDLLTWTRKLKEL 361

Query: 1110 XXXXXGWDFQQNSAACD--FYGEDDEYAPVVEMLDDMNFHEA 1229
                 GW+FQQNSA  D  ++ ++DEYAPVV MLDD + +EA
Sbjct: 362  LESSLGWEFQQNSAMDDGIYFEDNDEYAPVVVMLDDTSNNEA 403


>ref|XP_002301711.1| predicted protein [Populus trichocarpa] gi|222843437|gb|EEE80984.1|
            predicted protein [Populus trichocarpa]
          Length = 402

 Score =  487 bits (1254), Expect = e-135
 Identities = 240/397 (60%), Positives = 300/397 (75%), Gaps = 3/397 (0%)
 Frame = +3

Query: 42   MDVETARELVKKGGTLLLLDVPQFTLFGIDTQVFSTGPNFKGVKMIPPGPHFVYYSSSTR 221
            MD ETA ELVK+G TLLLLDVPQ+TL GIDTQ+F+ GP FKG+KMIPPGPHFVYYSSS++
Sbjct: 1    MDPETALELVKQGATLLLLDVPQYTLVGIDTQMFTVGPAFKGIKMIPPGPHFVYYSSSSK 60

Query: 222  DGSEFSPIVGFFIYTYPSQVIVRKWDQQXXXXXXXXXXXXXXYWAAVKNFKFDSHLGPYA 401
            DG +FSPIVGFF+   PS+VIVRKW+QQ              +  AVK+ +FD +LGPY 
Sbjct: 61   DGKQFSPIVGFFVDADPSEVIVRKWNQQEERLVKVPEDEEERFCQAVKSLEFDRYLGPYN 120

Query: 402  LNHFGDWKNMFNYITKSTIERIEPIGGEIAVTHESELADTVHKTAMEKALVEQLRNSKFS 581
            L+ +G+WK + +Y+TK+ I+RIEPIGGEI V  ESE+     KT++E+AL  QL   KFS
Sbjct: 121  LSQYGEWKQLSSYLTKTIIKRIEPIGGEITVACESEMDKNSPKTSIERALHAQLGTGKFS 180

Query: 582  KSS--EKVNNRNCYYTPIPRDVKRKGISGEELTSLNLDKTQLLETILTKHYGGVEDLLLG 755
             S+  ++   R CYYT IPR +KR+G+ G+ELTSLNLDKT+LLE++L K YGG EDLLLG
Sbjct: 181  ASTSVDRSKKRGCYYTTIPRVIKRRGMEGKELTSLNLDKTELLESVLIKDYGGSEDLLLG 240

Query: 756  ELQFAFVAFLMGQSLQAFLQWKAIVTLLFSCTEAPFSTRSHLFTKFVKVIYHQMKFGLQN 935
            ELQFA++AFLMGQSL+AF QWK++V+LL SC EAPF TRSHLFTKF+KVI++Q+K+GLQ 
Sbjct: 241  ELQFAYIAFLMGQSLEAFFQWKSLVSLLLSCIEAPFRTRSHLFTKFIKVIFYQLKYGLQK 300

Query: 936  DHTSISGHEKGTVFFLDDSWFSKDNFLHHLCKEFFLLVLEASVVDGDLLSWXXXXXXXXX 1115
            D    +G        LD+SWFS D+FLH LCK+FFLLVL+A+VVDGDLL+W         
Sbjct: 301  DRKESNGAGIAVSSLLDESWFSADSFLHRLCKDFFLLVLDATVVDGDLLTWTRKLKELLE 360

Query: 1116 XXXGWDFQQNSAACDFY-GEDDEYAPVVEMLDDMNFH 1223
               GW+FQQNSA    Y  EDDE+APVVEMLD+ +F+
Sbjct: 361  NILGWEFQQNSAVDGIYFEEDDEFAPVVEMLDESSFN 397


>ref|XP_003544236.1| PREDICTED: uncharacterized protein C20orf4 homolog [Glycine max]
          Length = 391

 Score =  484 bits (1245), Expect = e-134
 Identities = 247/391 (63%), Positives = 285/391 (72%), Gaps = 1/391 (0%)
 Frame = +3

Query: 42   MDVETARELVKKGGTLLLLDVPQFTLFGIDTQVFSTGPNFKGVKMIPPGPHFVYYSSSTR 221
            MD ETA ELVK G TLLLLDVPQ+TL  +DTQ+FS GP FKG+KMIPPG HFVYYSSS+R
Sbjct: 1    MDPETALELVKHGVTLLLLDVPQYTLVAVDTQMFSVGPAFKGIKMIPPGVHFVYYSSSSR 60

Query: 222  DGSEFSPIVGFFIYTYPSQVIVRKWDQQXXXXXXXXXXXXXXYWAAVKNFKFDSHLGPYA 401
            DG EFS I+GFFI   PS+VIVRKWDQQ              Y  AVKN +FD  LGPY 
Sbjct: 61   DGKEFSSIIGFFIDAGPSEVIVRKWDQQEERLIKLSEEEEERYSQAVKNLEFDRQLGPYN 120

Query: 402  LNHFGDWKNMFNYITKSTIERIEPIGGEIAVTHESELADTVHKTAMEKALVEQLRNSKFS 581
            L+H+ DWK + N+ITKS IER+EPIGGEI V  E+E+     K  ME AL +QL+    +
Sbjct: 121  LSHYEDWKQLSNFITKSVIERLEPIGGEITVECENEIVRNATKMPMEDALGKQLKVGNSA 180

Query: 582  KSSEKVNNRNCYYTPIPRDVKRKGISGEELTSLNLDKTQLLETILTKHYGGVEDLLLGEL 761
             S  K   + CYYT IP  VK KGISG+ELTSLNLDKTQLLET+L K YGG EDLLLGEL
Sbjct: 181  TSVGKSQRKGCYYTSIPHVVKCKGISGQELTSLNLDKTQLLETLLAKDYGGSEDLLLGEL 240

Query: 762  QFAFVAFLMGQSLQAFLQWKAIVTLLFSCTEAPFSTRSHLFTKFVKVIYHQMKFGLQNDH 941
            QFAFVAFLMGQSL+AFLQWK++V+LLF CTEAPF TR+HLFTKF+KVIY+Q+K+GLQ DH
Sbjct: 241  QFAFVAFLMGQSLEAFLQWKSLVSLLFGCTEAPFRTRTHLFTKFIKVIYNQLKYGLQKDH 300

Query: 942  TSISGHEKGTVFFLDDSWFSKDNFLHHLCKEFFLLVLEASVVDGDLLSWXXXXXXXXXXX 1121
               +G        LDDSW S D+FLHHLCK+FF  +L+ SVVDGDLL W           
Sbjct: 301  MGETGSA-----LLDDSWISADSFLHHLCKDFFSSLLDGSVVDGDLLKWTRKFKELLERN 355

Query: 1122 XGWDFQQNSAACDFY-GEDDEYAPVVEMLDD 1211
             GW+FQQ+SA    Y  E+DEYAPVVEMLDD
Sbjct: 356  LGWEFQQSSAVDGMYFEENDEYAPVVEMLDD 386


>ref|XP_003616397.1| hypothetical protein MTR_5g079770 [Medicago truncatula]
            gi|355517732|gb|AES99355.1| hypothetical protein
            MTR_5g079770 [Medicago truncatula]
          Length = 391

 Score =  482 bits (1241), Expect = e-134
 Identities = 243/391 (62%), Positives = 286/391 (73%), Gaps = 1/391 (0%)
 Frame = +3

Query: 42   MDVETARELVKKGGTLLLLDVPQFTLFGIDTQVFSTGPNFKGVKMIPPGPHFVYYSSSTR 221
            MD +TA ELVK G TLL LDVPQ+TL  IDTQVFS GP FKG+KMIPPG HFVYYSSSTR
Sbjct: 1    MDSQTALELVKNGVTLLFLDVPQYTLVAIDTQVFSVGPTFKGIKMIPPGTHFVYYSSSTR 60

Query: 222  DGSEFSPIVGFFIYTYPSQVIVRKWDQQXXXXXXXXXXXXXXYWAAVKNFKFDSHLGPYA 401
            DG EFSP++GFFI   PS+VIVRKWDQQ              Y  AVKN +FD  LGPY 
Sbjct: 61   DGKEFSPMIGFFIDAGPSEVIVRKWDQQEERLVKVSEEEDERYRLAVKNMEFDRQLGPYN 120

Query: 402  LNHFGDWKNMFNYITKSTIERIEPIGGEIAVTHESELADTVHKTAMEKALVEQLRNSKFS 581
            L+H+ DWK + ++ITKS IER+EPIGGE++V  E+++     KT MEKAL  QL+    +
Sbjct: 121  LSHYEDWKRLSDFITKSIIERLEPIGGEVSVECENDMFRNAPKTPMEKALDTQLKVDNSA 180

Query: 582  KSSEKVNNRNCYYTPIPRDVKRKGISGEELTSLNLDKTQLLETILTKHYGGVEDLLLGEL 761
             S  K+  + CYYT IPR VK KGISG+ELTSLNLDKTQLLET+L K YGG EDLLLGEL
Sbjct: 181  TSVGKLQRKGCYYTSIPRVVKCKGISGQELTSLNLDKTQLLETLLVKDYGGSEDLLLGEL 240

Query: 762  QFAFVAFLMGQSLQAFLQWKAIVTLLFSCTEAPFSTRSHLFTKFVKVIYHQMKFGLQNDH 941
            QFAF+A +MGQSL+AFLQWK++V+LL  CTEAPF TR+ LFTKF+KVIY+Q+K+GLQ D 
Sbjct: 241  QFAFIALMMGQSLEAFLQWKSLVSLLLGCTEAPFHTRTRLFTKFIKVIYYQLKYGLQKDR 300

Query: 942  TSISGHEKGTVFFLDDSWFSKDNFLHHLCKEFFLLVLEASVVDGDLLSWXXXXXXXXXXX 1121
               +G        LDDSWFS D+FLHH CKEFF LVL+ SV+DGDLL W           
Sbjct: 301  KDNTG-----PLLLDDSWFSTDSFLHHHCKEFFSLVLDGSVIDGDLLKWTRKFKKLLESN 355

Query: 1122 XGWDFQQNSAACDFY-GEDDEYAPVVEMLDD 1211
             GW+FQQN+A    Y  E+DE+APVVEMLDD
Sbjct: 356  LGWEFQQNNAVDGLYFDENDEFAPVVEMLDD 386


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