BLASTX nr result

ID: Coptis24_contig00014203 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014203
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274136.2| PREDICTED: uncharacterized protein At1g76660...   244   9e-63
ref|XP_002300608.1| predicted protein [Populus trichocarpa] gi|2...   240   1e-62
ref|XP_002510760.1| conserved hypothetical protein [Ricinus comm...   241   6e-62
ref|XP_003550451.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   234   3e-60
ref|XP_004150969.1| PREDICTED: uncharacterized protein At1g76660...   235   4e-60

>ref|XP_002274136.2| PREDICTED: uncharacterized protein At1g76660-like [Vitis vinifera]
          Length = 484

 Score =  244 bits (622), Expect = 9e-63
 Identities = 122/158 (77%), Positives = 133/158 (84%), Gaps = 1/158 (0%)
 Frame = -1

Query: 491 SSSTIFTNSALPSTAQSASCFLSMSANSPGGPSN-VYATGPYAHETQLVSPPVFSTFTTE 315
           SS   FTNSALPSTAQS SCFLSMSANSP GPS+ ++ATGPYAHETQLVSPPVFSTFTTE
Sbjct: 82  SSPASFTNSALPSTAQSPSCFLSMSANSPEGPSSTMFATGPYAHETQLVSPPVFSTFTTE 141

Query: 314 PSTAPFTPPPELNHLTTPSSPDVPFALTFSSAMDLKGTSRSSYVTANDLQVTYPLYPESP 135
           PSTAP TPPPEL HLTTPSSPDVPFA   SS+MDLK   +++Y+ ANDLQ TY LYP SP
Sbjct: 142 PSTAPLTPPPELAHLTTPSSPDVPFAQFLSSSMDLKSAGKTNYIAANDLQATYSLYPGSP 201

Query: 134 ASSLTSPILGTSGDCLSSSFPEREFPAKWAASISAQDS 21
           ASSL SPI  TSGDCLSSSFPEREFP +W  SIS Q++
Sbjct: 202 ASSLISPISRTSGDCLSSSFPEREFPPRWDPSISPQNA 239


>ref|XP_002300608.1| predicted protein [Populus trichocarpa] gi|222842334|gb|EEE79881.1|
           predicted protein [Populus trichocarpa]
          Length = 470

 Score =  240 bits (612), Expect(2) = 1e-62
 Identities = 120/163 (73%), Positives = 134/163 (82%), Gaps = 1/163 (0%)
 Frame = -1

Query: 491 SSSTIFTNSALPSTAQSASCFLSMSANSPGGPSN-VYATGPYAHETQLVSPPVFSTFTTE 315
           SS   FTNSALPSTAQS SCFLS+SANSPGGPS+ +YATGPYAHETQLVSPPVFSTFTTE
Sbjct: 70  SSPASFTNSALPSTAQSPSCFLSLSANSPGGPSSTMYATGPYAHETQLVSPPVFSTFTTE 129

Query: 314 PSTAPFTPPPELNHLTTPSSPDVPFALTFSSAMDLKGTSRSSYVTANDLQVTYPLYPESP 135
           PSTAP TPPPEL HLTTPSSPDVPFA   +S+ DLKG  +++Y+ A+DLQ TY LYP SP
Sbjct: 130 PSTAPLTPPPELAHLTTPSSPDVPFAQFLTSSRDLKGAEKNNYIVASDLQSTYSLYPGSP 189

Query: 134 ASSLTSPILGTSGDCLSSSFPEREFPAKWAASISAQDSFRSSS 6
           ASSL SPI  TSGDCLS+SFPER FP +W  S+S Q+   S S
Sbjct: 190 ASSLLSPISRTSGDCLSASFPERGFPREWGPSVSPQNGKYSRS 232



 Score = 25.4 bits (54), Expect(2) = 1e-62
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -2

Query: 547 NGAQPVGMPNQAT 509
           NG QPVG+ NQAT
Sbjct: 47  NGPQPVGLTNQAT 59


>ref|XP_002510760.1| conserved hypothetical protein [Ricinus communis]
           gi|223551461|gb|EEF52947.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 472

 Score =  241 bits (615), Expect = 6e-62
 Identities = 121/164 (73%), Positives = 135/164 (82%), Gaps = 1/164 (0%)
 Frame = -1

Query: 491 SSSTIFTNSALPSTAQSASCFLSMSANSPGGPSN-VYATGPYAHETQLVSPPVFSTFTTE 315
           SS   FTNSALPSTAQS SCFLS+SANSPGGPS+ ++ATGPYAHETQLVSPPVFSTFTTE
Sbjct: 76  SSPASFTNSALPSTAQSPSCFLSLSANSPGGPSSTMFATGPYAHETQLVSPPVFSTFTTE 135

Query: 314 PSTAPFTPPPELNHLTTPSSPDVPFALTFSSAMDLKGTSRSSYVTANDLQVTYPLYPESP 135
           PSTAP TPPPEL HLTTPSSPDVPFA   SS++DLK T +++Y+ ANDLQ TY LYP SP
Sbjct: 136 PSTAPLTPPPELAHLTTPSSPDVPFAHFLSSSVDLKSTEKANYIAANDLQATYSLYPGSP 195

Query: 134 ASSLTSPILGTSGDCLSSSFPEREFPAKWAASISAQDSFRSSSS 3
           ASSL SPI  TSGDCLSSSFP REFP  W  ++S Q+   S S+
Sbjct: 196 ASSLISPISRTSGDCLSSSFPGREFPPHWDPTVSPQNGKYSRSN 239


>ref|XP_003550451.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           At1g76660-like [Glycine max]
          Length = 475

 Score =  234 bits (597), Expect(2) = 3e-60
 Identities = 116/157 (73%), Positives = 131/157 (83%), Gaps = 1/157 (0%)
 Frame = -1

Query: 491 SSSTIFTNSALPSTAQSASCFLSMSANSPGGPSN-VYATGPYAHETQLVSPPVFSTFTTE 315
           SS   FT+SALPSTAQS SCFLS+SANSPGGPS+ ++ATGPYAHETQLVSPPVFS FTTE
Sbjct: 76  SSPASFTHSALPSTAQSPSCFLSLSANSPGGPSSTMFATGPYAHETQLVSPPVFSNFTTE 135

Query: 314 PSTAPFTPPPELNHLTTPSSPDVPFALTFSSAMDLKGTSRSSYVTANDLQVTYPLYPESP 135
           PSTAP TPPPEL HLTTPSSPDVPFA   SS++DLK   + +Y+TANDLQ TY LYP SP
Sbjct: 136 PSTAPLTPPPELAHLTTPSSPDVPFAHFLSSSVDLKNNGKGNYITANDLQATYSLYPGSP 195

Query: 134 ASSLTSPILGTSGDCLSSSFPEREFPAKWAASISAQD 24
           ASSL SPI   SGDCLSSSFPEREF  +W +S+S ++
Sbjct: 196 ASSLISPISRNSGDCLSSSFPEREFHPQWDSSLSPEN 232



 Score = 23.1 bits (48), Expect(2) = 3e-60
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 556 NRANGAQPVGMPNQATNI 503
           ++ NG Q VG+ NQAT +
Sbjct: 50  SQPNGPQVVGLTNQATGL 67


>ref|XP_004150969.1| PREDICTED: uncharacterized protein At1g76660-like [Cucumis sativus]
          Length = 469

 Score =  235 bits (599), Expect = 4e-60
 Identities = 116/157 (73%), Positives = 129/157 (82%), Gaps = 1/157 (0%)
 Frame = -1

Query: 491 SSSTIFTNSALPSTAQSASCFLSMSANSPGGPSN-VYATGPYAHETQLVSPPVFSTFTTE 315
           SS   FTNSALPST QS SCFLS+SANSPGGPS+ +YATGPYAH+TQLVSPPVFS F TE
Sbjct: 76  SSPASFTNSALPSTVQSPSCFLSLSANSPGGPSSTMYATGPYAHDTQLVSPPVFSAFNTE 135

Query: 314 PSTAPFTPPPELNHLTTPSSPDVPFALTFSSAMDLKGTSRSSYVTANDLQVTYPLYPESP 135
           PSTAP TPPPEL HLTTPSSPDVPFA   SS+ DLKGT +++Y+ +NDLQ  Y LYP SP
Sbjct: 136 PSTAPLTPPPELAHLTTPSSPDVPFAQFLSSSEDLKGTGKANYIASNDLQAAYSLYPGSP 195

Query: 134 ASSLTSPILGTSGDCLSSSFPEREFPAKWAASISAQD 24
           ASSL SPI  TSGDCLSSSFPER+F  +W +S S QD
Sbjct: 196 ASSLVSPISRTSGDCLSSSFPERDFRPQWNSSASLQD 232


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