BLASTX nr result

ID: Coptis24_contig00014117 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014117
         (554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632516.1| PREDICTED: uncharacterized protein LOC100854...    72   5e-11
ref|XP_002533928.1| conserved hypothetical protein [Ricinus comm...    65   6e-09
ref|XP_002307117.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_002335471.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_003538507.1| PREDICTED: uncharacterized protein LOC100306...    62   5e-08

>ref|XP_003632516.1| PREDICTED: uncharacterized protein LOC100854604 [Vitis vinifera]
           gi|147845604|emb|CAN78486.1| hypothetical protein
           VITISV_024015 [Vitis vinifera]
          Length = 89

 Score = 72.4 bits (176), Expect = 5e-11
 Identities = 44/89 (49%), Positives = 52/89 (58%), Gaps = 15/89 (16%)
 Frame = +1

Query: 193 MADIAILIAEEYERRVKEYQKG------------EDITLVSCVSVMGQRLNELSWAKVEV 336
           M+DIA+L+AEEYERRVK  +K             E+I  VS VS +  RL   SW K  V
Sbjct: 1   MSDIAMLVAEEYERRVKNSKKSGGGGEGGGGAAAEEIGFVSSVSAIAMRLEGFSWVKKAV 60

Query: 337 ---KTELAKRVLDPKSSFGLAACNGLFSA 414
               TE+ K VL+PKS  GLAA NG FSA
Sbjct: 61  GEENTEIVKWVLEPKSQIGLAAINGFFSA 89


>ref|XP_002533928.1| conserved hypothetical protein [Ricinus communis]
           gi|223526108|gb|EEF28457.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 78

 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 41/81 (50%), Positives = 52/81 (64%), Gaps = 7/81 (8%)
 Frame = +1

Query: 193 MADIAILIAEEYERRVKEYQKGE------DITLVSCVSVMGQRL-NELSWAKVEVKTELA 351
           MADIA+L+AEEYERRVK  +K        +I  VSCVS+  Q L N+     +E+   +A
Sbjct: 1   MADIAMLVAEEYERRVKNSRKASADNGEVEINWVSCVSLATQSLKNKFMQENIEL---IA 57

Query: 352 KRVLDPKSSFGLAACNGLFSA 414
           K VL+PK+  GLAA NG FSA
Sbjct: 58  KWVLEPKTQIGLAASNGFFSA 78


>ref|XP_002307117.1| predicted protein [Populus trichocarpa] gi|222856566|gb|EEE94113.1|
           predicted protein [Populus trichocarpa]
          Length = 77

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 42/81 (51%), Positives = 54/81 (66%), Gaps = 7/81 (8%)
 Frame = +1

Query: 193 MADIAILIAEEYERRVKEYQK---GE---DITLVSCVSVMGQRLNELSWAKV-EVKTELA 351
           M+DIA+L+AEEYERRVK  +K   GE   +I  VSC SV  +R+     +K+ + K EL 
Sbjct: 1   MSDIAMLVAEEYERRVKHSRKAAGGEGDMEINRVSCASVRFRRIK----SKIGKEKMELL 56

Query: 352 KRVLDPKSSFGLAACNGLFSA 414
           K  L+PKSS GLAA +G FSA
Sbjct: 57  KMALEPKSSMGLAASDGFFSA 77


>ref|XP_002335471.1| predicted protein [Populus trichocarpa]
           gi|224096243|ref|XP_002310589.1| predicted protein
           [Populus trichocarpa] gi|222834230|gb|EEE72707.1|
           predicted protein [Populus trichocarpa]
           gi|222853492|gb|EEE91039.1| predicted protein [Populus
           trichocarpa]
          Length = 77

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 42/81 (51%), Positives = 52/81 (64%), Gaps = 7/81 (8%)
 Frame = +1

Query: 193 MADIAILIAEEYERRVKEYQK---GE---DITLVSCVSVMGQRL-NELSWAKVEVKTELA 351
           M+DIAIL+AEEYERRVK  +K   GE   +I  VSC SV+ Q + N +     + K EL 
Sbjct: 1   MSDIAILVAEEYERRVKNSRKAAGGEGDMEINWVSCASVLAQSIKNNIG----KEKMELL 56

Query: 352 KRVLDPKSSFGLAACNGLFSA 414
           K VL+P+S   LAA NG FSA
Sbjct: 57  KLVLEPRSQVSLAASNGFFSA 77


>ref|XP_003538507.1| PREDICTED: uncharacterized protein LOC100306576 [Glycine max]
           gi|255628931|gb|ACU14810.1| unknown [Glycine max]
          Length = 77

 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 40/83 (48%), Positives = 51/83 (61%), Gaps = 9/83 (10%)
 Frame = +1

Query: 193 MADIAILIAEEYERRVKEYQKGEDITLVSCVSVMGQRLNELSWA--------KVEV-KTE 345
           M+DIA+L+AEEYERR K Y+KG         +V  + LN +S A        K+EV K E
Sbjct: 1   MSDIAMLVAEEYERRTKHYRKG------GAGAVQERNLNVVSCANSFLVLKEKIEVQKKE 54

Query: 346 LAKRVLDPKSSFGLAACNGLFSA 414
           L K VL+PK+ F +AA N LFSA
Sbjct: 55  LVKWVLEPKTQFAIAASNSLFSA 77


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