BLASTX nr result

ID: Coptis24_contig00014116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014116
         (606 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141732.1| PREDICTED: uncharacterized protein LOC101211...    83   3e-14
ref|XP_004155895.1| PREDICTED: uncharacterized LOC101211901 [Cuc...    82   6e-14
ref|XP_002331222.1| predicted protein [Populus trichocarpa] gi|2...    80   4e-13
emb|CBI35799.3| unnamed protein product [Vitis vinifera]               77   2e-12
ref|XP_002265894.1| PREDICTED: uncharacterized protein LOC100258...    77   2e-12

>ref|XP_004141732.1| PREDICTED: uncharacterized protein LOC101211901 [Cucumis sativus]
          Length = 144

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 44/76 (57%), Positives = 55/76 (72%), Gaps = 5/76 (6%)
 Frame = -3

Query: 457 FKPRNKVFLL-PTNQPCK----LFIRSSIENKVFEDHSLGIICYKNESGEIICEGYDEGP 293
           FKP  +++++ PT  P K    L IRSS++NKVFED S G+ICY +E+GEIICEGYDEGP
Sbjct: 25  FKPITRIWMVKPTRLPLKNSFSLRIRSSMKNKVFEDQSEGVICYADENGEIICEGYDEGP 84

Query: 292 RFHKQQVERKTYHHRE 245
           RFH Q V  K  + RE
Sbjct: 85  RFH-QNVSEKGNNQRE 99


>ref|XP_004155895.1| PREDICTED: uncharacterized LOC101211901 [Cucumis sativus]
          Length = 145

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 41/69 (59%), Positives = 52/69 (75%), Gaps = 5/69 (7%)
 Frame = -3

Query: 457 FKPRNKVFLL-PTNQPCK----LFIRSSIENKVFEDHSLGIICYKNESGEIICEGYDEGP 293
           FKP  +++++ PT  P K    L IRSS++NKVFED S G+ICY +E+GEIICEGYDEGP
Sbjct: 26  FKPITRIWMVKPTRLPLKNSFSLRIRSSMKNKVFEDQSEGVICYADENGEIICEGYDEGP 85

Query: 292 RFHKQQVER 266
           RFH+   ER
Sbjct: 86  RFHQNVSER 94


>ref|XP_002331222.1| predicted protein [Populus trichocarpa] gi|222873343|gb|EEF10474.1|
           predicted protein [Populus trichocarpa]
          Length = 140

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 45/98 (45%), Positives = 66/98 (67%), Gaps = 10/98 (10%)
 Frame = -3

Query: 508 MALGC--SYHGIVVHGSHIFKPRNKVFLLPTNQ---PCK----LFIRSSIENK-VFEDHS 359
           MA+ C  S H +V     + KP +++ +L  N+   P K    L +RSS++ K VFE+ +
Sbjct: 1   MAVACLSSPHILVQKSGPVIKPASRILMLQRNRSHVPLKKAPTLPVRSSLQAKLVFENRA 60

Query: 358 LGIICYKNESGEIICEGYDEGPRFHKQQVERKTYHHRE 245
            GI+CY++ESGEIICEG+DEGPRFH QQ++  +YH R+
Sbjct: 61  EGIVCYRDESGEIICEGFDEGPRFH-QQLQCSSYHPRD 97


>emb|CBI35799.3| unnamed protein product [Vitis vinifera]
          Length = 105

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 33/54 (61%), Positives = 43/54 (79%)
 Frame = -3

Query: 406 LFIRSSIENKVFEDHSLGIICYKNESGEIICEGYDEGPRFHKQQVERKTYHHRE 245
           L I+SS  NKVFED S GI+CY+++ GEI+CEGYDEGPR H  +++RK YH R+
Sbjct: 16  LEIKSSFRNKVFEDQSKGIVCYRDDKGEIVCEGYDEGPRLH-HELQRKNYHPRD 68


>ref|XP_002265894.1| PREDICTED: uncharacterized protein LOC100258290 [Vitis vinifera]
           gi|147793049|emb|CAN62135.1| hypothetical protein
           VITISV_043719 [Vitis vinifera]
          Length = 133

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 33/54 (61%), Positives = 43/54 (79%)
 Frame = -3

Query: 406 LFIRSSIENKVFEDHSLGIICYKNESGEIICEGYDEGPRFHKQQVERKTYHHRE 245
           L I+SS  NKVFED S GI+CY+++ GEI+CEGYDEGPR H  +++RK YH R+
Sbjct: 44  LEIKSSFRNKVFEDQSKGIVCYRDDKGEIVCEGYDEGPRLH-HELQRKNYHPRD 96


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