BLASTX nr result

ID: Coptis24_contig00014044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014044
         (828 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38414.1| unknown [Lotus japonicus]                              184   3e-44
ref|XP_002320843.1| predicted protein [Populus trichocarpa] gi|2...   182   1e-43
gb|ABK95729.1| unknown [Populus trichocarpa]                          182   1e-43
ref|XP_002302615.1| predicted protein [Populus trichocarpa] gi|2...   181   1e-43
emb|CAN64486.1| hypothetical protein VITISV_035039 [Vitis vinifera]   179   9e-43

>gb|AFK38414.1| unknown [Lotus japonicus]
          Length = 163

 Score =  184 bits (466), Expect = 3e-44
 Identities = 91/119 (76%), Positives = 103/119 (86%)
 Frame = +3

Query: 267 NIKHFSDSRRFSPLQIRAXXXXXXXXXXXXLFSDIKEKWEAVENKSTVLVYGGGAVVAIW 446
           ++KHFS+SR+ S LQ RA            L SD+KEKW+AVENKSTV++YGGGA+VA+W
Sbjct: 45  SLKHFSESRKPSLLQTRASSDETSSVDTNELISDLKEKWDAVENKSTVIIYGGGALVAVW 104

Query: 447 LSSIVVGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIESLKKKIAGTE 623
           LSSI+VGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIES+KKKIAGTE
Sbjct: 105 LSSILVGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIESIKKKIAGTE 163


>ref|XP_002320843.1| predicted protein [Populus trichocarpa] gi|222861616|gb|EEE99158.1|
           predicted protein [Populus trichocarpa]
          Length = 151

 Score =  182 bits (461), Expect = 1e-43
 Identities = 87/114 (76%), Positives = 100/114 (87%)
 Frame = +3

Query: 282 SDSRRFSPLQIRAXXXXXXXXXXXXLFSDIKEKWEAVENKSTVLVYGGGAVVAIWLSSIV 461
           S+SRRF+P Q RA            +F+D+KEKW+AVENKSTV++YGGGAVVA+WLSSI+
Sbjct: 38  SESRRFAPFQTRASSSEESPVDANEIFTDLKEKWDAVENKSTVIIYGGGAVVAVWLSSIL 97

Query: 462 VGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIESLKKKIAGTE 623
           +GA+NSVPLLPKI+ELVGLGYTGWFVYRYLLFKSSRKELATDIESLKKKIAGTE
Sbjct: 98  IGAVNSVPLLPKILELVGLGYTGWFVYRYLLFKSSRKELATDIESLKKKIAGTE 151


>gb|ABK95729.1| unknown [Populus trichocarpa]
          Length = 164

 Score =  182 bits (461), Expect = 1e-43
 Identities = 87/114 (76%), Positives = 100/114 (87%)
 Frame = +3

Query: 282 SDSRRFSPLQIRAXXXXXXXXXXXXLFSDIKEKWEAVENKSTVLVYGGGAVVAIWLSSIV 461
           S+SRRF+P Q RA            +F+D+KEKW+AVENKSTV++YGGGAVVA+WLSSI+
Sbjct: 51  SESRRFAPFQTRASSSEESPVDANEIFTDLKEKWDAVENKSTVIIYGGGAVVAVWLSSIL 110

Query: 462 VGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIESLKKKIAGTE 623
           +GA+NSVPLLPKI+ELVGLGYTGWFVYRYLLFKSSRKELATDIESLKKKIAGTE
Sbjct: 111 IGAVNSVPLLPKILELVGLGYTGWFVYRYLLFKSSRKELATDIESLKKKIAGTE 164


>ref|XP_002302615.1| predicted protein [Populus trichocarpa] gi|222844341|gb|EEE81888.1|
           predicted protein [Populus trichocarpa]
          Length = 155

 Score =  181 bits (460), Expect = 1e-43
 Identities = 91/120 (75%), Positives = 102/120 (85%), Gaps = 2/120 (1%)
 Frame = +3

Query: 270 IKH--FSDSRRFSPLQIRAXXXXXXXXXXXXLFSDIKEKWEAVENKSTVLVYGGGAVVAI 443
           IKH   S+S RF+PLQIRA            +F+D+KEKW+AVENKSTV++YGGGA+V +
Sbjct: 36  IKHVSLSESHRFAPLQIRASSSEESSVDANEVFTDLKEKWDAVENKSTVILYGGGAIVFV 95

Query: 444 WLSSIVVGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIESLKKKIAGTE 623
           WLSSIV+GAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIE LKKKIAGTE
Sbjct: 96  WLSSIVIGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEVLKKKIAGTE 155


>emb|CAN64486.1| hypothetical protein VITISV_035039 [Vitis vinifera]
          Length = 161

 Score =  179 bits (453), Expect = 9e-43
 Identities = 87/119 (73%), Positives = 101/119 (84%)
 Frame = +3

Query: 267 NIKHFSDSRRFSPLQIRAXXXXXXXXXXXXLFSDIKEKWEAVENKSTVLVYGGGAVVAIW 446
           ++K FSDS RFS LQI+A            LFSD+ E+W+A+ENKSTV +YGGGA+VA+W
Sbjct: 43  SLKLFSDSNRFSSLQIKASSDESGPVDAGELFSDLMERWDALENKSTVFIYGGGAIVAVW 102

Query: 447 LSSIVVGAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIESLKKKIAGTE 623
           LSSI+V AINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIE+LKKKI+G+E
Sbjct: 103 LSSIIVSAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKISGSE 161


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