BLASTX nr result

ID: Coptis24_contig00014040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014040
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277673.1| PREDICTED: homeobox-leucine zipper protein R...    77   1e-17
ref|XP_002518976.1| homeobox protein, putative [Ricinus communis...    79   2e-17
ref|XP_004172445.1| PREDICTED: homeobox-leucine zipper protein R...    77   3e-17
ref|XP_002326544.1| predicted protein [Populus trichocarpa] gi|2...    78   2e-16
ref|XP_002303433.1| predicted protein [Populus trichocarpa] gi|2...    76   1e-15

>ref|XP_002277673.1| PREDICTED: homeobox-leucine zipper protein ROC3 [Vitis vinifera]
           gi|147777871|emb|CAN60291.1| hypothetical protein
           VITISV_032685 [Vitis vinifera]
           gi|297742043|emb|CBI33830.3| unnamed protein product
           [Vitis vinifera]
          Length = 798

 Score = 77.0 bits (188), Expect(2) = 1e-17
 Identities = 35/47 (74%), Positives = 39/47 (82%)
 Frame = +3

Query: 3   MYAELQFLSSLVPTREAHFLCYCH*NVEEGTWAIVDFPFDSFHESFQ 143
           MYAELQ LS LVPTRE HFL YC  NV+EGTWAIVDFP DSF+++ Q
Sbjct: 396 MYAELQVLSPLVPTRETHFLRYCQQNVDEGTWAIVDFPIDSFNDNLQ 442



 Score = 37.7 bits (86), Expect(2) = 1e-17
 Identities = 17/20 (85%), Positives = 17/20 (85%)
 Frame = +2

Query: 158 RYRRRPYG*IKQDMPNGYSR 217
           RYRRRP G I QDMPNGYSR
Sbjct: 447 RYRRRPSGCIIQDMPNGYSR 466


>ref|XP_002518976.1| homeobox protein, putative [Ricinus communis]
           gi|223541963|gb|EEF43509.1| homeobox protein, putative
           [Ricinus communis]
          Length = 810

 Score = 79.0 bits (193), Expect(2) = 2e-17
 Identities = 37/47 (78%), Positives = 39/47 (82%)
 Frame = +3

Query: 3   MYAELQFLSSLVPTREAHFLCYCH*NVEEGTWAIVDFPFDSFHESFQ 143
           M+AELQ LS LVPTREA+FL YC  NVEEGTWAIVDFP DSFHE  Q
Sbjct: 398 MHAELQVLSPLVPTREAYFLRYCQQNVEEGTWAIVDFPIDSFHEDIQ 444



 Score = 35.4 bits (80), Expect(2) = 2e-17
 Identities = 15/19 (78%), Positives = 16/19 (84%)
 Frame = +2

Query: 161 YRRRPYG*IKQDMPNGYSR 217
           YRRRP G + QDMPNGYSR
Sbjct: 450 YRRRPSGCVIQDMPNGYSR 468


>ref|XP_004172445.1| PREDICTED: homeobox-leucine zipper protein ROC3-like [Cucumis
           sativus]
          Length = 812

 Score = 76.6 bits (187), Expect(2) = 3e-17
 Identities = 34/48 (70%), Positives = 38/48 (79%)
 Frame = +3

Query: 3   MYAELQFLSSLVPTREAHFLCYCH*NVEEGTWAIVDFPFDSFHESFQH 146
           MYAELQ LS LVPTREAHFL  C  N +EG+W +VDFP DSFH+S QH
Sbjct: 410 MYAELQTLSPLVPTREAHFLRCCQQNADEGSWTVVDFPIDSFHDSLQH 457



 Score = 36.6 bits (83), Expect(2) = 3e-17
 Identities = 16/20 (80%), Positives = 17/20 (85%)
 Frame = +2

Query: 158 RYRRRPYG*IKQDMPNGYSR 217
           RYRR+P G I QDMPNGYSR
Sbjct: 461 RYRRKPSGCIIQDMPNGYSR 480


>ref|XP_002326544.1| predicted protein [Populus trichocarpa] gi|222833866|gb|EEE72343.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score = 77.8 bits (190), Expect(2) = 2e-16
 Identities = 35/47 (74%), Positives = 39/47 (82%)
 Frame = +3

Query: 3   MYAELQFLSSLVPTREAHFLCYCH*NVEEGTWAIVDFPFDSFHESFQ 143
           MYAELQ LS LVPTRE HFL +C  NVEEGTWAIVDFP DSFH++ +
Sbjct: 317 MYAELQVLSPLVPTRETHFLRFCQQNVEEGTWAIVDFPLDSFHDNIR 363



 Score = 33.1 bits (74), Expect(2) = 2e-16
 Identities = 13/19 (68%), Positives = 16/19 (84%)
 Frame = +2

Query: 161 YRRRPYG*IKQDMPNGYSR 217
           YRRRP G + QD+PNGYS+
Sbjct: 369 YRRRPSGCVIQDLPNGYSK 387


>ref|XP_002303433.1| predicted protein [Populus trichocarpa] gi|222840865|gb|EEE78412.1|
           predicted protein [Populus trichocarpa]
          Length = 774

 Score = 75.9 bits (185), Expect(2) = 1e-15
 Identities = 34/47 (72%), Positives = 38/47 (80%)
 Frame = +3

Query: 3   MYAELQFLSSLVPTREAHFLCYCH*NVEEGTWAIVDFPFDSFHESFQ 143
           MYAELQ LS LVPTRE +FL +CH NVEEGTWAIVDFP D  H++ Q
Sbjct: 397 MYAELQVLSPLVPTRETYFLRFCHQNVEEGTWAIVDFPLDRLHDNIQ 443



 Score = 32.3 bits (72), Expect(2) = 1e-15
 Identities = 13/19 (68%), Positives = 15/19 (78%)
 Frame = +2

Query: 161 YRRRPYG*IKQDMPNGYSR 217
           Y+R P G + QDMPNGYSR
Sbjct: 449 YKRHPSGCVIQDMPNGYSR 467


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