BLASTX nr result
ID: Coptis24_contig00014040
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00014040 (551 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277673.1| PREDICTED: homeobox-leucine zipper protein R... 77 1e-17 ref|XP_002518976.1| homeobox protein, putative [Ricinus communis... 79 2e-17 ref|XP_004172445.1| PREDICTED: homeobox-leucine zipper protein R... 77 3e-17 ref|XP_002326544.1| predicted protein [Populus trichocarpa] gi|2... 78 2e-16 ref|XP_002303433.1| predicted protein [Populus trichocarpa] gi|2... 76 1e-15 >ref|XP_002277673.1| PREDICTED: homeobox-leucine zipper protein ROC3 [Vitis vinifera] gi|147777871|emb|CAN60291.1| hypothetical protein VITISV_032685 [Vitis vinifera] gi|297742043|emb|CBI33830.3| unnamed protein product [Vitis vinifera] Length = 798 Score = 77.0 bits (188), Expect(2) = 1e-17 Identities = 35/47 (74%), Positives = 39/47 (82%) Frame = +3 Query: 3 MYAELQFLSSLVPTREAHFLCYCH*NVEEGTWAIVDFPFDSFHESFQ 143 MYAELQ LS LVPTRE HFL YC NV+EGTWAIVDFP DSF+++ Q Sbjct: 396 MYAELQVLSPLVPTRETHFLRYCQQNVDEGTWAIVDFPIDSFNDNLQ 442 Score = 37.7 bits (86), Expect(2) = 1e-17 Identities = 17/20 (85%), Positives = 17/20 (85%) Frame = +2 Query: 158 RYRRRPYG*IKQDMPNGYSR 217 RYRRRP G I QDMPNGYSR Sbjct: 447 RYRRRPSGCIIQDMPNGYSR 466 >ref|XP_002518976.1| homeobox protein, putative [Ricinus communis] gi|223541963|gb|EEF43509.1| homeobox protein, putative [Ricinus communis] Length = 810 Score = 79.0 bits (193), Expect(2) = 2e-17 Identities = 37/47 (78%), Positives = 39/47 (82%) Frame = +3 Query: 3 MYAELQFLSSLVPTREAHFLCYCH*NVEEGTWAIVDFPFDSFHESFQ 143 M+AELQ LS LVPTREA+FL YC NVEEGTWAIVDFP DSFHE Q Sbjct: 398 MHAELQVLSPLVPTREAYFLRYCQQNVEEGTWAIVDFPIDSFHEDIQ 444 Score = 35.4 bits (80), Expect(2) = 2e-17 Identities = 15/19 (78%), Positives = 16/19 (84%) Frame = +2 Query: 161 YRRRPYG*IKQDMPNGYSR 217 YRRRP G + QDMPNGYSR Sbjct: 450 YRRRPSGCVIQDMPNGYSR 468 >ref|XP_004172445.1| PREDICTED: homeobox-leucine zipper protein ROC3-like [Cucumis sativus] Length = 812 Score = 76.6 bits (187), Expect(2) = 3e-17 Identities = 34/48 (70%), Positives = 38/48 (79%) Frame = +3 Query: 3 MYAELQFLSSLVPTREAHFLCYCH*NVEEGTWAIVDFPFDSFHESFQH 146 MYAELQ LS LVPTREAHFL C N +EG+W +VDFP DSFH+S QH Sbjct: 410 MYAELQTLSPLVPTREAHFLRCCQQNADEGSWTVVDFPIDSFHDSLQH 457 Score = 36.6 bits (83), Expect(2) = 3e-17 Identities = 16/20 (80%), Positives = 17/20 (85%) Frame = +2 Query: 158 RYRRRPYG*IKQDMPNGYSR 217 RYRR+P G I QDMPNGYSR Sbjct: 461 RYRRKPSGCIIQDMPNGYSR 480 >ref|XP_002326544.1| predicted protein [Populus trichocarpa] gi|222833866|gb|EEE72343.1| predicted protein [Populus trichocarpa] Length = 726 Score = 77.8 bits (190), Expect(2) = 2e-16 Identities = 35/47 (74%), Positives = 39/47 (82%) Frame = +3 Query: 3 MYAELQFLSSLVPTREAHFLCYCH*NVEEGTWAIVDFPFDSFHESFQ 143 MYAELQ LS LVPTRE HFL +C NVEEGTWAIVDFP DSFH++ + Sbjct: 317 MYAELQVLSPLVPTRETHFLRFCQQNVEEGTWAIVDFPLDSFHDNIR 363 Score = 33.1 bits (74), Expect(2) = 2e-16 Identities = 13/19 (68%), Positives = 16/19 (84%) Frame = +2 Query: 161 YRRRPYG*IKQDMPNGYSR 217 YRRRP G + QD+PNGYS+ Sbjct: 369 YRRRPSGCVIQDLPNGYSK 387 >ref|XP_002303433.1| predicted protein [Populus trichocarpa] gi|222840865|gb|EEE78412.1| predicted protein [Populus trichocarpa] Length = 774 Score = 75.9 bits (185), Expect(2) = 1e-15 Identities = 34/47 (72%), Positives = 38/47 (80%) Frame = +3 Query: 3 MYAELQFLSSLVPTREAHFLCYCH*NVEEGTWAIVDFPFDSFHESFQ 143 MYAELQ LS LVPTRE +FL +CH NVEEGTWAIVDFP D H++ Q Sbjct: 397 MYAELQVLSPLVPTRETYFLRFCHQNVEEGTWAIVDFPLDRLHDNIQ 443 Score = 32.3 bits (72), Expect(2) = 1e-15 Identities = 13/19 (68%), Positives = 15/19 (78%) Frame = +2 Query: 161 YRRRPYG*IKQDMPNGYSR 217 Y+R P G + QDMPNGYSR Sbjct: 449 YKRHPSGCVIQDMPNGYSR 467