BLASTX nr result

ID: Coptis24_contig00014036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014036
         (668 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29706.3| unnamed protein product [Vitis vinifera]               97   4e-18
ref|XP_002262918.1| PREDICTED: uncharacterized protein LOC100249...    97   4e-18
gb|AFK48331.1| unknown [Lotus japonicus]                               94   2e-17
ref|XP_002328776.1| predicted protein [Populus trichocarpa] gi|2...    91   3e-16
ref|XP_002526452.1| yth domain-containing protein, putative [Ric...    90   3e-16

>emb|CBI29706.3| unnamed protein product [Vitis vinifera]
          Length = 708

 Score = 96.7 bits (239), Expect = 4e-18
 Identities = 54/111 (48%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
 Frame = -2

Query: 667 NNDNKPVTYTRDTQEVGLKQGLEMLSIFKTYPAMTSMLDDYKFYEDQQKSLQARKGSKEE 488
           +N+N+ VTYTRDTQE+GLKQG+EML IFK Y A TSM DD+ FYE+++KSL AR+ SK  
Sbjct: 570 SNENRSVTYTRDTQEIGLKQGVEMLKIFKNYSARTSMFDDFNFYENREKSLHARRSSKPP 629

Query: 487 PSNYDN--HKTEFLERDFEAGLRKAEEAPMTVRKVSEYTSLATLARNLSLN 341
           P +        + L +      RK EE   T R   +  SL  L +NLSL+
Sbjct: 630 PPSQMEIYGSGDDLPKHLHGEERKTEEPARTSRS-HDPKSLINLTKNLSLS 679


>ref|XP_002262918.1| PREDICTED: uncharacterized protein LOC100249242 [Vitis vinifera]
          Length = 608

 Score = 96.7 bits (239), Expect = 4e-18
 Identities = 54/111 (48%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
 Frame = -2

Query: 667 NNDNKPVTYTRDTQEVGLKQGLEMLSIFKTYPAMTSMLDDYKFYEDQQKSLQARKGSKEE 488
           +N+N+ VTYTRDTQE+GLKQG+EML IFK Y A TSM DD+ FYE+++KSL AR+ SK  
Sbjct: 470 SNENRSVTYTRDTQEIGLKQGVEMLKIFKNYSARTSMFDDFNFYENREKSLHARRSSKPP 529

Query: 487 PSNYDN--HKTEFLERDFEAGLRKAEEAPMTVRKVSEYTSLATLARNLSLN 341
           P +        + L +      RK EE   T R   +  SL  L +NLSL+
Sbjct: 530 PPSQMEIYGSGDDLPKHLHGEERKTEEPARTSRS-HDPKSLINLTKNLSLS 579


>gb|AFK48331.1| unknown [Lotus japonicus]
          Length = 436

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 52/121 (42%), Positives = 74/121 (61%), Gaps = 8/121 (6%)
 Frame = -2

Query: 667 NNDNKPVTYTRDTQEVGLKQGLEMLSIFKTYPAMTSMLDDYKFYEDQQKSLQARKGSKE- 491
           NNDN+PVT++RDTQE+GLK+GLEMLSIFK+Y A TS+LDD+ FYE+++K  +++K +K  
Sbjct: 302 NNDNRPVTFSRDTQEIGLKEGLEMLSIFKSYSAKTSLLDDFDFYENREKLFRSQKSTKHT 361

Query: 490 -------EPSNYDNHKTEFLERDFEAGLRKAEEAPMTVRKVSEYTSLATLARNLSLNPKS 332
                     NY  +         EA  +K E   M     ++  +L  L +NLSL+P  
Sbjct: 362 SPKPQVYNSGNYHVYNNGNYHNTVEAREKKIE---MQSSGGTKQFNLIKLTKNLSLSPSE 418

Query: 331 T 329
           T
Sbjct: 419 T 419


>ref|XP_002328776.1| predicted protein [Populus trichocarpa] gi|222839074|gb|EEE77425.1|
           predicted protein [Populus trichocarpa]
          Length = 350

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 47/109 (43%), Positives = 68/109 (62%)
 Frame = -2

Query: 667 NNDNKPVTYTRDTQEVGLKQGLEMLSIFKTYPAMTSMLDDYKFYEDQQKSLQARKGSKEE 488
           NND   VT++RDTQE+GL++GLEML+IFK+Y A TSMLDD+ FYE+++KSL  +K +K  
Sbjct: 220 NNDGHSVTFSRDTQEIGLEKGLEMLNIFKSYSAKTSMLDDFNFYENREKSLNTKKSNKPA 279

Query: 487 PSNYDNHKTEFLERDFEAGLRKAEEAPMTVRKVSEYTSLATLARNLSLN 341
               +  +     +   A   K  E     +K +  ++L  L +NLSLN
Sbjct: 280 TLRMEIFENSDFPK-HTAAEEKISEDDSRAKKTTNPSTLINLTKNLSLN 327


>ref|XP_002526452.1| yth domain-containing protein, putative [Ricinus communis]
           gi|223534232|gb|EEF35947.1| yth domain-containing
           protein, putative [Ricinus communis]
          Length = 582

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 49/109 (44%), Positives = 71/109 (65%)
 Frame = -2

Query: 667 NNDNKPVTYTRDTQEVGLKQGLEMLSIFKTYPAMTSMLDDYKFYEDQQKSLQARKGSKEE 488
           NND +PVT++RDTQE+G +QGLEML+IFK Y +  S+LDD+ FYE+++ S+  RK +K  
Sbjct: 453 NNDKRPVTFSRDTQEIGFEQGLEMLNIFKGYSSKASLLDDFNFYENRETSVD-RKSNKLA 511

Query: 487 PSNYDNHKTEFLERDFEAGLRKAEEAPMTVRKVSEYTSLATLARNLSLN 341
               + +      +  ++G RK EE   T +K S  +SL  L +NLSLN
Sbjct: 512 TLRMEINNNGDFPKHPKSGERKHEEESWT-KKTSNPSSLINLTKNLSLN 559


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