BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00014002
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, ...   192   2e-47
ref|XP_002265349.2| PREDICTED: cleavage stimulation factor subun...   191   9e-47
emb|CBI15329.3| unnamed protein product [Vitis vinifera]              191   9e-47
ref|XP_003528235.1| PREDICTED: cleavage stimulation factor subun...   187   7e-46
ref|XP_004137447.1| PREDICTED: LOW QUALITY PROTEIN: cleavage sti...   187   9e-46

>ref|XP_002514630.1| Cleavage stimulation factor 50 kDa subunit, putative [Ricinus
           communis] gi|223546234|gb|EEF47736.1| Cleavage
           stimulation factor 50 kDa subunit, putative [Ricinus
           communis]
          Length = 435

 Score =  192 bits (489), Expect = 2e-47
 Identities = 87/110 (79%), Positives = 101/110 (91%)
 Frame = -2

Query: 550 SFTKDQRFILSSGKDSTVKLWEVRNGRLVKQYLGVTHTQLRCQAVFNETEEFVLSIVEPN 371
           +FTKDQRF+LS GKDS++KLWEV +GRLVKQY+G THTQLRCQAVFNETEEFV+SI EP+
Sbjct: 323 TFTKDQRFVLSCGKDSSIKLWEVGSGRLVKQYIGATHTQLRCQAVFNETEEFVISIDEPS 382

Query: 370 NEIVIWGALTSEKVARFPSNHIGAPRWLEHSPTEATFISCGMDRSVRYWE 221
           NEI+IW ALT+EKVAR+PSNH GAPRW+EHSP EA FISCG DRSVR+W+
Sbjct: 383 NEIIIWDALTAEKVARWPSNHNGAPRWIEHSPVEAAFISCGTDRSVRFWK 432


>ref|XP_002265349.2| PREDICTED: cleavage stimulation factor subunit 1-like [Vitis
           vinifera]
          Length = 440

 Score =  191 bits (484), Expect = 9e-47
 Identities = 88/110 (80%), Positives = 99/110 (90%)
 Frame = -2

Query: 550 SFTKDQRFILSSGKDSTVKLWEVRNGRLVKQYLGVTHTQLRCQAVFNETEEFVLSIVEPN 371
           SFTKDQRF+LS GKDS+VKLWE+ +G+LVKQYLG  HTQLRCQAVFNETEEFVLSI E +
Sbjct: 328 SFTKDQRFVLSCGKDSSVKLWEIGSGKLVKQYLGAAHTQLRCQAVFNETEEFVLSIDEQS 387

Query: 370 NEIVIWGALTSEKVARFPSNHIGAPRWLEHSPTEATFISCGMDRSVRYWE 221
           NEIV+W ALT+E VAR PSNHIGAPRWLEHSPTEA F+SCG DRSVR+W+
Sbjct: 388 NEIVVWDALTAEIVARLPSNHIGAPRWLEHSPTEAAFVSCGTDRSVRFWK 437


>emb|CBI15329.3| unnamed protein product [Vitis vinifera]
          Length = 484

 Score =  191 bits (484), Expect = 9e-47
 Identities = 88/110 (80%), Positives = 99/110 (90%)
 Frame = -2

Query: 550 SFTKDQRFILSSGKDSTVKLWEVRNGRLVKQYLGVTHTQLRCQAVFNETEEFVLSIVEPN 371
           SFTKDQRF+LS GKDS+VKLWE+ +G+LVKQYLG  HTQLRCQAVFNETEEFVLSI E +
Sbjct: 372 SFTKDQRFVLSCGKDSSVKLWEIGSGKLVKQYLGAAHTQLRCQAVFNETEEFVLSIDEQS 431

Query: 370 NEIVIWGALTSEKVARFPSNHIGAPRWLEHSPTEATFISCGMDRSVRYWE 221
           NEIV+W ALT+E VAR PSNHIGAPRWLEHSPTEA F+SCG DRSVR+W+
Sbjct: 432 NEIVVWDALTAEIVARLPSNHIGAPRWLEHSPTEAAFVSCGTDRSVRFWK 481


>ref|XP_003528235.1| PREDICTED: cleavage stimulation factor subunit 1-like [Glycine max]
          Length = 425

 Score =  187 bits (476), Expect = 7e-46
 Identities = 85/109 (77%), Positives = 99/109 (90%)
 Frame = -2

Query: 547 FTKDQRFILSSGKDSTVKLWEVRNGRLVKQYLGVTHTQLRCQAVFNETEEFVLSIVEPNN 368
           FTKDQRF+LS GKDST+KLWEV +GRLVKQYLG  HTQLRCQA+FNETEEF+LSI E +N
Sbjct: 314 FTKDQRFVLSCGKDSTLKLWEVGSGRLVKQYLGAIHTQLRCQAIFNETEEFILSIDELSN 373

Query: 367 EIVIWGALTSEKVARFPSNHIGAPRWLEHSPTEATFISCGMDRSVRYWE 221
           EIVIW A+T+EKVA++PSNH+GAPRWLEHSP E+ FISCG DRSVR+W+
Sbjct: 374 EIVIWDAMTTEKVAKWPSNHVGAPRWLEHSPIESAFISCGTDRSVRFWK 422


>ref|XP_004137447.1| PREDICTED: LOW QUALITY PROTEIN: cleavage stimulation factor subunit
           1-like [Cucumis sativus]
          Length = 435

 Score =  187 bits (475), Expect = 9e-46
 Identities = 83/109 (76%), Positives = 100/109 (91%)
 Frame = -2

Query: 547 FTKDQRFILSSGKDSTVKLWEVRNGRLVKQYLGVTHTQLRCQAVFNETEEFVLSIVEPNN 368
           FTKD+R++LS GKDS+VKLW+V  GRLVKQY+G TH QLRCQAVFN+TEEFVLSI EP+N
Sbjct: 324 FTKDERYVLSCGKDSSVKLWDVGTGRLVKQYVGATHIQLRCQAVFNDTEEFVLSIDEPSN 383

Query: 367 EIVIWGALTSEKVARFPSNHIGAPRWLEHSPTEATFISCGMDRSVRYWE 221
           EIVIW ALT+E+VAR+PSNH+GAPRWLEHSPTE+ FISCG D+S+R+W+
Sbjct: 384 EIVIWDALTAERVARWPSNHVGAPRWLEHSPTESAFISCGTDKSIRFWK 432