BLASTX nr result

ID: Coptis24_contig00013992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013992
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270524.1| PREDICTED: U-box domain-containing protein 1...   145   3e-33
ref|XP_003556245.1| PREDICTED: U-box domain-containing protein 1...   140   1e-31
ref|XP_003535520.1| PREDICTED: U-box domain-containing protein 1...   137   7e-31
ref|XP_002315320.1| predicted protein [Populus trichocarpa] gi|2...   137   7e-31
ref|XP_002311996.1| predicted protein [Populus trichocarpa] gi|2...   137   9e-31

>ref|XP_002270524.1| PREDICTED: U-box domain-containing protein 14 [Vitis vinifera]
          Length = 628

 Score =  145 bits (367), Expect = 3e-33
 Identities = 74/84 (88%), Positives = 79/84 (94%)
 Frame = +3

Query: 165 SPRGKKDAATAIFNLLIYQGNKVRAVRAGIVVPLMRLLTDAAGGMVDEALAILAILASHQ 344
           +PRGKKDAATAIFNL IYQGNKVRAVRAGIVVPLMR L DA GGMVDEALAILAILASHQ
Sbjct: 481 TPRGKKDAATAIFNLAIYQGNKVRAVRAGIVVPLMRFLKDAGGGMVDEALAILAILASHQ 540

Query: 345 EGRVAIGQAEPTPVLVEVMRTGSP 416
           EG++AIGQAEP PVLVEV++TGSP
Sbjct: 541 EGKLAIGQAEPFPVLVEVIKTGSP 564


>ref|XP_003556245.1| PREDICTED: U-box domain-containing protein 14-like [Glycine max]
          Length = 631

 Score =  140 bits (353), Expect = 1e-31
 Identities = 70/84 (83%), Positives = 77/84 (91%)
 Frame = +3

Query: 165 SPRGKKDAATAIFNLLIYQGNKVRAVRAGIVVPLMRLLTDAAGGMVDEALAILAILASHQ 344
           +PRGKKDAATAIFNL IYQGNK RAV+AGIVVPL++ L DA GGMVDEALAI+AILASH 
Sbjct: 481 TPRGKKDAATAIFNLSIYQGNKARAVKAGIVVPLIQFLKDAGGGMVDEALAIMAILASHH 540

Query: 345 EGRVAIGQAEPTPVLVEVMRTGSP 416
           EGRVAIGQAEP P+LVEV+RTGSP
Sbjct: 541 EGRVAIGQAEPIPILVEVIRTGSP 564


>ref|XP_003535520.1| PREDICTED: U-box domain-containing protein 14-like [Glycine max]
          Length = 632

 Score =  137 bits (346), Expect = 7e-31
 Identities = 69/84 (82%), Positives = 76/84 (90%)
 Frame = +3

Query: 165 SPRGKKDAATAIFNLLIYQGNKVRAVRAGIVVPLMRLLTDAAGGMVDEALAILAILASHQ 344
           +PRGKKDAATAIFNL IYQGNK RAV+AGIV PL++ LTDA GGMVDEALAI+AILASH 
Sbjct: 482 TPRGKKDAATAIFNLSIYQGNKARAVKAGIVAPLIQFLTDAGGGMVDEALAIMAILASHH 541

Query: 345 EGRVAIGQAEPTPVLVEVMRTGSP 416
           EGRVAIGQAEP  +LVEV+RTGSP
Sbjct: 542 EGRVAIGQAEPIHILVEVIRTGSP 565


>ref|XP_002315320.1| predicted protein [Populus trichocarpa] gi|222864360|gb|EEF01491.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score =  137 bits (346), Expect = 7e-31
 Identities = 70/84 (83%), Positives = 76/84 (90%)
 Frame = +3

Query: 165 SPRGKKDAATAIFNLLIYQGNKVRAVRAGIVVPLMRLLTDAAGGMVDEALAILAILASHQ 344
           +PRGKKDAATAIFNL IYQGNK RAV+AGIV PLMRLL DA GGMVDEALAILAILASHQ
Sbjct: 480 TPRGKKDAATAIFNLSIYQGNKARAVKAGIVPPLMRLLKDAGGGMVDEALAILAILASHQ 539

Query: 345 EGRVAIGQAEPTPVLVEVMRTGSP 416
           EG+VAIGQA+P PVL+EV+ TG P
Sbjct: 540 EGKVAIGQADPIPVLMEVISTGYP 563


>ref|XP_002311996.1| predicted protein [Populus trichocarpa] gi|222851816|gb|EEE89363.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score =  137 bits (345), Expect = 9e-31
 Identities = 69/83 (83%), Positives = 75/83 (90%)
 Frame = +3

Query: 165 SPRGKKDAATAIFNLLIYQGNKVRAVRAGIVVPLMRLLTDAAGGMVDEALAILAILASHQ 344
           +PRGKKDAATAIFNL IYQGNK RAV+AGIV PLMRLL DA GGMVDEALAILAILA HQ
Sbjct: 480 TPRGKKDAATAIFNLSIYQGNKARAVKAGIVPPLMRLLRDAGGGMVDEALAILAILAGHQ 539

Query: 345 EGRVAIGQAEPTPVLVEVMRTGS 413
           EG+VAIGQ +P PVL+EV+RTGS
Sbjct: 540 EGKVAIGQVDPIPVLIEVIRTGS 562


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