BLASTX nr result

ID: Coptis24_contig00013968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013968
         (889 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278130.1| PREDICTED: uncharacterized protein LOC100266...   115   1e-23
ref|XP_002263122.1| PREDICTED: uncharacterized protein LOC100263...   106   8e-21
ref|XP_004146296.1| PREDICTED: protein GLUTAMINE DUMPER 1-like [...   102   9e-20
ref|XP_002324938.1| predicted protein [Populus trichocarpa] gi|2...   102   1e-19
ref|XP_002515381.1| conserved hypothetical protein [Ricinus comm...   101   2e-19

>ref|XP_002278130.1| PREDICTED: uncharacterized protein LOC100266820 [Vitis vinifera]
          Length = 156

 Score =  115 bits (288), Expect = 1e-23
 Identities = 64/123 (52%), Positives = 75/123 (60%), Gaps = 2/123 (1%)
 Frame = +3

Query: 69  RTVATLNSPPPSSSQALRVPHSPWHSPVPYXXXXXXXXXXXXXXXXXXXXCSYWKLSGNF 248
           RT  TLN+   + + +++ PHSPWHSPVPY                    CSYWKLSG  
Sbjct: 3   RTGGTLNATAATPAASVQ-PHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYL 61

Query: 249 DSEENQ--EDLENGDEKSGDDVMKAPPVFEEKIVVIMAGDVKPTYLATPMSSRASSFGSN 422
           + +++    D E GD   GD V K P  FEEKI+VIMAGDVKPTYLATPMSSRASSFG  
Sbjct: 62  EGDDDSVARDAEAGDGAGGDAV-KPPMAFEEKILVIMAGDVKPTYLATPMSSRASSFGER 120

Query: 423 SIN 431
           S N
Sbjct: 121 SSN 123


>ref|XP_002263122.1| PREDICTED: uncharacterized protein LOC100263835 [Vitis vinifera]
          Length = 171

 Score =  106 bits (264), Expect = 8e-21
 Identities = 62/124 (50%), Positives = 74/124 (59%), Gaps = 4/124 (3%)
 Frame = +3

Query: 66  MRTVATLNSPPPSSSQALRVPHSPWHSPVPYXXXXXXXXXXXXXXXXXXXXCSYWKLS-G 242
           MRT AT N+   S +   R   SPWHSPVPY                    CSYW+ S G
Sbjct: 1   MRTGATFNATAASPATVQR---SPWHSPVPYLFGGLAAMLGLIAFALLILACSYWRFSNG 57

Query: 243 NFDSEEN--QEDLENGDEKSGDDVMKAPPV-FEEKIVVIMAGDVKPTYLATPMSSRASSF 413
           + D+ E+  + DLE+GD+  G D  K  PV +EEKIVVIMAGD KP +LATPMSSRASSF
Sbjct: 58  HLDNGESGGERDLESGDDGKGGDARKVGPVVYEEKIVVIMAGDEKPRFLATPMSSRASSF 117

Query: 414 GSNS 425
           G N+
Sbjct: 118 GDNN 121


>ref|XP_004146296.1| PREDICTED: protein GLUTAMINE DUMPER 1-like [Cucumis sativus]
          Length = 179

 Score =  102 bits (255), Expect = 9e-20
 Identities = 58/118 (49%), Positives = 66/118 (55%), Gaps = 4/118 (3%)
 Frame = +3

Query: 90  SPPPSSSQALRVPHSPWHSPVPYXXXXXXXXXXXXXXXXXXXXCSYWKLSGNFDSEE--- 260
           +P     Q  +  HSPWHSPVPY                    CSYWKLSG  D  +   
Sbjct: 16  APVAHHQQLQQQQHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLDGSDAAN 75

Query: 261 NQEDLENGDEKSGDDVMK-APPVFEEKIVVIMAGDVKPTYLATPMSSRASSFGSNSIN 431
            + DLE G     DD  K A PVFEEKI+VIMAG++KPTYLATPMSSR+SSFG    N
Sbjct: 76  REPDLEAG----ADDTQKQASPVFEEKILVIMAGEMKPTYLATPMSSRSSSFGDTKSN 129


>ref|XP_002324938.1| predicted protein [Populus trichocarpa] gi|222866372|gb|EEF03503.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score =  102 bits (254), Expect = 1e-19
 Identities = 56/125 (44%), Positives = 70/125 (56%)
 Frame = +3

Query: 39  LSLLNSTFKMRTVATLNSPPPSSSQALRVPHSPWHSPVPYXXXXXXXXXXXXXXXXXXXX 218
           +S L++T      A  +  PP+  Q    P SPWHSPVPY                    
Sbjct: 4   ISHLDTTISTTKAAATSPSPPAVVQ----PRSPWHSPVPYLFGGLAAMLGLIAFALLILA 59

Query: 219 CSYWKLSGNFDSEENQEDLENGDEKSGDDVMKAPPVFEEKIVVIMAGDVKPTYLATPMSS 398
           CSYW++SG  DSE    DLE+G+EK G    K   VFEEK +VIMAG+ KPT+LATP+ S
Sbjct: 60  CSYWRISGRLDSENEGNDLESGNEKEGKPENK---VFEEKFLVIMAGNEKPTFLATPVCS 116

Query: 399 RASSF 413
           +ASSF
Sbjct: 117 KASSF 121


>ref|XP_002515381.1| conserved hypothetical protein [Ricinus communis]
           gi|223545325|gb|EEF46830.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 183

 Score =  101 bits (252), Expect = 2e-19
 Identities = 62/123 (50%), Positives = 71/123 (57%), Gaps = 5/123 (4%)
 Frame = +3

Query: 72  TVATLNSPPPSSSQALRVPHSPWHSPVPYXXXXXXXXXXXXXXXXXXXXCSYWKLSGNFD 251
           T ATL+  PP  SQ  R   SPWHSPVPY                    CSYW+LSG  D
Sbjct: 14  TEATLS--PPLISQPQR---SPWHSPVPYLFGGLAAMLGLIAFALLILACSYWRLSGRVD 68

Query: 252 SEENQ---EDLENGDEKSGDDVMKA--PPVFEEKIVVIMAGDVKPTYLATPMSSRASSFG 416
           + E     +DLENG+EK G     A    V+EEKI+VIMAGD KPT+LATP+SSRA SFG
Sbjct: 69  NREGSHGGDDLENGNEKEGGANKAAGNDKVYEEKILVIMAGDQKPTFLATPVSSRAPSFG 128

Query: 417 SNS 425
             S
Sbjct: 129 DKS 131


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