BLASTX nr result
ID: Coptis24_contig00013968
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00013968 (889 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278130.1| PREDICTED: uncharacterized protein LOC100266... 115 1e-23 ref|XP_002263122.1| PREDICTED: uncharacterized protein LOC100263... 106 8e-21 ref|XP_004146296.1| PREDICTED: protein GLUTAMINE DUMPER 1-like [... 102 9e-20 ref|XP_002324938.1| predicted protein [Populus trichocarpa] gi|2... 102 1e-19 ref|XP_002515381.1| conserved hypothetical protein [Ricinus comm... 101 2e-19 >ref|XP_002278130.1| PREDICTED: uncharacterized protein LOC100266820 [Vitis vinifera] Length = 156 Score = 115 bits (288), Expect = 1e-23 Identities = 64/123 (52%), Positives = 75/123 (60%), Gaps = 2/123 (1%) Frame = +3 Query: 69 RTVATLNSPPPSSSQALRVPHSPWHSPVPYXXXXXXXXXXXXXXXXXXXXCSYWKLSGNF 248 RT TLN+ + + +++ PHSPWHSPVPY CSYWKLSG Sbjct: 3 RTGGTLNATAATPAASVQ-PHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYL 61 Query: 249 DSEENQ--EDLENGDEKSGDDVMKAPPVFEEKIVVIMAGDVKPTYLATPMSSRASSFGSN 422 + +++ D E GD GD V K P FEEKI+VIMAGDVKPTYLATPMSSRASSFG Sbjct: 62 EGDDDSVARDAEAGDGAGGDAV-KPPMAFEEKILVIMAGDVKPTYLATPMSSRASSFGER 120 Query: 423 SIN 431 S N Sbjct: 121 SSN 123 >ref|XP_002263122.1| PREDICTED: uncharacterized protein LOC100263835 [Vitis vinifera] Length = 171 Score = 106 bits (264), Expect = 8e-21 Identities = 62/124 (50%), Positives = 74/124 (59%), Gaps = 4/124 (3%) Frame = +3 Query: 66 MRTVATLNSPPPSSSQALRVPHSPWHSPVPYXXXXXXXXXXXXXXXXXXXXCSYWKLS-G 242 MRT AT N+ S + R SPWHSPVPY CSYW+ S G Sbjct: 1 MRTGATFNATAASPATVQR---SPWHSPVPYLFGGLAAMLGLIAFALLILACSYWRFSNG 57 Query: 243 NFDSEEN--QEDLENGDEKSGDDVMKAPPV-FEEKIVVIMAGDVKPTYLATPMSSRASSF 413 + D+ E+ + DLE+GD+ G D K PV +EEKIVVIMAGD KP +LATPMSSRASSF Sbjct: 58 HLDNGESGGERDLESGDDGKGGDARKVGPVVYEEKIVVIMAGDEKPRFLATPMSSRASSF 117 Query: 414 GSNS 425 G N+ Sbjct: 118 GDNN 121 >ref|XP_004146296.1| PREDICTED: protein GLUTAMINE DUMPER 1-like [Cucumis sativus] Length = 179 Score = 102 bits (255), Expect = 9e-20 Identities = 58/118 (49%), Positives = 66/118 (55%), Gaps = 4/118 (3%) Frame = +3 Query: 90 SPPPSSSQALRVPHSPWHSPVPYXXXXXXXXXXXXXXXXXXXXCSYWKLSGNFDSEE--- 260 +P Q + HSPWHSPVPY CSYWKLSG D + Sbjct: 16 APVAHHQQLQQQQHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLDGSDAAN 75 Query: 261 NQEDLENGDEKSGDDVMK-APPVFEEKIVVIMAGDVKPTYLATPMSSRASSFGSNSIN 431 + DLE G DD K A PVFEEKI+VIMAG++KPTYLATPMSSR+SSFG N Sbjct: 76 REPDLEAG----ADDTQKQASPVFEEKILVIMAGEMKPTYLATPMSSRSSSFGDTKSN 129 >ref|XP_002324938.1| predicted protein [Populus trichocarpa] gi|222866372|gb|EEF03503.1| predicted protein [Populus trichocarpa] Length = 178 Score = 102 bits (254), Expect = 1e-19 Identities = 56/125 (44%), Positives = 70/125 (56%) Frame = +3 Query: 39 LSLLNSTFKMRTVATLNSPPPSSSQALRVPHSPWHSPVPYXXXXXXXXXXXXXXXXXXXX 218 +S L++T A + PP+ Q P SPWHSPVPY Sbjct: 4 ISHLDTTISTTKAAATSPSPPAVVQ----PRSPWHSPVPYLFGGLAAMLGLIAFALLILA 59 Query: 219 CSYWKLSGNFDSEENQEDLENGDEKSGDDVMKAPPVFEEKIVVIMAGDVKPTYLATPMSS 398 CSYW++SG DSE DLE+G+EK G K VFEEK +VIMAG+ KPT+LATP+ S Sbjct: 60 CSYWRISGRLDSENEGNDLESGNEKEGKPENK---VFEEKFLVIMAGNEKPTFLATPVCS 116 Query: 399 RASSF 413 +ASSF Sbjct: 117 KASSF 121 >ref|XP_002515381.1| conserved hypothetical protein [Ricinus communis] gi|223545325|gb|EEF46830.1| conserved hypothetical protein [Ricinus communis] Length = 183 Score = 101 bits (252), Expect = 2e-19 Identities = 62/123 (50%), Positives = 71/123 (57%), Gaps = 5/123 (4%) Frame = +3 Query: 72 TVATLNSPPPSSSQALRVPHSPWHSPVPYXXXXXXXXXXXXXXXXXXXXCSYWKLSGNFD 251 T ATL+ PP SQ R SPWHSPVPY CSYW+LSG D Sbjct: 14 TEATLS--PPLISQPQR---SPWHSPVPYLFGGLAAMLGLIAFALLILACSYWRLSGRVD 68 Query: 252 SEENQ---EDLENGDEKSGDDVMKA--PPVFEEKIVVIMAGDVKPTYLATPMSSRASSFG 416 + E +DLENG+EK G A V+EEKI+VIMAGD KPT+LATP+SSRA SFG Sbjct: 69 NREGSHGGDDLENGNEKEGGANKAAGNDKVYEEKILVIMAGDQKPTFLATPVSSRAPSFG 128 Query: 417 SNS 425 S Sbjct: 129 DKS 131