BLASTX nr result
ID: Coptis24_contig00013784
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00013784
(1658 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002532127.1| leucine-rich repeat containing protein, puta... 356 e-123
ref|XP_002516740.1| leucine-rich repeat containing protein, puta... 339 e-117
emb|CAN82122.1| hypothetical protein VITISV_009093 [Vitis vinifera] 339 e-117
ref|XP_002271203.1| PREDICTED: putative disease resistance prote... 339 e-117
ref|XP_002336233.1| cc-nbs-lrr resistance protein [Populus trich... 322 e-114
>ref|XP_002532127.1| leucine-rich repeat containing protein, putative [Ricinus communis]
gi|223528186|gb|EEF30247.1| leucine-rich repeat
containing protein, putative [Ricinus communis]
Length = 1142
Score = 356 bits (913), Expect(2) = e-123
Identities = 179/304 (58%), Positives = 227/304 (74%), Gaps = 10/304 (3%)
Frame = -1
Query: 1658 GKTTLAQLVYNEDRVKEHFEVRIWVCVSEDFGIKRLTKAVIASISGNACDLEELDPLQCR 1479
GKTTLAQLVYN++RVK HF++RIWVCVS +F ++RL K +I S SGNAC +LDPLQ +
Sbjct: 178 GKTTLAQLVYNDERVKRHFDLRIWVCVSGEFDVRRLVKTIIESASGNACPCLDLDPLQRQ 237
Query: 1478 LQEQLVGKRYLLVLDDVWNENQEDWNRFMYSLKCGAKGSSVIVTTRLETVASITGTSPPY 1299
LQE L GKRYL+VLD VWN +Q+ W+R + L CG+KGSS+IVTTR+E VAS+ GT P +
Sbjct: 238 LQEILSGKRYLIVLDHVWNGDQDKWDRLKFVLACGSKGSSIIVTTRMEKVASVMGTLPAH 297
Query: 1298 CLKFLSEDDCWSLFKQRAFGMGNQG------IGKEIVKKCGAVPLAAKALGGLMRFKGEE 1137
L LSE DCW LFK+RAF + IG EIVKKCG VPLAAKALG LMR+K E
Sbjct: 298 NLSGLSEADCWLLFKERAFECRREEHPSIICIGHEIVKKCGGVPLAAKALGSLMRYKNGE 357
Query: 1136 NDWLSVRDNGLWDLTQSKENNILPALRLSYNHLPINLRQCFAFCSIFPKDHIIRKQEVIL 957
N+WLSV+++ +WDL Q E +I+PALRLSY++LP+ LR+CF +C+IFPKD +I K+++IL
Sbjct: 358 NEWLSVKESEIWDLPQD-ECSIMPALRLSYSNLPLKLRKCFVYCAIFPKDCVIHKEDIIL 416
Query: 956 LWMANGFVHSKEGRQLEDIGSEIFVSLLWRSFFQDVGKDEDENIVWCKM----HDLACSI 789
LWMANGF+ S + ED+G+EI L WRS FQDV KD+ +I KM HDLA S+
Sbjct: 417 LWMANGFISSTRREEPEDVGNEICSELCWRSLFQDVEKDKLGSIKRFKMHDLIHDLAHSV 476
Query: 788 MINE 777
M +E
Sbjct: 477 MEDE 480
Score = 113 bits (282), Expect(2) = e-123
Identities = 74/186 (39%), Positives = 100/186 (53%), Gaps = 3/186 (1%)
Frame = -3
Query: 657 SLRTLILLDHTNNGRSLEFDFC---TRFMSLRAMSLEVFGLVTIPDSIGDLEHLRYLNFS 487
SLRTL+L + +F +R +LR + L+ + SI L+HLRYL+ S
Sbjct: 520 SLRTLLLQPILLTAGKPKVEFSCDLSRLTTLRVFGIRRTNLMMLSSSIRHLKHLRYLDLS 579
Query: 486 RTDITSLPKSICKLRNXXXXXXXXXXXXXXLPKCFGKLRSLSHLDIRECYSLTQLPAGIG 307
T I LP+S+ L N LPK KL++L HL + C+SLT +P IG
Sbjct: 580 STLIWRLPESVSSLLNLQTLKLVNCVALQRLPKHIWKLKNLRHLYLNGCFSLTYMPPKIG 639
Query: 306 RLTLLQTLNIFIVSSNDGCHIKEFQELNQLRGELTITGLECVKNSMDAKAANLVGKLYLG 127
++T L+TLN+FIV GCHI E + L+ L G+L I LE V +AKAANL K L
Sbjct: 640 QITCLKTLNLFIVRKGSGCHISELEALD-LGGKLHIRHLERVGTPFEAKAANLNRKHKLQ 698
Query: 126 SLNLTW 109
L L+W
Sbjct: 699 DLRLSW 704
>ref|XP_002516740.1| leucine-rich repeat containing protein, putative [Ricinus communis]
gi|223544113|gb|EEF45638.1| leucine-rich repeat
containing protein, putative [Ricinus communis]
Length = 1104
Score = 339 bits (869), Expect(2) = e-117
Identities = 170/318 (53%), Positives = 227/318 (71%), Gaps = 11/318 (3%)
Frame = -1
Query: 1658 GKTTLAQLVYNEDRVKEHFEVRIWVCVSEDFGIKRLTKAVIASISGNACDLEELDPLQCR 1479
GKTTLAQLVYN+ VK F++RIWVCVS+DF ++RLT+A++ SI G + +E+DPLQ +
Sbjct: 199 GKTTLAQLVYNDTTVKRLFDMRIWVCVSDDFDLRRLTRAILESIEGCPPNCQEMDPLQRQ 258
Query: 1478 LQEQLVGKRYLLVLDDVWNENQEDWNRFMYSLKCGAKGSSVIVTTRLETVASITGTSPPY 1299
LQE+L GK++LL+LDDVWNE+ + W+ ++CGA GS V VTTR E +A + T+P Y
Sbjct: 259 LQERLSGKKFLLMLDDVWNESSDKWDGIKNMIRCGATGSVVTVTTRNENIALMMATTPTY 318
Query: 1298 CLKFLSEDDCWSLFKQRAFGMGN-------QGIGKEIVKKCGAVPLAAKALGGLMRFKGE 1140
+ LS+DD WSLF+QRAFG+ + IG+ IV KCG VPLA KA+G LMR K +
Sbjct: 319 YIGRLSDDDSWSLFEQRAFGLERKEEFLHLETIGRAIVNKCGGVPLAIKAMGSLMRLKRK 378
Query: 1139 ENDWLSVRDNGLWDLTQSKENNILPALRLSYNHLPINLRQCFAFCSIFPKDHIIRKQEVI 960
+++WLSV+++ +W+L+ + N+LPALRLSYNHL +L+QCFAFCSIFPKD I+K+++I
Sbjct: 379 KSEWLSVKESEMWELSNERNMNVLPALRLSYNHLAPHLKQCFAFCSIFPKDFHIKKEKLI 438
Query: 959 LLWMANGFVHSKEGRQLEDIGSEIFVSLLWRSFFQDVGKDEDENIVWCKM----HDLACS 792
LWMANGF+ + L D G EIF L+WRSF QDV +D N CKM HDLA S
Sbjct: 439 ELWMANGFIPCQGKMDLHDKGHEIFYELVWRSFLQDVEEDRLGNTT-CKMHDLIHDLAQS 497
Query: 791 IMINECRNIELGKFKSTP 738
+MI+EC+ IE K P
Sbjct: 498 MMIDECKLIEPNKVLHVP 515
Score = 112 bits (280), Expect(2) = e-117
Identities = 75/197 (38%), Positives = 114/197 (57%), Gaps = 5/197 (2%)
Frame = -3
Query: 657 SLRTLILLDHTNNGRSLEFDFCTRFMSLRAMSLEVFGLVTIPDSIGDLEHLRYLNFSRTD 478
SLR+ + +D+ + + + LR + L + L +P SI L+HLRYL+FS +
Sbjct: 542 SLRSFLWIDYGYRDDQVS-SYLFKQKHLRVLDLLNYHLQKLPMSIDRLKHLRYLDFSYSS 600
Query: 477 ITSLPKSICKLRNXXXXXXXXXXXXXXLPKCFGKLRSLSHLDIRECYSLTQLPAGIGRLT 298
I +LP+S L+ LPK +++L +LDI C SL+ +PA +G+LT
Sbjct: 601 IRTLPESTISLQILEILNLKHCYNLCKLPKGLKHIKNLVYLDITNCDSLSYMPAEMGKLT 660
Query: 297 LLQTLNIFIVSSNDGCHIKEFQELNQLRGELTITGLECVKNSMDAKAANLVGKLYLGSLN 118
L+ L++FIV ++GC ++E +ELN L G+L+I L+ VK+ DAK ANL+ K L SL+
Sbjct: 661 CLRKLSLFIVGKDNGCRMEELKELN-LGGDLSIKKLDYVKSCEDAKNANLMQKEDLKSLS 719
Query: 117 LTWS-----AS*LQEEV 82
L WS +S L EEV
Sbjct: 720 LCWSREGEDSSNLSEEV 736
>emb|CAN82122.1| hypothetical protein VITISV_009093 [Vitis vinifera]
Length = 1697
Score = 339 bits (869), Expect(2) = e-117
Identities = 167/319 (52%), Positives = 228/319 (71%), Gaps = 10/319 (3%)
Frame = -1
Query: 1658 GKTTLAQLVYNEDRVKEHFEVRIWVCVSEDFGIKRLTKAVIASISGNACDLEELDPLQCR 1479
GKTTLA+L YN+ R +HF+ RIWVCVSEDF +KR+ +A++ S +GN C L+E++ +Q R
Sbjct: 206 GKTTLAKLAYNDKRADKHFQQRIWVCVSEDFDVKRIMRAILESATGNTCHLQEMEVIQQR 265
Query: 1478 LQEQLVGKRYLLVLDDVWNENQEDWNRFMYSLKCGAKGSSVIVTTRLETVASITGTSPPY 1299
++E ++GKR+LLVLDDVW+++ + W R S++ G++GS ++VTTR E VA I GT PY
Sbjct: 266 IRELVMGKRFLLVLDDVWSDDHDKWERLKNSVRHGSEGSKILVTTRSEKVALIMGTISPY 325
Query: 1298 CLKFLSEDDCWSLFKQRAFGMGNQ------GIGKEIVKKCGAVPLAAKALGGLMRFKGEE 1137
LK L EDDCWSLF+QRAF +G IG +IVKKC VPLAAK LG LM FK E+
Sbjct: 326 YLKGLPEDDCWSLFEQRAFKLGVPKEASIVAIGNDIVKKCRGVPLAAKTLGSLMCFKREK 385
Query: 1136 NDWLSVRDNGLWDLTQSKENNILPALRLSYNHLPINLRQCFAFCSIFPKDHIIRKQEVIL 957
++W+ V+D+ +W+L EN IL LRLSY+ LP +L+QCFA+CSIFPKD+ I K+ ++
Sbjct: 386 SEWVDVKDSEIWNLL-GGENGILQVLRLSYDDLPSHLKQCFAYCSIFPKDYCIEKENLVQ 444
Query: 956 LWMANGFVHSKEGRQLEDIGSEIFVSLLWRSFFQDVGKDEDENIVWCKM----HDLACSI 789
LWMA GF+ S + E++G+E F LLWRSFF++V KD D NIV C M HDLA S+
Sbjct: 445 LWMAEGFLPSSGRKAPEEVGNEYFNELLWRSFFENVTKDSDGNIVKCGMHHLFHDLARSV 504
Query: 788 MINECRNIELGKFKSTPDA 732
++C +E+G+ S P A
Sbjct: 505 SGSDCSAVEVGRQVSIPAA 523
Score = 110 bits (276), Expect(2) = e-117
Identities = 77/182 (42%), Positives = 93/182 (51%)
Frame = -3
Query: 654 LRTLILLDHTNNGRSLEFDFCTRFMSLRAMSLEVFGLVTIPDSIGDLEHLRYLNFSRTDI 475
+R+ +LL + +F + F SLRA+ + + SIG L+HLRYLN S I
Sbjct: 548 VRSFLLLVGWQKIPKVSHNFISSFKSLRALDISSTRAKKLSKSIGALKHLRYLNLSGARI 607
Query: 474 TSLPKSICKLRNXXXXXXXXXXXXXXLPKCFGKLRSLSHLDIRECYSLTQLPAGIGRLTL 295
LP SIC L LPK KL L HL+I C SL +LP GIG+L+
Sbjct: 608 KKLPSSICGLLYLQTLILKHCDLLEMLPKDLRKLIFLRHLNIYACRSLVKLPNGIGKLSS 667
Query: 294 LQTLNIFIVSSNDGCHIKEFQELNQLRGELTITGLECVKNSMDAKAANLVGKLYLGSLNL 115
LQTL IFIV I E Q L+ L GEL I LE V N A+AANL K L SL L
Sbjct: 668 LQTLPIFIVGRGTASSIAELQGLD-LHGELMIKNLENVXNKRCARAANLKEKRNLRSLKL 726
Query: 114 TW 109
W
Sbjct: 727 LW 728
>ref|XP_002271203.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
vinifera]
Length = 1179
Score = 339 bits (869), Expect(2) = e-117
Identities = 167/319 (52%), Positives = 228/319 (71%), Gaps = 10/319 (3%)
Frame = -1
Query: 1658 GKTTLAQLVYNEDRVKEHFEVRIWVCVSEDFGIKRLTKAVIASISGNACDLEELDPLQCR 1479
GKTTLA+L YN+ R +HF+ RIWVCVSEDF +KR+ +A++ S +GN C L+E++ +Q R
Sbjct: 206 GKTTLAKLAYNDKRADKHFQQRIWVCVSEDFDVKRIMRAILESATGNTCHLQEMEVIQQR 265
Query: 1478 LQEQLVGKRYLLVLDDVWNENQEDWNRFMYSLKCGAKGSSVIVTTRLETVASITGTSPPY 1299
++E ++GKR+LLVLDDVW+++ + W R S++ G++GS ++VTTR E VA I GT PY
Sbjct: 266 IRELVMGKRFLLVLDDVWSDDHDKWERLKNSVRHGSEGSKILVTTRSEKVALIMGTISPY 325
Query: 1298 CLKFLSEDDCWSLFKQRAFGMGNQ------GIGKEIVKKCGAVPLAAKALGGLMRFKGEE 1137
LK L EDDCWSLF+QRAF +G IG +IVKKC VPLAAK LG LM FK E+
Sbjct: 326 YLKGLPEDDCWSLFEQRAFKLGVPKEASIVAIGNDIVKKCRGVPLAAKTLGSLMCFKREK 385
Query: 1136 NDWLSVRDNGLWDLTQSKENNILPALRLSYNHLPINLRQCFAFCSIFPKDHIIRKQEVIL 957
++W+ V+D+ +W+L EN IL LRLSY+ LP +L+QCFA+CSIFPKD+ I K+ ++
Sbjct: 386 SEWVDVKDSEIWNLL-GGENGILQVLRLSYDDLPSHLKQCFAYCSIFPKDYCIEKENLVQ 444
Query: 956 LWMANGFVHSKEGRQLEDIGSEIFVSLLWRSFFQDVGKDEDENIVWCKM----HDLACSI 789
LWMA GF+ S + E++G+E F LLWRSFF++V KD D NIV C M HDLA S+
Sbjct: 445 LWMAEGFLPSSGRKAPEEVGNEYFNELLWRSFFENVTKDSDGNIVKCGMHHLFHDLARSV 504
Query: 788 MINECRNIELGKFKSTPDA 732
++C +E+G+ S P A
Sbjct: 505 SGSDCSAVEVGRQVSIPAA 523
Score = 110 bits (276), Expect(2) = e-117
Identities = 77/182 (42%), Positives = 93/182 (51%)
Frame = -3
Query: 654 LRTLILLDHTNNGRSLEFDFCTRFMSLRAMSLEVFGLVTIPDSIGDLEHLRYLNFSRTDI 475
+R+ +LL + +F + F SLRA+ + + SIG L+HLRYLN S I
Sbjct: 548 VRSFLLLVGWQKIPKVSHNFISSFKSLRALDISSTRAKKLSKSIGALKHLRYLNLSGARI 607
Query: 474 TSLPKSICKLRNXXXXXXXXXXXXXXLPKCFGKLRSLSHLDIRECYSLTQLPAGIGRLTL 295
LP SIC L LPK KL L HL+I C SL +LP GIG+L+
Sbjct: 608 KKLPSSICGLLYLQTLILKHCDLLEMLPKDLRKLIFLRHLNIYACRSLVKLPNGIGKLSS 667
Query: 294 LQTLNIFIVSSNDGCHIKEFQELNQLRGELTITGLECVKNSMDAKAANLVGKLYLGSLNL 115
LQTL IFIV I E Q L+ L GEL I LE V N A+AANL K L SL L
Sbjct: 668 LQTLPIFIVGRGTASSIAELQGLD-LHGELMIKNLENVMNKRCARAANLKEKRNLRSLKL 726
Query: 114 TW 109
W
Sbjct: 727 LW 728
>ref|XP_002336233.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
gi|222832784|gb|EEE71261.1| cc-nbs-lrr resistance protein
[Populus trichocarpa]
Length = 808
Score = 322 bits (824), Expect(2) = e-114
Identities = 166/310 (53%), Positives = 219/310 (70%), Gaps = 11/310 (3%)
Frame = -1
Query: 1658 GKTTLAQLVYNEDRVKEHFEVRIWVCVSEDFGIKRLTKAVIASISGNACDLEELDPLQCR 1479
GKTTL QLV+NE+ VK+ F +RIWVCVS DF + RLT+A+I SI G C L+ELDPLQ
Sbjct: 199 GKTTLVQLVFNEESVKQQFSLRIWVCVSTDFDLGRLTRAIIESIDGAPCGLQELDPLQQC 258
Query: 1478 LQEQLVGKRYLLVLDDVWNENQEDWNRFMYSLKCGAKGSSVIVTTRLETVASITGTSPPY 1299
LQ++L GK++LLVLDDVW++ + WN+ L+CGAKGS+VIVTTR+E VA T+
Sbjct: 259 LQQKLNGKKFLLVLDDVWDDYGDRWNKLKEVLRCGAKGSAVIVTTRIEMVARRMATAFVQ 318
Query: 1298 CLKFLSEDDCWSLFKQRAFGMGN-------QGIGKEIVKKCGAVPLAAKALGGLMRFKGE 1140
+ LSE+D W LF++ AFGM + IG IVKKCG VPLA KALG LMR K
Sbjct: 319 QMGRLSEEDSWQLFQRLAFGMRRKEEWAHLEAIGVSIVKKCGGVPLAIKALGNLMRLKDN 378
Query: 1139 ENDWLSVRDNGLWDLTQSKENNILPALRLSYNHLPINLRQCFAFCSIFPKDHIIRKQEVI 960
E+ W++V+++ +WDL + + + ILPALRLSY +L +L+QCFA+C+IFPKDH++R++E++
Sbjct: 379 EDQWIAVKESEIWDL-REEASKILPALRLSYTNLSPHLKQCFAYCAIFPKDHVMRREELV 437
Query: 959 LLWMANGFVHSKEGRQLEDIGSEIFVSLLWRSFFQDVGKDEDENIVWCK----MHDLACS 792
LWMANGF+ K+ L +G EIF L+ RSF Q+V D +NI CK MHDLA S
Sbjct: 438 ALWMANGFISCKKEMDLHVMGIEIFNELVGRSFLQEVEDDGFDNIT-CKMHDLMHDLAQS 496
Query: 791 IMINECRNIE 762
I + EC N E
Sbjct: 497 IAVQECYNTE 506
Score = 119 bits (298), Expect(2) = e-114
Identities = 77/190 (40%), Positives = 109/190 (57%), Gaps = 4/190 (2%)
Frame = -3
Query: 657 SLRTLILLDHT----NNGRSLEFDFCTRFMSLRAMSLEVFGLVTIPDSIGDLEHLRYLNF 490
SLR+ +L+D+ G+SL ++ RA+SL + +P SI DL+HLRYL+
Sbjct: 524 SLRSCLLVDYDWIQKRWGKSLNMYSSSK--KHRALSLRNVRVKKLPKSICDLKHLRYLDV 581
Query: 489 SRTDITSLPKSICKLRNXXXXXXXXXXXXXXLPKCFGKLRSLSHLDIRECYSLTQLPAGI 310
S + I +LP+ I L+N LPK +++SL +LDI C+SL +P G+
Sbjct: 582 SGSWIITLPECITSLQNLQTLDLRDCRELIQLPKGMKEMKSLVYLDITGCHSLRFMPCGM 641
Query: 309 GRLTLLQTLNIFIVSSNDGCHIKEFQELNQLRGELTITGLECVKNSMDAKAANLVGKLYL 130
G+L L+ L +FIV DG I E + LN L GEL+IT L+ VKNS DA+ ANL K L
Sbjct: 642 GQLICLRKLTLFIVGKEDGRFIGELERLNNLAGELSITDLDNVKNSTDARTANLKLKAAL 701
Query: 129 GSLNLTWSAS 100
SL L+W +
Sbjct: 702 LSLTLSWQVN 711