BLASTX nr result

ID: Coptis24_contig00013737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013737
         (732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB62040.1| CjMDR1 [Coptis japonica]                              147   2e-33
dbj|BAM11098.1| ABC protein [Coptis japonica]                         147   2e-33
ref|XP_002515186.1| multidrug resistance protein 1, 2, putative ...   145   1e-32
ref|XP_002515185.1| multidrug resistance protein 1, 2, putative ...   145   1e-32
ref|XP_002320942.1| multidrug/pheromone exporter, MDR family, AB...   142   9e-32

>dbj|BAB62040.1| CjMDR1 [Coptis japonica]
          Length = 1289

 Score =  147 bits (372), Expect = 2e-33
 Identities = 79/131 (60%), Positives = 91/131 (69%)
 Frame = +2

Query: 338  MVYEEASQIANDAVGNMRTVSSLCAEEKVMQLYKRKCEGPRKTGIRQGLVSGIRFGLSIC 517
            M+YEEASQ+ANDAVG++RTV+S CAEEKVMQLYK+KCEGP KTGIRQGL+SGI FG+S  
Sbjct: 899  MMYEEASQVANDAVGSIRTVASFCAEEKVMQLYKKKCEGPMKTGIRQGLISGIGFGISFF 958

Query: 518  XXXXXXXXXXXXXXQLVLDGKTTXXXXXXXXXXXXXAAIGISESSSYIPDSGTAKDSTAS 697
                          +LV  GKTT             AA+GIS+SSS  PDS  AK STAS
Sbjct: 959  LLFNVYATSFYAGARLVDAGKTTFSDVFRVFFALTMAALGISQSSSLAPDSSKAKSSTAS 1018

Query: 698  LFAILDRKSKI 730
            +F ILDRKSKI
Sbjct: 1019 IFGILDRKSKI 1029


>dbj|BAM11098.1| ABC protein [Coptis japonica]
          Length = 1292

 Score =  147 bits (371), Expect = 2e-33
 Identities = 77/131 (58%), Positives = 93/131 (70%)
 Frame = +2

Query: 338  MVYEEASQIANDAVGNMRTVSSLCAEEKVMQLYKRKCEGPRKTGIRQGLVSGIRFGLSIC 517
            M+YEEASQ+A+DAVG++RTV+S CAEEKVMQLYK+KCEGP KTGIRQGL+SGI FG+S  
Sbjct: 902  MMYEEASQVASDAVGSIRTVASFCAEEKVMQLYKKKCEGPMKTGIRQGLISGIGFGVSFF 961

Query: 518  XXXXXXXXXXXXXXQLVLDGKTTXXXXXXXXXXXXXAAIGISESSSYIPDSGTAKDSTAS 697
                          +LV DGKTT             AA+GIS+SSS+ PDS  A+ STAS
Sbjct: 962  LLYNVYATSFYVGARLVEDGKTTFAEVFRVFFALTMAALGISQSSSFAPDSSKARASTAS 1021

Query: 698  LFAILDRKSKI 730
            ++ ILDRKSKI
Sbjct: 1022 IYGILDRKSKI 1032


>ref|XP_002515186.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
            gi|223545666|gb|EEF47170.1| multidrug resistance protein
            1, 2, putative [Ricinus communis]
          Length = 1292

 Score =  145 bits (365), Expect = 1e-32
 Identities = 77/131 (58%), Positives = 91/131 (69%)
 Frame = +2

Query: 338  MVYEEASQIANDAVGNMRTVSSLCAEEKVMQLYKRKCEGPRKTGIRQGLVSGIRFGLSIC 517
            M+YEEASQ+ANDAVG++RTV+S CAEEKVMQLY++KCEGP KTGIRQGLVSGI FG+S  
Sbjct: 900  MMYEEASQVANDAVGSIRTVASFCAEEKVMQLYRKKCEGPLKTGIRQGLVSGIGFGVSFF 959

Query: 518  XXXXXXXXXXXXXXQLVLDGKTTXXXXXXXXXXXXXAAIGISESSSYIPDSGTAKDSTAS 697
                          QLV  GK T             AA+GIS+SSS+ PDS  AK + AS
Sbjct: 960  LLFSVYATSFYAGAQLVKHGKATFTDVFQVFFALTVAAMGISQSSSFAPDSSKAKTAVAS 1019

Query: 698  LFAILDRKSKI 730
            +F+ILDRKSKI
Sbjct: 1020 IFSILDRKSKI 1030


>ref|XP_002515185.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
            gi|223545665|gb|EEF47169.1| multidrug resistance protein
            1, 2, putative [Ricinus communis]
          Length = 1292

 Score =  145 bits (365), Expect = 1e-32
 Identities = 76/131 (58%), Positives = 91/131 (69%)
 Frame = +2

Query: 338  MVYEEASQIANDAVGNMRTVSSLCAEEKVMQLYKRKCEGPRKTGIRQGLVSGIRFGLSIC 517
            M+YEEASQ+ANDAVG++RTV+S CAEEKVMQLY++KCEGP KTGIRQGL+SGI FG+S  
Sbjct: 900  MMYEEASQVANDAVGSIRTVASFCAEEKVMQLYRKKCEGPLKTGIRQGLISGIGFGVSFF 959

Query: 518  XXXXXXXXXXXXXXQLVLDGKTTXXXXXXXXXXXXXAAIGISESSSYIPDSGTAKDSTAS 697
                          QLV  GKTT             A +GIS+SSS+ PDS  AK + AS
Sbjct: 960  LLFSVYATSFYAGAQLVKHGKTTFSDVFQVFFALTMATMGISQSSSFAPDSSKAKSAVAS 1019

Query: 698  LFAILDRKSKI 730
            +F+ILDRKSKI
Sbjct: 1020 VFSILDRKSKI 1030


>ref|XP_002320942.1| multidrug/pheromone exporter, MDR family, ABC transporter family
            [Populus trichocarpa] gi|222861715|gb|EEE99257.1|
            multidrug/pheromone exporter, MDR family, ABC transporter
            family [Populus trichocarpa]
          Length = 1294

 Score =  142 bits (357), Expect = 9e-32
 Identities = 74/130 (56%), Positives = 89/130 (68%)
 Frame = +2

Query: 341  VYEEASQIANDAVGNMRTVSSLCAEEKVMQLYKRKCEGPRKTGIRQGLVSGIRFGLSICX 520
            +YEEASQ+ANDAVG++RTV+S CAEEKVMQLY+RKCEGP +TGIRQG++SG  FG+S   
Sbjct: 903  MYEEASQVANDAVGSIRTVASFCAEEKVMQLYRRKCEGPMRTGIRQGMISGTGFGVSFFL 962

Query: 521  XXXXXXXXXXXXXQLVLDGKTTXXXXXXXXXXXXXAAIGISESSSYIPDSGTAKDSTASL 700
                         QLV  GKT              AAIGIS+SSS+ PDS  AK + AS+
Sbjct: 963  LFSVYATTFYVGAQLVRHGKTNFADVFRVFFALTMAAIGISQSSSFAPDSSKAKGAAASI 1022

Query: 701  FAILDRKSKI 730
            FAI+DRKSKI
Sbjct: 1023 FAIIDRKSKI 1032


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