BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013735
         (1025 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [...   508   e-142
emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]   508   e-142
ref|XP_002319467.1| global transcription factor group [Populus t...   484   e-134
ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinu...   479   e-133
ref|XP_002318930.1| global transcription factor group [Populus t...   466   e-129

>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1071

 Score =  508 bits (1309), Expect = e-142
 Identities = 266/343 (77%), Positives = 296/343 (86%), Gaps = 2/343 (0%)
 Frame = -3

Query: 1023 IVEPARVKVKLKAENVDICYPPIFQSGGEFDLKASASSNEDNLYYDSMSVIICAVGSRYN 844
            I+EPARVKVKLKAENVDICYPPIFQSGGEFDL+ SASSN++NLYYDS SVIICA+GSRYN
Sbjct: 247  ILEPARVKVKLKAENVDICYPPIFQSGGEFDLRPSASSNDENLYYDSTSVIICAIGSRYN 306

Query: 843  SYCSNVARSFLIDANAVQSKAYEVLLKAHEAAIAALKPGNRVSAAYEAALSVVKRDAPEF 664
            SYCSNVAR+FLIDANA+QSKAYEVLLKAHEAAI ALKPGN+VSAAY+AAL+VV++DAPE 
Sbjct: 307  SYCSNVARTFLIDANAMQSKAYEVLLKAHEAAIGALKPGNKVSAAYQAALAVVEKDAPEL 366

Query: 663  TPNLTKSAGTGIGLEFRESGMNLNAKNDRVLKAGMVFNVSLGFQDLQTKTDSPKTEKFSL 484
              NLTKSAGTGIGLEFRESG+NLNAKNDRVLK GMVFNVSLGFQ+LQT T++PKT+KFS+
Sbjct: 367  VSNLTKSAGTGIGLEFRESGLNLNAKNDRVLKPGMVFNVSLGFQNLQTDTNNPKTQKFSV 426

Query: 483  LLADTVIINEKVPEVVTAISSKAVKDVAYSFN--XXXXXXEKPKVRAESISSDALLTKAT 310
            LLAD+VI+ EK PEVVT+ISSKAVKDVAYSFN        E+PKV+ E+   +A+ +KAT
Sbjct: 427  LLADSVIVGEKGPEVVTSISSKAVKDVAYSFNEDDDEEEEERPKVKPEANGGEAVSSKAT 486

Query: 309  LRSDNQEMSKEELRRQHQAELARQKNEETXXXXXXXXXXXXXXXXXXXXXSDLIAYKNVN 130
            LRSDNQEMSKEELRRQHQAELARQKNEET                      DLIAYKNVN
Sbjct: 487  LRSDNQEMSKEELRRQHQAELARQKNEETARRLAGGGSGAGDNRGAVKATGDLIAYKNVN 546

Query: 129  DMPPPRDRELMIQIDQKNEAILLPIYGSMVPFHVATVKSVSSQ 1
            D+PPP  +ELMIQ+DQKNEAILLPIYGSMVPFHVATVKSVSSQ
Sbjct: 547  DLPPP--KELMIQVDQKNEAILLPIYGSMVPFHVATVKSVSSQ 587


>emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]
          Length = 1019

 Score =  508 bits (1309), Expect = e-142
 Identities = 266/343 (77%), Positives = 296/343 (86%), Gaps = 2/343 (0%)
 Frame = -3

Query: 1023 IVEPARVKVKLKAENVDICYPPIFQSGGEFDLKASASSNEDNLYYDSMSVIICAVGSRYN 844
            I+EPARVKVKLKAENVDICYPPIFQSGGEFDL+ SASSN++NLYYDS SVIICA+GSRYN
Sbjct: 247  ILEPARVKVKLKAENVDICYPPIFQSGGEFDLRPSASSNDENLYYDSTSVIICAIGSRYN 306

Query: 843  SYCSNVARSFLIDANAVQSKAYEVLLKAHEAAIAALKPGNRVSAAYEAALSVVKRDAPEF 664
            SYCSNVAR+FLIDANA+QSKAYEVLLKAHEAAI ALKPGN+VSAAY+AAL+VV++DAPE 
Sbjct: 307  SYCSNVARTFLIDANAMQSKAYEVLLKAHEAAIGALKPGNKVSAAYQAALAVVEKDAPEL 366

Query: 663  TPNLTKSAGTGIGLEFRESGMNLNAKNDRVLKAGMVFNVSLGFQDLQTKTDSPKTEKFSL 484
              NLTKSAGTGIGLEFRESG+NLNAKNDRVLK GMVFNVSLGFQ+LQT T++PKT+KFS+
Sbjct: 367  VTNLTKSAGTGIGLEFRESGLNLNAKNDRVLKPGMVFNVSLGFQNLQTDTNNPKTQKFSV 426

Query: 483  LLADTVIINEKVPEVVTAISSKAVKDVAYSFN--XXXXXXEKPKVRAESISSDALLTKAT 310
            LLAD+VI+ EK PEVVT+ISSKAVKDVAYSFN        E+PKV+ E+   +A+ +KAT
Sbjct: 427  LLADSVIVGEKGPEVVTSISSKAVKDVAYSFNEDDDEEEEERPKVKPEANGGEAVSSKAT 486

Query: 309  LRSDNQEMSKEELRRQHQAELARQKNEETXXXXXXXXXXXXXXXXXXXXXSDLIAYKNVN 130
            LRSDNQEMSKEELRRQHQAELARQKNEET                      DLIAYKNVN
Sbjct: 487  LRSDNQEMSKEELRRQHQAELARQKNEETARRLAGGGSGAGDNRGAVKATGDLIAYKNVN 546

Query: 129  DMPPPRDRELMIQIDQKNEAILLPIYGSMVPFHVATVKSVSSQ 1
            D+PPP  +ELMIQ+DQKNEAILLPIYGSMVPFHVATVKSVSSQ
Sbjct: 547  DLPPP--KELMIQVDQKNEAILLPIYGSMVPFHVATVKSVSSQ 587


>ref|XP_002319467.1| global transcription factor group [Populus trichocarpa]
            gi|222857843|gb|EEE95390.1| global transcription factor
            group [Populus trichocarpa]
          Length = 1053

 Score =  484 bits (1245), Expect = e-134
 Identities = 246/341 (72%), Positives = 287/341 (84%)
 Frame = -3

Query: 1023 IVEPARVKVKLKAENVDICYPPIFQSGGEFDLKASASSNEDNLYYDSMSVIICAVGSRYN 844
            I+EPAR+KVKLKAENVDICYPP+FQSGGEFDLK SA+SN++NLYYDS SVIICA+GSRYN
Sbjct: 249  ILEPARIKVKLKAENVDICYPPVFQSGGEFDLKPSAASNDENLYYDSTSVIICAIGSRYN 308

Query: 843  SYCSNVARSFLIDANAVQSKAYEVLLKAHEAAIAALKPGNRVSAAYEAALSVVKRDAPEF 664
            SYCSNVAR++LIDAN +QSKAYE+LL+AHEAAI+ALKPGN VSA Y+AALSVV++DAPE 
Sbjct: 309  SYCSNVARTYLIDANPMQSKAYEILLQAHEAAISALKPGNMVSAVYQAALSVVEKDAPEL 368

Query: 663  TPNLTKSAGTGIGLEFRESGMNLNAKNDRVLKAGMVFNVSLGFQDLQTKTDSPKTEKFSL 484
            T NLTK+AGTGIGLEFRESG++LN+KND+VL+ GMVFNVSLGFQ LQ +T +PKT+K+S+
Sbjct: 369  TANLTKTAGTGIGLEFRESGLSLNSKNDQVLRQGMVFNVSLGFQHLQAETKNPKTQKYSV 428

Query: 483  LLADTVIINEKVPEVVTAISSKAVKDVAYSFNXXXXXXEKPKVRAESISSDALLTKATLR 304
            LLADTVI+ EK  +VVT+  +KAVKDVAYSFN      ++PKV+ E   S+  L+KATLR
Sbjct: 429  LLADTVIVGEKFADVVTSKCTKAVKDVAYSFNEDDQEEDRPKVKPERRGSETTLSKATLR 488

Query: 303  SDNQEMSKEELRRQHQAELARQKNEETXXXXXXXXXXXXXXXXXXXXXSDLIAYKNVNDM 124
            SDN EMSK+ELRRQHQAELARQKNEET                      DLIAYKNVND+
Sbjct: 489  SDNHEMSKKELRRQHQAELARQKNEETARRLAGGGSAATDNRGGAKTIGDLIAYKNVNDL 548

Query: 123  PPPRDRELMIQIDQKNEAILLPIYGSMVPFHVATVKSVSSQ 1
            PPPRD   MIQIDQ+NEAI+LPI+GSMVPFHVATVKSVSSQ
Sbjct: 549  PPPRD--FMIQIDQRNEAIILPIHGSMVPFHVATVKSVSSQ 587


>ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinus communis]
            gi|223548526|gb|EEF50017.1| FACT complex subunit SPT16,
            putative [Ricinus communis]
          Length = 1098

 Score =  479 bits (1232), Expect = e-133
 Identities = 249/342 (72%), Positives = 287/342 (83%), Gaps = 1/342 (0%)
 Frame = -3

Query: 1023 IVEPARVKVKLKAENVDICYPPIFQSGGEFDLKASASSNEDNLYYDSMSVIICAVGSRYN 844
            I+EPAR+KVKLKAEN+DICYPPIFQSGGEFDLK SA+SN+DNLYYDS SVIICA+GSRYN
Sbjct: 245  ILEPARIKVKLKAENIDICYPPIFQSGGEFDLKPSAASNDDNLYYDSTSVIICAIGSRYN 304

Query: 843  SYCSNVARSFLIDANAVQSKAYEVLLKAHEAAIAALKPGNRVSAAYEAALSVVKRDAPEF 664
            SYCSNVAR+FLIDAN++QSKAYEVLL+A EAAI+ALK GN+VSA Y AALSVV++DAPE 
Sbjct: 305  SYCSNVARTFLIDANSMQSKAYEVLLRAQEAAISALKSGNQVSAVYLAALSVVEKDAPEL 364

Query: 663  TPNLTKSAGTGIGLEFRESGMNLNAKNDRVLKAGMVFNVSLGFQDLQTKTDSPKTEKFSL 484
              NLTK+AGTGIGLEFRESG++L++KN+R+L+ GMVFNVSLGFQ+L T+T+ PKT+KFS+
Sbjct: 365  AANLTKTAGTGIGLEFRESGLSLSSKNNRILRPGMVFNVSLGFQNLHTETNKPKTQKFSV 424

Query: 483  LLADTVIINEKVPEVVTAISSKAVKDVAYSFNXXXXXXEK-PKVRAESISSDALLTKATL 307
            LLADTVI+ EK+P+VVT+ SSKA KDVAYSFN      E+  K R E    +A L+KATL
Sbjct: 425  LLADTVIVGEKLPDVVTSKSSKAFKDVAYSFNEDDDEEEELSKARVEVKGGEATLSKATL 484

Query: 306  RSDNQEMSKEELRRQHQAELARQKNEETXXXXXXXXXXXXXXXXXXXXXSDLIAYKNVND 127
            RSDN EMSKEELRRQHQAELARQKNEET                      DLIAYKNVND
Sbjct: 485  RSDNHEMSKEELRRQHQAELARQKNEETARRLAGGGSSASDNRGSVKMIGDLIAYKNVND 544

Query: 126  MPPPRDRELMIQIDQKNEAILLPIYGSMVPFHVATVKSVSSQ 1
            +PPPRD  LMIQ+DQKNEAIL+PI+GSMVPFHVATVKSVSSQ
Sbjct: 545  LPPPRD--LMIQVDQKNEAILIPIHGSMVPFHVATVKSVSSQ 584


>ref|XP_002318930.1| global transcription factor group [Populus trichocarpa]
            gi|222857306|gb|EEE94853.1| global transcription factor
            group [Populus trichocarpa]
          Length = 1082

 Score =  466 bits (1198), Expect = e-129
 Identities = 240/341 (70%), Positives = 279/341 (81%)
 Frame = -3

Query: 1023 IVEPARVKVKLKAENVDICYPPIFQSGGEFDLKASASSNEDNLYYDSMSVIICAVGSRYN 844
            I++P R K KLKA+NVDICYPPIFQSGGEFDL+ SA+SN++ LYYDS SVII AVGSRYN
Sbjct: 245  ILDPTRAKAKLKADNVDICYPPIFQSGGEFDLRPSAASNDEPLYYDSASVIIIAVGSRYN 304

Query: 843  SYCSNVARSFLIDANAVQSKAYEVLLKAHEAAIAALKPGNRVSAAYEAALSVVKRDAPEF 664
            SYCSNVAR+ +IDA  +QSKAY VLLKAHEAAI ALKPGN+VSAAY+AALSVV+ +APE 
Sbjct: 305  SYCSNVARTLMIDATPLQSKAYAVLLKAHEAAIGALKPGNKVSAAYQAALSVVEEEAPEL 364

Query: 663  TPNLTKSAGTGIGLEFRESGMNLNAKNDRVLKAGMVFNVSLGFQDLQTKTDSPKTEKFSL 484
             PNL+KSAGTGIGLEFRESG+NLNAKNDRV+KA MVFNVSLGFQ+LQ + D+PK   FSL
Sbjct: 365  VPNLSKSAGTGIGLEFRESGLNLNAKNDRVVKAKMVFNVSLGFQNLQNQIDNPKIRNFSL 424

Query: 483  LLADTVIINEKVPEVVTAISSKAVKDVAYSFNXXXXXXEKPKVRAESISSDALLTKATLR 304
            LLADTVI+ ++ P+VVT+ SSKAVKDVAYSFN      +KPK RAE    + L++K TLR
Sbjct: 425  LLADTVIVGDQNPDVVTSKSSKAVKDVAYSFNEGEEEEQKPKARAEVNGGENLMSKTTLR 484

Query: 303  SDNQEMSKEELRRQHQAELARQKNEETXXXXXXXXXXXXXXXXXXXXXSDLIAYKNVNDM 124
            SDN E+SKEELRRQHQAELARQKNEET                     +DL+AYKNVND+
Sbjct: 485  SDNGEISKEELRRQHQAELARQKNEETARRLAGGGSAKGDNRAASKTSTDLVAYKNVNDI 544

Query: 123  PPPRDRELMIQIDQKNEAILLPIYGSMVPFHVATVKSVSSQ 1
            PP RD  LMIQIDQKNEA+LLPIYG+MVPFHV+T+++VSSQ
Sbjct: 545  PPARD--LMIQIDQKNEAVLLPIYGNMVPFHVSTIRTVSSQ 583