BLASTX nr result

ID: Coptis24_contig00013698 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013698
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82285.1| hypothetical protein VITISV_039753 [Vitis vinifera]   102   3e-20
emb|CAN83332.1| hypothetical protein VITISV_025235 [Vitis vinifera]   101   6e-20
emb|CAN72188.1| hypothetical protein VITISV_020673 [Vitis vinifera]   100   1e-19
emb|CBL94154.1| putative polyprotein (retrotrasposon protein) [M...   100   2e-19
emb|CAN79949.1| hypothetical protein VITISV_044422 [Vitis vinifera]    99   4e-19

>emb|CAN82285.1| hypothetical protein VITISV_039753 [Vitis vinifera]
          Length = 1074

 Score =  102 bits (254), Expect = 3e-20
 Identities = 52/99 (52%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
 Frame = -2

Query: 295 LYYLDL-TETGEKQKNFLG*DNQVNRAENAKEVVWL*HRRLGHLSFSYLKRLQPQLFSVV 119
           LYYLDL ++   K +  L  D   +  E  K  +WL HRRLGH SF YLK+L P LF+  
Sbjct: 236 LYYLDLQSKDSNKLQQALMTDG--SEGEKKKSKIWLWHRRLGHASFGYLKKLSPSLFAKS 293

Query: 118 SESEFHCDICELVKSHRISYSPSINRCPVPFMKIHSDVW 2
             S F CDICEL KSHR+S+   +N+ P PFM IHSDVW
Sbjct: 294 DISSFRCDICELAKSHRVSFPLILNKSPFPFMVIHSDVW 332


>emb|CAN83332.1| hypothetical protein VITISV_025235 [Vitis vinifera]
          Length = 801

 Score =  101 bits (252), Expect = 6e-20
 Identities = 53/99 (53%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
 Frame = -2

Query: 295 LYYLDL-TETGEKQKNFLG*DNQVNRAENAKEVVWL*HRRLGHLSFSYLKRLQPQLFSVV 119
           LYYLDL ++   K +  L  D   +  E  K  +WL HRRLGH SF YLK+L P LFS  
Sbjct: 249 LYYLDLQSKDSNKLQQALMADG--SEGEKKKSEIWLWHRRLGHASFGYLKKLFPSLFSKS 306

Query: 118 SESEFHCDICELVKSHRISYSPSINRCPVPFMKIHSDVW 2
             S F CDICEL KSHR+S+   +N+ P PFM IHSDVW
Sbjct: 307 DISGFRCDICELAKSHRVSFPLILNKSPFPFMVIHSDVW 345


>emb|CAN72188.1| hypothetical protein VITISV_020673 [Vitis vinifera]
          Length = 988

 Score =  100 bits (249), Expect = 1e-19
 Identities = 52/99 (52%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
 Frame = -2

Query: 295 LYYLDL-TETGEKQKNFLG*DNQVNRAENAKEVVWL*HRRLGHLSFSYLKRLQPQLFSVV 119
           LYYLDL ++   K +  L  D   +  E  K  +WL HRRLGH SF YLK+L P LF+  
Sbjct: 186 LYYLDLQSKDSNKLQQALMADG--SEGEKKKSKIWLWHRRLGHASFGYLKKLFPSLFAKS 243

Query: 118 SESEFHCDICELVKSHRISYSPSINRCPVPFMKIHSDVW 2
             S F CDICEL KSHR+S+   +N+ P PFM IHSDVW
Sbjct: 244 DISGFRCDICELAKSHRVSFPLILNKSPFPFMVIHSDVW 282


>emb|CBL94154.1| putative polyprotein (retrotrasposon protein) [Malus x domestica]
          Length = 1390

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/100 (48%), Positives = 66/100 (66%)
 Frame = -2

Query: 301 KGLYYLDLTETGEKQKNFLG*DNQVNRAENAKEVVWL*HRRLGHLSFSYLKRLQPQLFSV 122
           +GLYY+D   TG           + +++ N +EV WL HRRLGH SF YL+ L P LFS 
Sbjct: 427 EGLYYVDDVATGRAHAV------RASQSSNLQEV-WLLHRRLGHASFGYLRHLLPSLFSG 479

Query: 121 VSESEFHCDICELVKSHRISYSPSINRCPVPFMKIHSDVW 2
           ++ES+ HC++C L KSHR S+ PS+N+  +PF  +HSDVW
Sbjct: 480 INESDLHCEVCILAKSHRASFPPSMNKRALPFELVHSDVW 519


>emb|CAN79949.1| hypothetical protein VITISV_044422 [Vitis vinifera]
          Length = 1176

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 52/99 (52%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
 Frame = -2

Query: 295 LYYLDL-TETGEKQKNFLG*DNQVNRAENAKEVVWL*HRRLGHLSFSYLKRLQPQLFSVV 119
           LYYLDL ++   K +  L  D   +  E  K  +WL HRRLGH SF YLK+L P LF+  
Sbjct: 236 LYYLDLQSKDSNKLQQALMADG--SEGEKKKSEIWLWHRRLGHASFGYLKKLFPSLFAKS 293

Query: 118 SESEFHCDICELVKSHRISYSPSINRCPVPFMKIHSDVW 2
             S F CDICEL KSHR S+   +N+ P PFM IHSDVW
Sbjct: 294 DISGFRCDICELAKSHRASFPLILNKSPFPFMVIHSDVW 332


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