BLASTX nr result

ID: Coptis24_contig00013690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013690
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509890.1| Transmembrane protein TPARL, putative [Ricin...   214   6e-54
emb|CBI34418.3| unnamed protein product [Vitis vinifera]              211   6e-53
ref|XP_002272191.1| PREDICTED: GDT1-like protein 1, chloroplasti...   211   6e-53
ref|NP_001241025.1| uncharacterized protein LOC100809618 [Glycin...   210   1e-52
ref|XP_003611045.1| Transmembrane protein [Medicago truncatula] ...   207   7e-52

>ref|XP_002509890.1| Transmembrane protein TPARL, putative [Ricinus communis]
           gi|223549789|gb|EEF51277.1| Transmembrane protein TPARL,
           putative [Ricinus communis]
          Length = 375

 Score =  214 bits (545), Expect = 6e-54
 Identities = 108/137 (78%), Positives = 116/137 (84%)
 Frame = +2

Query: 2   LPYFGDLGDISTGFASAFLLIFFSELGDKTFFIAALLAARNSGTVIFIGTFSALAAMTII 181
           +PY GDLGDISTGFASAFLLIFFSELGDKTFFIAALLAARNS   +F GTF ALA MTII
Sbjct: 157 IPYLGDLGDISTGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFTGTFGALAVMTII 216

Query: 182 SVVLGRTFHYVDDILPFRFGESDLPVDDIAAVCLLIYFGVSTLIEAASGDGXXXXXXXXX 361
           SVVLGRTFHYVD+ILPFR GE+DLPVDDIAAVCLL+YFGVSTLI+A+SGDG         
Sbjct: 217 SVVLGRTFHYVDEILPFRLGETDLPVDDIAAVCLLVYFGVSTLIDASSGDGLKAEDEQKE 276

Query: 362 XXXXVSEFSGNGAGLLA 412
               VSEFSGNGAG+LA
Sbjct: 277 AELAVSEFSGNGAGILA 293


>emb|CBI34418.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score =  211 bits (536), Expect = 6e-53
 Identities = 106/135 (78%), Positives = 115/135 (85%)
 Frame = +2

Query: 8   YFGDLGDISTGFASAFLLIFFSELGDKTFFIAALLAARNSGTVIFIGTFSALAAMTIISV 187
           Y GDLGDISTGF SAFLLIFFSELGDKTFFIAALLAARNSG V+FIGTF ALA MTIISV
Sbjct: 170 YLGDLGDISTGFVSAFLLIFFSELGDKTFFIAALLAARNSGAVVFIGTFGALATMTIISV 229

Query: 188 VLGRTFHYVDDILPFRFGESDLPVDDIAAVCLLIYFGVSTLIEAASGDGXXXXXXXXXXX 367
           VLGRTFHYVD+ILPFRFGE+DLP+DDIAAVCLL+YFGVSTL+EA S +G           
Sbjct: 230 VLGRTFHYVDEILPFRFGETDLPIDDIAAVCLLVYFGVSTLLEANSSNGLKAEEEQKEAE 289

Query: 368 XXVSEFSGNGAGLLA 412
             VSEFSGNGAG+L+
Sbjct: 290 IAVSEFSGNGAGILS 304


>ref|XP_002272191.1| PREDICTED: GDT1-like protein 1, chloroplastic [Vitis vinifera]
          Length = 260

 Score =  211 bits (536), Expect = 6e-53
 Identities = 106/135 (78%), Positives = 115/135 (85%)
 Frame = +2

Query: 8   YFGDLGDISTGFASAFLLIFFSELGDKTFFIAALLAARNSGTVIFIGTFSALAAMTIISV 187
           Y GDLGDISTGF SAFLLIFFSELGDKTFFIAALLAARNSG V+FIGTF ALA MTIISV
Sbjct: 37  YLGDLGDISTGFVSAFLLIFFSELGDKTFFIAALLAARNSGAVVFIGTFGALATMTIISV 96

Query: 188 VLGRTFHYVDDILPFRFGESDLPVDDIAAVCLLIYFGVSTLIEAASGDGXXXXXXXXXXX 367
           VLGRTFHYVD+ILPFRFGE+DLP+DDIAAVCLL+YFGVSTL+EA S +G           
Sbjct: 97  VLGRTFHYVDEILPFRFGETDLPIDDIAAVCLLVYFGVSTLLEANSSNGLKAEEEQKEAE 156

Query: 368 XXVSEFSGNGAGLLA 412
             VSEFSGNGAG+L+
Sbjct: 157 IAVSEFSGNGAGILS 171


>ref|NP_001241025.1| uncharacterized protein LOC100809618 [Glycine max]
           gi|255636411|gb|ACU18544.1| unknown [Glycine max]
          Length = 347

 Score =  210 bits (534), Expect = 1e-52
 Identities = 104/134 (77%), Positives = 117/134 (87%)
 Frame = +2

Query: 11  FGDLGDISTGFASAFLLIFFSELGDKTFFIAALLAARNSGTVIFIGTFSALAAMTIISVV 190
           FGD+GD+STGFASAFLLIFFSELGDKTFFIAALLAARNS  V+FIGTF ALAAMT+ISVV
Sbjct: 125 FGDIGDLSTGFASAFLLIFFSELGDKTFFIAALLAARNSAGVVFIGTFGALAAMTLISVV 184

Query: 191 LGRTFHYVDDILPFRFGESDLPVDDIAAVCLLIYFGVSTLIEAASGDGXXXXXXXXXXXX 370
           LGRTFHYVD+ILPFRFGE+DLP+DDIAAVCLL+YFGVSTL++A+S DG            
Sbjct: 185 LGRTFHYVDEILPFRFGETDLPIDDIAAVCLLVYFGVSTLLDASSSDGQKSDEEQKEAEL 244

Query: 371 XVSEFSGNGAGLLA 412
            VSEFSGNGAG+L+
Sbjct: 245 AVSEFSGNGAGILS 258


>ref|XP_003611045.1| Transmembrane protein [Medicago truncatula]
           gi|355512380|gb|AES94003.1| Transmembrane protein
           [Medicago truncatula]
          Length = 403

 Score =  207 bits (527), Expect = 7e-52
 Identities = 100/137 (72%), Positives = 118/137 (86%)
 Frame = +2

Query: 2   LPYFGDLGDISTGFASAFLLIFFSELGDKTFFIAALLAARNSGTVIFIGTFSALAAMTII 181
           +P FGD+GD+STGFASAFLLIFFSELGDKTFFIAALLAARNS +V+F+GTF ALAAMT+I
Sbjct: 180 IPIFGDVGDLSTGFASAFLLIFFSELGDKTFFIAALLAARNSASVVFVGTFGALAAMTVI 239

Query: 182 SVVLGRTFHYVDDILPFRFGESDLPVDDIAAVCLLIYFGVSTLIEAASGDGXXXXXXXXX 361
           SV LGRTFHYVD++LPFRFGE+DLP+DDIAAVCLL+YFGVSTL++A+S D          
Sbjct: 240 SVALGRTFHYVDELLPFRFGETDLPIDDIAAVCLLVYFGVSTLLDASSSDSQKSDDEQKE 299

Query: 362 XXXXVSEFSGNGAGLLA 412
               VS+FSG+GAG+LA
Sbjct: 300 AELAVSDFSGDGAGILA 316


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