BLASTX nr result

ID: Coptis24_contig00013607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013607
         (860 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270801.2| PREDICTED: uncharacterized protein LOC100243...    73   9e-11
ref|XP_002514895.1| conserved hypothetical protein [Ricinus comm...    69   1e-09
gb|ACH87180.1| unknown protein [Camellia sinensis]                     69   2e-09
ref|XP_003630485.1| hypothetical protein MTR_8g097040 [Medicago ...    68   3e-09
ref|XP_003630483.1| hypothetical protein MTR_8g097040 [Medicago ...    68   3e-09

>ref|XP_002270801.2| PREDICTED: uncharacterized protein LOC100243721 [Vitis vinifera]
          Length = 127

 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 37/53 (69%), Positives = 41/53 (77%), Gaps = 4/53 (7%)
 Frame = -2

Query: 520 SVTFVIGFILMPWVLGLVIVLYFVGIVSNLSMLGRAILC----PCPPAVSSPS 374
           SVTF IGFILMPWVLGLV+V YFVGIVSNLS+LGRAI+C    P  P    P+
Sbjct: 71  SVTFFIGFILMPWVLGLVMVFYFVGIVSNLSVLGRAIICQATAPAKPRKEIPA 123


>ref|XP_002514895.1| conserved hypothetical protein [Ricinus communis]
           gi|223545946|gb|EEF47449.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 134

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 47/130 (36%), Positives = 55/130 (42%), Gaps = 6/130 (4%)
 Frame = -2

Query: 745 MRSSQEQHQSRLFYDLCTLVLTIINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 566
           M  SQE HQSR+FY+L  LVL ++                                    
Sbjct: 1   MMRSQEDHQSRVFYELSALVLNLLRSPPSSPSSSSAHFSDQSPSESQRRRRPSLSQISPA 60

Query: 565 XXXXXXXXXXXXXXG--SVTFVIGFILMPWVLGLVIVLYFVGIVSNLSMLGRAILC---- 404
                            SVTF IGFILMPWVLGLV+V Y  G+VS +SMLGR+ LC    
Sbjct: 61  GFASLMLGISLALMLCGSVTFFIGFILMPWVLGLVMVFYVAGVVSTISMLGRSFLCHAMT 120

Query: 403 PCPPAVSSPS 374
           P  P    PS
Sbjct: 121 PPSPRKEIPS 130


>gb|ACH87180.1| unknown protein [Camellia sinensis]
          Length = 129

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 35/53 (66%), Positives = 40/53 (75%), Gaps = 4/53 (7%)
 Frame = -2

Query: 520 SVTFVIGFILMPWVLGLVIVLYFVGIVSNLSMLGRAILC----PCPPAVSSPS 374
           SVTF IGF+LMPWVLGLV+V Y VGIVS+LSM+GRAILC    P  P    P+
Sbjct: 73  SVTFFIGFMLMPWVLGLVMVFYVVGIVSSLSMIGRAILCHTTSPASPRKEVPA 125


>ref|XP_003630485.1| hypothetical protein MTR_8g097040 [Medicago truncatula]
           gi|355524507|gb|AET04961.1| hypothetical protein
           MTR_8g097040 [Medicago truncatula]
          Length = 119

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 32/48 (66%), Positives = 38/48 (79%)
 Frame = -2

Query: 520 SVTFVIGFILMPWVLGLVIVLYFVGIVSNLSMLGRAILCPCPPAVSSP 377
           SVTFVIGF+LMPWV+GLV+V Y  G+VS LS+LGR+ILC   P   SP
Sbjct: 67  SVTFVIGFMLMPWVIGLVMVFYVAGVVSFLSVLGRSILCFASPRKDSP 114


>ref|XP_003630483.1| hypothetical protein MTR_8g097040 [Medicago truncatula]
           gi|355524505|gb|AET04959.1| hypothetical protein
           MTR_8g097040 [Medicago truncatula]
          Length = 177

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 32/48 (66%), Positives = 38/48 (79%)
 Frame = -2

Query: 520 SVTFVIGFILMPWVLGLVIVLYFVGIVSNLSMLGRAILCPCPPAVSSP 377
           SVTFVIGF+LMPWV+GLV+V Y  G+VS LS+LGR+ILC   P   SP
Sbjct: 79  SVTFVIGFMLMPWVIGLVMVFYVAGVVSFLSVLGRSILCFASPRKDSP 126


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