BLASTX nr result
ID: Coptis24_contig00013595
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00013595 (693 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004149520.1| PREDICTED: transcription factor PIF5-like [C... 97 4e-21 ref|XP_002302124.1| predicted protein [Populus trichocarpa] gi|2... 83 2e-18 ref|XP_003532070.1| PREDICTED: transcription factor PIF5-like [G... 81 1e-17 ref|XP_003551947.1| PREDICTED: transcription factor PIF5-like [G... 78 3e-17 emb|CBI22065.3| unnamed protein product [Vitis vinifera] 93 4e-17 >ref|XP_004149520.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus] gi|449505798|ref|XP_004162571.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus] Length = 550 Score = 97.4 bits (241), Expect(2) = 4e-21 Identities = 49/83 (59%), Positives = 62/83 (74%), Gaps = 3/83 (3%) Frame = -3 Query: 634 VQHYISRMGMGMG-THHSMPSIHSPMQLPRLPLVNQTIP-ALSPNQPPTC-PSVLNGVNF 464 VQHY+SR+ MGMG SMPSIH+PMQLPR+P+V+Q++ A +PNQP C P + N +N+ Sbjct: 421 VQHYMSRVAMGMGMAQPSMPSIHNPMQLPRVPIVDQSVSVAPTPNQPMMCQPQMFNPMNY 480 Query: 463 QNRMQNTDFSLSYARHMGFHHMQ 395 QN+MQN YAR MGFHHMQ Sbjct: 481 QNQMQNPALQEQYARLMGFHHMQ 503 Score = 30.0 bits (66), Expect(2) = 4e-21 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Frame = -2 Query: 335 HHMQ-TPQSLNIFGYGSQIAQQSPKVGLPSSSSATCHGGTPVDNAPSSKLG 186 HHMQ T Q +N+F + QS P +S GG+ ++ + LG Sbjct: 500 HHMQPTSQPINVFRFCPSAVLQSQPAAAPGPASGPTAGGSITNDIVNGNLG 550 >ref|XP_002302124.1| predicted protein [Populus trichocarpa] gi|222843850|gb|EEE81397.1| predicted protein [Populus trichocarpa] Length = 233 Score = 82.8 bits (203), Expect(2) = 2e-18 Identities = 47/87 (54%), Positives = 61/87 (70%), Gaps = 4/87 (4%) Frame = -3 Query: 634 VQHYISRMGMGMGTHHS-MPSIHSPMQLPRLPLVNQTIPALSP--NQPPTCPS-VLNGVN 467 VQH++SRMGMGMG +PS+ +PM LPR+PLV+Q+I +++P NQ C + VLN VN Sbjct: 104 VQHFMSRMGMGMGMGPPPLPSMQNPMHLPRVPLVDQSI-SMTPTQNQAVICQTPVLNPVN 162 Query: 466 FQNRMQNTDFSLSYARHMGFHHMQTPQ 386 +QN+MQN FS YAR MGFH Q Sbjct: 163 YQNQMQNPTFSDQYARFMGFHMQAASQ 189 Score = 35.4 bits (80), Expect(2) = 2e-18 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = -2 Query: 332 HMQTP-QSLNIFGYGSQIAQQSPKVGLPSSSSATCHGGTPVDNAPSS 195 HMQ Q +N+F +GSQ QQ+ + P+S GT +AP S Sbjct: 183 HMQAASQPMNMFRFGSQTVQQNQMMAPPNSGGGPLSAGTAASDAPPS 229 >ref|XP_003532070.1| PREDICTED: transcription factor PIF5-like [Glycine max] Length = 266 Score = 81.3 bits (199), Expect(2) = 1e-17 Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 1/81 (1%) Frame = -3 Query: 634 VQHYISRMGMGMGTHHSMPSIHSPMQLPRLPLVNQTIPALSPNQPPTCPS-VLNGVNFQN 458 +QHY+S+MGMGM P IH+PMQLPR+PL + +PNQ C + +L N+QN Sbjct: 138 IQHYMSQMGMGMARPPFPPPIHNPMQLPRVPLDKSVSASQTPNQTLMCQNPILGAFNYQN 197 Query: 457 RMQNTDFSLSYARHMGFHHMQ 395 +MQN S Y R+MG+H MQ Sbjct: 198 QMQNPALSEQYVRYMGYHLMQ 218 Score = 34.7 bits (78), Expect(2) = 1e-17 Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Frame = -2 Query: 335 HHMQTP-QSLNIFGYGSQIAQQSPKVGLPSS-SSATCHGGTPVDNAPSSKLG 186 H MQ Q +N+F YG Q Q S + PSS SS G +D A S K+G Sbjct: 215 HLMQNASQPMNVFRYGPQGVQHSQTMITPSSNSSGNMSGAANIDEAVSGKMG 266 >ref|XP_003551947.1| PREDICTED: transcription factor PIF5-like [Glycine max] Length = 397 Score = 77.8 bits (190), Expect(2) = 3e-17 Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 1/81 (1%) Frame = -3 Query: 634 VQHYISRMGMGMGTHHSMPSIHSPMQLPRLPLVNQTIPALSPNQPPTCPS-VLNGVNFQN 458 +QHY+S+MGMGM T P IH+PMQLPRLPL + +PNQ + +L N+ N Sbjct: 271 IQHYMSQMGMGMATP-PFPPIHNPMQLPRLPLDQSVSASQTPNQTLMSQNPILGAFNYHN 329 Query: 457 RMQNTDFSLSYARHMGFHHMQ 395 +MQN S YAR+MG+H MQ Sbjct: 330 QMQNPALSEQYARYMGYHLMQ 350 Score = 36.6 bits (83), Expect(2) = 3e-17 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%) Frame = -2 Query: 335 HHMQTP-QSLNIFGYGSQIAQQSPKVGLPSSSSATCHGGTPVDNAPSSKLG 186 H MQ Q +N+F YG Q + S + PS+SS G +D A S K+G Sbjct: 347 HLMQNASQPMNVFRYGPQGVRHSQTMITPSNSSGNMSGAANIDEAVSGKMG 397 >emb|CBI22065.3| unnamed protein product [Vitis vinifera] Length = 544 Score = 93.2 bits (230), Expect = 4e-17 Identities = 48/84 (57%), Positives = 62/84 (73%), Gaps = 2/84 (2%) Frame = -3 Query: 634 VQHYISRMGMGMGTHHSMPSIHSPMQLPRLPLVNQTIPALSP-NQPPTCPS-VLNGVNFQ 461 VQHY++RMGMGM +PSIH+PM LPR+ LV+Q+ A+ P NQPP C + VLN VN+Q Sbjct: 408 VQHYMARMGMGM-CPPPLPSIHNPMHLPRVQLVDQSTSAVPPSNQPPICQTPVLNPVNYQ 466 Query: 460 NRMQNTDFSLSYARHMGFHHMQTP 389 N+M N +F +A +MGFH MQTP Sbjct: 467 NQMPNPNFPEQFAHYMGFHPMQTP 490