BLASTX nr result

ID: Coptis24_contig00013595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013595
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149520.1| PREDICTED: transcription factor PIF5-like [C...    97   4e-21
ref|XP_002302124.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-18
ref|XP_003532070.1| PREDICTED: transcription factor PIF5-like [G...    81   1e-17
ref|XP_003551947.1| PREDICTED: transcription factor PIF5-like [G...    78   3e-17
emb|CBI22065.3| unnamed protein product [Vitis vinifera]               93   4e-17

>ref|XP_004149520.1| PREDICTED: transcription factor PIF5-like [Cucumis sativus]
           gi|449505798|ref|XP_004162571.1| PREDICTED:
           transcription factor PIF5-like [Cucumis sativus]
          Length = 550

 Score = 97.4 bits (241), Expect(2) = 4e-21
 Identities = 49/83 (59%), Positives = 62/83 (74%), Gaps = 3/83 (3%)
 Frame = -3

Query: 634 VQHYISRMGMGMG-THHSMPSIHSPMQLPRLPLVNQTIP-ALSPNQPPTC-PSVLNGVNF 464
           VQHY+SR+ MGMG    SMPSIH+PMQLPR+P+V+Q++  A +PNQP  C P + N +N+
Sbjct: 421 VQHYMSRVAMGMGMAQPSMPSIHNPMQLPRVPIVDQSVSVAPTPNQPMMCQPQMFNPMNY 480

Query: 463 QNRMQNTDFSLSYARHMGFHHMQ 395
           QN+MQN      YAR MGFHHMQ
Sbjct: 481 QNQMQNPALQEQYARLMGFHHMQ 503



 Score = 30.0 bits (66), Expect(2) = 4e-21
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = -2

Query: 335 HHMQ-TPQSLNIFGYGSQIAQQSPKVGLPSSSSATCHGGTPVDNAPSSKLG 186
           HHMQ T Q +N+F +      QS     P  +S    GG+  ++  +  LG
Sbjct: 500 HHMQPTSQPINVFRFCPSAVLQSQPAAAPGPASGPTAGGSITNDIVNGNLG 550


>ref|XP_002302124.1| predicted protein [Populus trichocarpa] gi|222843850|gb|EEE81397.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score = 82.8 bits (203), Expect(2) = 2e-18
 Identities = 47/87 (54%), Positives = 61/87 (70%), Gaps = 4/87 (4%)
 Frame = -3

Query: 634 VQHYISRMGMGMGTHHS-MPSIHSPMQLPRLPLVNQTIPALSP--NQPPTCPS-VLNGVN 467
           VQH++SRMGMGMG     +PS+ +PM LPR+PLV+Q+I +++P  NQ   C + VLN VN
Sbjct: 104 VQHFMSRMGMGMGMGPPPLPSMQNPMHLPRVPLVDQSI-SMTPTQNQAVICQTPVLNPVN 162

Query: 466 FQNRMQNTDFSLSYARHMGFHHMQTPQ 386
           +QN+MQN  FS  YAR MGFH     Q
Sbjct: 163 YQNQMQNPTFSDQYARFMGFHMQAASQ 189



 Score = 35.4 bits (80), Expect(2) = 2e-18
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -2

Query: 332 HMQTP-QSLNIFGYGSQIAQQSPKVGLPSSSSATCHGGTPVDNAPSS 195
           HMQ   Q +N+F +GSQ  QQ+  +  P+S       GT   +AP S
Sbjct: 183 HMQAASQPMNMFRFGSQTVQQNQMMAPPNSGGGPLSAGTAASDAPPS 229


>ref|XP_003532070.1| PREDICTED: transcription factor PIF5-like [Glycine max]
          Length = 266

 Score = 81.3 bits (199), Expect(2) = 1e-17
 Identities = 39/81 (48%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
 Frame = -3

Query: 634 VQHYISRMGMGMGTHHSMPSIHSPMQLPRLPLVNQTIPALSPNQPPTCPS-VLNGVNFQN 458
           +QHY+S+MGMGM      P IH+PMQLPR+PL      + +PNQ   C + +L   N+QN
Sbjct: 138 IQHYMSQMGMGMARPPFPPPIHNPMQLPRVPLDKSVSASQTPNQTLMCQNPILGAFNYQN 197

Query: 457 RMQNTDFSLSYARHMGFHHMQ 395
           +MQN   S  Y R+MG+H MQ
Sbjct: 198 QMQNPALSEQYVRYMGYHLMQ 218



 Score = 34.7 bits (78), Expect(2) = 1e-17
 Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = -2

Query: 335 HHMQTP-QSLNIFGYGSQIAQQSPKVGLPSS-SSATCHGGTPVDNAPSSKLG 186
           H MQ   Q +N+F YG Q  Q S  +  PSS SS    G   +D A S K+G
Sbjct: 215 HLMQNASQPMNVFRYGPQGVQHSQTMITPSSNSSGNMSGAANIDEAVSGKMG 266


>ref|XP_003551947.1| PREDICTED: transcription factor PIF5-like [Glycine max]
          Length = 397

 Score = 77.8 bits (190), Expect(2) = 3e-17
 Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
 Frame = -3

Query: 634 VQHYISRMGMGMGTHHSMPSIHSPMQLPRLPLVNQTIPALSPNQPPTCPS-VLNGVNFQN 458
           +QHY+S+MGMGM T    P IH+PMQLPRLPL      + +PNQ     + +L   N+ N
Sbjct: 271 IQHYMSQMGMGMATP-PFPPIHNPMQLPRLPLDQSVSASQTPNQTLMSQNPILGAFNYHN 329

Query: 457 RMQNTDFSLSYARHMGFHHMQ 395
           +MQN   S  YAR+MG+H MQ
Sbjct: 330 QMQNPALSEQYARYMGYHLMQ 350



 Score = 36.6 bits (83), Expect(2) = 3e-17
 Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -2

Query: 335 HHMQTP-QSLNIFGYGSQIAQQSPKVGLPSSSSATCHGGTPVDNAPSSKLG 186
           H MQ   Q +N+F YG Q  + S  +  PS+SS    G   +D A S K+G
Sbjct: 347 HLMQNASQPMNVFRYGPQGVRHSQTMITPSNSSGNMSGAANIDEAVSGKMG 397


>emb|CBI22065.3| unnamed protein product [Vitis vinifera]
          Length = 544

 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 48/84 (57%), Positives = 62/84 (73%), Gaps = 2/84 (2%)
 Frame = -3

Query: 634 VQHYISRMGMGMGTHHSMPSIHSPMQLPRLPLVNQTIPALSP-NQPPTCPS-VLNGVNFQ 461
           VQHY++RMGMGM     +PSIH+PM LPR+ LV+Q+  A+ P NQPP C + VLN VN+Q
Sbjct: 408 VQHYMARMGMGM-CPPPLPSIHNPMHLPRVQLVDQSTSAVPPSNQPPICQTPVLNPVNYQ 466

Query: 460 NRMQNTDFSLSYARHMGFHHMQTP 389
           N+M N +F   +A +MGFH MQTP
Sbjct: 467 NQMPNPNFPEQFAHYMGFHPMQTP 490


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