BLASTX nr result

ID: Coptis24_contig00013569 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013569
         (1116 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana] ...   181   3e-43
emb|CBI31915.3| unnamed protein product [Vitis vinifera]              181   3e-43
ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262...   181   3e-43
emb|CAN71257.1| hypothetical protein VITISV_043224 [Vitis vinifera]   179   1e-42
ref|XP_002863334.1| hypothetical protein ARALYDRAFT_494215 [Arab...   177   4e-42

>ref|NP_199569.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9758786|dbj|BAB09084.1| unnamed protein product
           [Arabidopsis thaliana] gi|16974605|gb|AAL31205.1|
           AT5g47580/MNJ7_17 [Arabidopsis thaliana]
           gi|23506171|gb|AAN31097.1| At5g47580/MNJ7_17
           [Arabidopsis thaliana] gi|332008151|gb|AED95534.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 748

 Score =  181 bits (459), Expect = 3e-43
 Identities = 109/306 (35%), Positives = 150/306 (49%), Gaps = 13/306 (4%)
 Frame = +2

Query: 104 NGTIEGVNYSSPVPVIGLYIAGASILCALLMLYDIGCGFWDIKELITCRSFKLISLTAKR 283
           +G +    +S P+P IG+Y+A AS++C L M  D+  GF                   K 
Sbjct: 9   HGDLNDAEFSKPLPSIGIYVAVASLICGLAMAADLIHGFRH----------------RKF 52

Query: 284 WLPCKSFQLNSLTLTLLGIATKLPVDLTTSMPSQKDQLSKLTGTAFICISMAFLVPSLGV 463
           W PCK F LN+ +LT + +  KL VDL TSMPS++DQL+KL+ T F+C  M   +PSLG+
Sbjct: 53  WFPCKFFSLNATSLTFIAVGIKLSVDLNTSMPSRQDQLAKLSSTVFVCTVMGNSMPSLGI 112

Query: 464 SSESECSTNLWALTIFVFTVAVNICIQLHTGVIVFFFKEHIAXXXXXXXXXXXXWYISSI 643
              ++   NL AL I V T  VNICIQL TG I  F +EH               + ++ 
Sbjct: 113 MDNNDLLMNLMALGILVITDVVNICIQLGTGAIYVFSEEHFLVVLLMLLMLMILCFSATT 172

Query: 644 TKAQKRITSDRYNTLFAKG-----------SSSMLDRLKLCYLYAYCSDPQFNISIHPIN 790
               KRI   +YN  +              +  +   L   ++ A+ S PQF ++     
Sbjct: 173 VPTTKRILESKYNKRYDVAMKCPLATERTVAKKIQQDLSKFWMMAHTSSPQFVMARSVTC 232

Query: 791 AAIGTVCLTCLGIVLEATFRSIIL--KQLKFCEGDSDYKWSMILIVSAQIITVIVGTFAV 964
            A G  CL     + EA  RS  L  + L FC GDSDYKWS  L++  Q  TV +GT A 
Sbjct: 233 TASGFFCLLSAITLGEAMVRSYFLRPRSLGFCHGDSDYKWSTSLVLVCQTTTVAIGTIAP 292

Query: 965 VFRWLS 982
             RW +
Sbjct: 293 AIRWFT 298


>emb|CBI31915.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  181 bits (459), Expect = 3e-43
 Identities = 110/306 (35%), Positives = 159/306 (51%), Gaps = 14/306 (4%)
 Frame = +2

Query: 101 INGTIEGVNYSSPVPVIGLYIAGASILCALLMLYDIGCGFWDIKELITCRSFKLISLTAK 280
           I+G++   N++ P+P IG+Y+A AS++C+L M  D                   ++L  K
Sbjct: 8   IDGSVNDSNFNEPMPWIGIYVAAASLVCSLAMGADA-----------------FLALRHK 50

Query: 281 R-WLPCKSFQLNSLTLTLLGIATKLPVDLTTSMPSQKDQLSKLTGTAFICISMAFLVPSL 457
           + W PCK F LN+ +LT++ +ATKL VDL TSMP  +DQLSKL+ T  +C  M   +PS+
Sbjct: 51  KFWFPCKFFSLNATSLTIIAVATKLSVDLNTSMPRCQDQLSKLSSTVMMCTVMGNFMPSI 110

Query: 458 GVSSESECSTNLWALTIFVFTVAVNICIQLHTGVIVFFFKEHIAXXXXXXXXXXXXWYIS 637
           G     E  +N+ AL I V T+ VN+CIQ+ TGVI  ++KEH               + +
Sbjct: 111 GTMENKEVFSNVIALGILVITLMVNVCIQMGTGVIYVYWKEHAVVMFIMLVLLLILSFSA 170

Query: 638 SITKAQKRITSDRYNTLF---AKGSSSMLD---------RLKLCYLYAYCSDPQFNISIH 781
                 K     +Y   +    K SS+  D          L   ++ A+ S PQF I   
Sbjct: 171 LTVPTTKHYFELKYRKKYEIAVKESSNETDIPVFKKLREDLMKYWIMAHSSCPQFVIGRS 230

Query: 782 PINAAIGTVCLTCLGIVLEATFRSIILK-QLKFCEGDSDYKWSMILIVSAQIITVIVGTF 958
               A G +CL    I++EA  RS ++    KFC G+SDYKWS+ LI+ +Q + V VGT 
Sbjct: 231 VTCTASGALCLLSAAILVEAWIRSYLMPWSFKFCSGESDYKWSVTLILISQTVAVGVGTI 290

Query: 959 AVVFRW 976
              FRW
Sbjct: 291 GPAFRW 296


>ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262529 [Vitis vinifera]
          Length = 754

 Score =  181 bits (459), Expect = 3e-43
 Identities = 110/306 (35%), Positives = 159/306 (51%), Gaps = 14/306 (4%)
 Frame = +2

Query: 101 INGTIEGVNYSSPVPVIGLYIAGASILCALLMLYDIGCGFWDIKELITCRSFKLISLTAK 280
           I+G++   N++ P+P IG+Y+A AS++C+L M  D                   ++L  K
Sbjct: 8   IDGSVNDSNFNEPMPWIGIYVAAASLVCSLAMGADA-----------------FLALRHK 50

Query: 281 R-WLPCKSFQLNSLTLTLLGIATKLPVDLTTSMPSQKDQLSKLTGTAFICISMAFLVPSL 457
           + W PCK F LN+ +LT++ +ATKL VDL TSMP  +DQLSKL+ T  +C  M   +PS+
Sbjct: 51  KFWFPCKFFSLNATSLTIIAVATKLSVDLNTSMPRCQDQLSKLSSTVMMCTVMGNFMPSI 110

Query: 458 GVSSESECSTNLWALTIFVFTVAVNICIQLHTGVIVFFFKEHIAXXXXXXXXXXXXWYIS 637
           G     E  +N+ AL I V T+ VN+CIQ+ TGVI  ++KEH               + +
Sbjct: 111 GTMENKEVFSNVIALGILVITLMVNVCIQMGTGVIYVYWKEHAVVMFIMLVLLLILSFSA 170

Query: 638 SITKAQKRITSDRYNTLF---AKGSSSMLD---------RLKLCYLYAYCSDPQFNISIH 781
                 K     +Y   +    K SS+  D          L   ++ A+ S PQF I   
Sbjct: 171 LTVPTTKHYFELKYRKKYEIAVKESSNETDIPVFKKLREDLMKYWIMAHSSCPQFVIGRS 230

Query: 782 PINAAIGTVCLTCLGIVLEATFRSIILK-QLKFCEGDSDYKWSMILIVSAQIITVIVGTF 958
               A G +CL    I++EA  RS ++    KFC G+SDYKWS+ LI+ +Q + V VGT 
Sbjct: 231 VTCTASGALCLLSAAILVEAWIRSYLMPWSFKFCSGESDYKWSVTLILISQTVAVGVGTI 290

Query: 959 AVVFRW 976
              FRW
Sbjct: 291 GPAFRW 296


>emb|CAN71257.1| hypothetical protein VITISV_043224 [Vitis vinifera]
          Length = 754

 Score =  179 bits (454), Expect = 1e-42
 Identities = 110/305 (36%), Positives = 157/305 (51%), Gaps = 13/305 (4%)
 Frame = +2

Query: 101 INGTIEGVNYSSPVPVIGLYIAGASILCALLMLYDIGCGFWDIKELITCRSFKLISLTAK 280
           I+G++   N++ P+P IG+Y A AS++C+L M  D    F  ++               K
Sbjct: 8   IDGSVNDSNFNXPMPWIGIYXAAASLVCSLAMGAD---AFXALRX-------------KK 51

Query: 281 RWLPCKSFQLNSLTLTLLGIATKLPVDLTTSMPSQKDQLSKLTGTAFICISMAFLVPSLG 460
            W PCK F LN+ +LT++ +ATKL VDL TSMP  +DQLSKL+ T  +C  M   +PS+G
Sbjct: 52  FWFPCKFFSLNATSLTIIAVATKLSVDLNTSMPRCQDQLSKLSSTVXMCTVMGNFMPSIG 111

Query: 461 VSSESECSTNLWALTIFVFTVAVNICIQLHTGVIVFFFKEHIAXXXXXXXXXXXXWYISS 640
                E  +N+ AL I V T+ VN+CIQ+ TGVI  ++KEH               + + 
Sbjct: 112 TMENKEVFSNVIALGILVITLMVNVCIQMGTGVIYVYWKEHAVVMFIMLVLLLILSFSAL 171

Query: 641 ITKAQKRITSDRYNTLF---AKGSSSMLD---------RLKLCYLYAYCSDPQFNISIHP 784
                K     +Y   +    K SS+  D          L   ++ A+ S PQF I    
Sbjct: 172 TVPTTKHYFELKYRKKYEIAVKESSNETDIPVFKKLREDLMKYWIMAHSSXPQFVIGRSV 231

Query: 785 INAAIGTVCLTCLGIVLEATFRSIILK-QLKFCEGDSDYKWSMILIVSAQIITVIVGTFA 961
              A G +CL    I++EA  RS ++    KFC G+SDYKWS+ LI+ +Q + V VGT  
Sbjct: 232 TCTASGALCLLSAAILVEAWIRSYLMPWSFKFCSGESDYKWSVTLILISQTVAVGVGTIG 291

Query: 962 VVFRW 976
             FRW
Sbjct: 292 PAFRW 296


>ref|XP_002863334.1| hypothetical protein ARALYDRAFT_494215 [Arabidopsis lyrata subsp.
           lyrata] gi|297309169|gb|EFH39593.1| hypothetical protein
           ARALYDRAFT_494215 [Arabidopsis lyrata subsp. lyrata]
          Length = 748

 Score =  177 bits (449), Expect = 4e-42
 Identities = 107/306 (34%), Positives = 149/306 (48%), Gaps = 13/306 (4%)
 Frame = +2

Query: 104 NGTIEGVNYSSPVPVIGLYIAGASILCALLMLYDIGCGFWDIKELITCRSFKLISLTAKR 283
           +G +    +S P+P+IG+Y+A AS++C L M  D+  GF                   K 
Sbjct: 9   HGDLNDAEFSKPLPLIGIYVAVASLICGLAMAADLIHGFRH----------------RKF 52

Query: 284 WLPCKSFQLNSLTLTLLGIATKLPVDLTTSMPSQKDQLSKLTGTAFICISMAFLVPSLGV 463
           W PCK F LN+ +LT + +  KL VDL TSMPS++DQL+KL+ T F+C  M   +PSLG+
Sbjct: 53  WFPCKFFSLNATSLTFIAVGIKLSVDLNTSMPSRQDQLAKLSSTVFVCTVMGNSMPSLGI 112

Query: 464 SSESECSTNLWALTIFVFTVAVNICIQLHTGVIVFFFKEHIAXXXXXXXXXXXXWYISSI 643
              ++   NL AL I V T  VNICIQL TG I  F +EH               + ++ 
Sbjct: 113 MDNNDLLMNLMALGILVITDVVNICIQLGTGAIYVFSEEHFLVVLLMLLMLMILCFSATT 172

Query: 644 TKAQKRITSDRYNTLFAKG-----------SSSMLDRLKLCYLYAYCSDPQFNISIHPIN 790
               KRI   +Y   +              +  +   L   ++ A+ S PQF ++     
Sbjct: 173 VPTTKRILEAKYKKRYDVAMKCPLATERTVAKKIQQDLSKFWMMAHTSSPQFVMARSVTC 232

Query: 791 AAIGTVCLTCLGIVLEATFRSIIL--KQLKFCEGDSDYKWSMILIVSAQIITVIVGTFAV 964
            A G  CL     + EA  RS  L  + L FC GDSDYKWS  L++  Q   V +GT A 
Sbjct: 233 TASGFFCLLSAITLGEAMVRSYFLRPRSLGFCHGDSDYKWSTSLVLVCQTTAVTIGTIAP 292

Query: 965 VFRWLS 982
             RW +
Sbjct: 293 AIRWFT 298


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