BLASTX nr result

ID: Coptis24_contig00013496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013496
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270028.1| PREDICTED: biogenesis of lysosome-related or...   162   6e-38
gb|AFK45925.1| unknown [Lotus japonicus]                              154   1e-35
gb|AFK45589.1| unknown [Lotus japonicus]                              154   1e-35
ref|XP_003544921.1| PREDICTED: biogenesis of lysosome-related or...   150   2e-34
ref|NP_001235606.1| uncharacterized protein LOC100305965 [Glycin...   148   1e-33

>ref|XP_002270028.1| PREDICTED: biogenesis of lysosome-related organelles complex 1
           subunit 1 [Vitis vinifera] gi|297745789|emb|CBI15845.3|
           unnamed protein product [Vitis vinifera]
          Length = 149

 Score =  162 bits (410), Expect = 6e-38
 Identities = 81/123 (65%), Positives = 96/123 (78%)
 Frame = -3

Query: 585 PQGLESSLHQLLHDHNQTSXXXXXXXXXXXXXXXXXAIRVSDLLVETVNGGVQVSFLNEK 406
           P GLE+SL QL+ DH+QTS                 A+RVSDLLV+TVNGGVQ +F+NEK
Sbjct: 26  PSGLEASLLQLIQDHHQTSLKLRDETEKAKNDAIRTAMRVSDLLVDTVNGGVQEAFINEK 85

Query: 405 RIELEIRALAATVLRYTKQTDQWLAASHSINSALKEIGDFENWMKIMDYDCKSINVAIRN 226
           RIELE RAL ATV+R+ KQT QWLAASH+IN+A+KEIGDFENWMK MD+DC+SIN AIRN
Sbjct: 86  RIELESRALTATVIRFAKQTHQWLAASHAINTAIKEIGDFENWMKTMDFDCRSINAAIRN 145

Query: 225 IYQ 217
           I+Q
Sbjct: 146 IHQ 148


>gb|AFK45925.1| unknown [Lotus japonicus]
          Length = 200

 Score =  154 bits (390), Expect = 1e-35
 Identities = 79/123 (64%), Positives = 92/123 (74%)
 Frame = -3

Query: 585 PQGLESSLHQLLHDHNQTSXXXXXXXXXXXXXXXXXAIRVSDLLVETVNGGVQVSFLNEK 406
           P+GLE+SLH LL  H+  S                 A RVSDLLVE VNGGVQ SF+N+K
Sbjct: 77  PKGLEASLHNLLQIHHHKSLILAHHTEKAKKDAMRKAERVSDLLVEAVNGGVQDSFVNQK 136

Query: 405 RIELEIRALAATVLRYTKQTDQWLAASHSINSALKEIGDFENWMKIMDYDCKSINVAIRN 226
           RIE EIRALA T+ R+ KQTDQWLAA+HS+N+ALKEIGDFENWMKIM+YDCKSI  AI+N
Sbjct: 137 RIEHEIRALAVTITRFMKQTDQWLAATHSLNTALKEIGDFENWMKIMEYDCKSITTAIQN 196

Query: 225 IYQ 217
           I+Q
Sbjct: 197 IHQ 199


>gb|AFK45589.1| unknown [Lotus japonicus]
          Length = 135

 Score =  154 bits (390), Expect = 1e-35
 Identities = 79/123 (64%), Positives = 92/123 (74%)
 Frame = -3

Query: 585 PQGLESSLHQLLHDHNQTSXXXXXXXXXXXXXXXXXAIRVSDLLVETVNGGVQVSFLNEK 406
           P+GLE+SLH LL  H+  S                 A RVSDLLVE VNGGVQ SF+N+K
Sbjct: 12  PKGLEASLHNLLQIHHHKSLILAHHTEKAKKDAMRKAERVSDLLVEAVNGGVQDSFVNQK 71

Query: 405 RIELEIRALAATVLRYTKQTDQWLAASHSINSALKEIGDFENWMKIMDYDCKSINVAIRN 226
           RIE EIRALA T+ R+ KQTDQWLAA+HS+N+ALKEIGDFENWMKIM+YDCKSI  AI+N
Sbjct: 72  RIEHEIRALAVTITRFMKQTDQWLAATHSLNTALKEIGDFENWMKIMEYDCKSITTAIQN 131

Query: 225 IYQ 217
           I+Q
Sbjct: 132 IHQ 134


>ref|XP_003544921.1| PREDICTED: biogenesis of lysosome-related organelles complex 1
           subunit 1-like [Glycine max]
          Length = 205

 Score =  150 bits (379), Expect = 2e-34
 Identities = 76/123 (61%), Positives = 92/123 (74%)
 Frame = -3

Query: 585 PQGLESSLHQLLHDHNQTSXXXXXXXXXXXXXXXXXAIRVSDLLVETVNGGVQVSFLNEK 406
           P+GLE+SL  L+  H+  S                 A RVSDLLVE VNGGVQ SF+N+K
Sbjct: 13  PKGLEASLQHLIDLHHHKSLVLAHHTDKAKKDAIRKAERVSDLLVEAVNGGVQDSFINQK 72

Query: 405 RIELEIRALAATVLRYTKQTDQWLAASHSINSALKEIGDFENWMKIMDYDCKSINVAIRN 226
           RIELEIR LAAT+ R+ KQTDQWLAA+H++N+ALKEIGDFENWMKIM++DCKSI  AI+N
Sbjct: 73  RIELEIRTLAATITRFMKQTDQWLAATHALNTALKEIGDFENWMKIMEFDCKSITTAIQN 132

Query: 225 IYQ 217
           I+Q
Sbjct: 133 IHQ 135


>ref|NP_001235606.1| uncharacterized protein LOC100305965 [Glycine max]
           gi|255627133|gb|ACU13911.1| unknown [Glycine max]
          Length = 128

 Score =  148 bits (373), Expect = 1e-33
 Identities = 74/123 (60%), Positives = 90/123 (73%)
 Frame = -3

Query: 585 PQGLESSLHQLLHDHNQTSXXXXXXXXXXXXXXXXXAIRVSDLLVETVNGGVQVSFLNEK 406
           P+GLE+SL  L+  H+  S                 A  VSDLLVE VNGGVQ SF+N+K
Sbjct: 5   PKGLEASLEHLIDLHHHKSLVLAHHTDKAKKDAIRKAEHVSDLLVEAVNGGVQDSFINQK 64

Query: 405 RIELEIRALAATVLRYTKQTDQWLAASHSINSALKEIGDFENWMKIMDYDCKSINVAIRN 226
           RIELEIR LA T+ R+ KQTDQWLAA+H++N+ALKEIGDFENWMK+M+YDCKSI  AI+N
Sbjct: 65  RIELEIRTLATTITRFMKQTDQWLAATHALNTALKEIGDFENWMKVMEYDCKSITTAIQN 124

Query: 225 IYQ 217
           I+Q
Sbjct: 125 IHQ 127


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