BLASTX nr result

ID: Coptis24_contig00013427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013427
         (568 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526645.1| PREDICTED: metal transporter Nramp5-like [Gl...   335   3e-90
ref|XP_002284556.1| PREDICTED: metal transporter Nramp5 [Vitis v...   335   4e-90
ref|NP_001234318.1| root-specific metal transporter [Solanum lyc...   333   1e-89
gb|AAU00158.1| root-specific metal transporter [Malus baccata]        332   3e-89
ref|XP_004149810.1| PREDICTED: metal transporter Nramp5-like [Cu...   328   4e-88

>ref|XP_003526645.1| PREDICTED: metal transporter Nramp5-like [Glycine max]
          Length = 544

 Score =  335 bits (859), Expect = 3e-90
 Identities = 168/188 (89%), Positives = 182/188 (96%)
 Frame = +3

Query: 3   LQAGANHRYELLWVILIGLIFALIIQSLAANHLGVSTGKHLAELCKAEYPILVKYCLWLL 182
           LQAGA+H+YELLWVILIGL+FALIIQSLAAN LGV+TGKHL+ELCKAEYP+LVKYCLWLL
Sbjct: 74  LQAGADHKYELLWVILIGLVFALIIQSLAAN-LGVTTGKHLSELCKAEYPLLVKYCLWLL 132

Query: 183 AEVAVIAADIPEVIGTAFALNILFHIPVWAGVLMTGFSTLLLLSLQRYGVRKLELLIAIL 362
           AE+AVIAADIPEVIGTAFALNILFHIPVWAGVL+TG STLL L LQR+GVRKLELLI+IL
Sbjct: 133 AELAVIAADIPEVIGTAFALNILFHIPVWAGVLITGCSTLLFLGLQRFGVRKLELLISIL 192

Query: 363 VFVMAGCYFGEMSYVKPPASDLLKGMFIPKLSGHGATGDAIALLGALVMPHNLFLHSALV 542
           VFVMAGC+FGEMSYVKPPAS +LKGMF+PKLSG GATGDAIALLGALVMPHNLFLHSALV
Sbjct: 193 VFVMAGCFFGEMSYVKPPASGVLKGMFVPKLSGQGATGDAIALLGALVMPHNLFLHSALV 252

Query: 543 LSRKIPSS 566
           LSRK+PSS
Sbjct: 253 LSRKVPSS 260


>ref|XP_002284556.1| PREDICTED: metal transporter Nramp5 [Vitis vinifera]
           gi|302141782|emb|CBI18985.3| unnamed protein product
           [Vitis vinifera]
          Length = 542

 Score =  335 bits (858), Expect = 4e-90
 Identities = 167/188 (88%), Positives = 180/188 (95%)
 Frame = +3

Query: 3   LQAGANHRYELLWVILIGLIFALIIQSLAANHLGVSTGKHLAELCKAEYPILVKYCLWLL 182
           LQAGANH +ELLWV+LIGLIFALIIQSLAAN LGVSTGKHL+ELCKAEYPI+VKYCLWLL
Sbjct: 70  LQAGANHGFELLWVVLIGLIFALIIQSLAAN-LGVSTGKHLSELCKAEYPIIVKYCLWLL 128

Query: 183 AEVAVIAADIPEVIGTAFALNILFHIPVWAGVLMTGFSTLLLLSLQRYGVRKLELLIAIL 362
           AE+AVIAADIPEVIGTAFALNILF +PVWAGVL TGFSTLLLL LQRYGVRKLELLIA+L
Sbjct: 129 AEIAVIAADIPEVIGTAFALNILFKVPVWAGVLFTGFSTLLLLGLQRYGVRKLELLIAVL 188

Query: 363 VFVMAGCYFGEMSYVKPPASDLLKGMFIPKLSGHGATGDAIALLGALVMPHNLFLHSALV 542
           VF+MAGC+FGEMSYVKPPA+ +LKGMFIPKL G GATGDAIALLGALVMPHNLFLHSALV
Sbjct: 189 VFIMAGCFFGEMSYVKPPATGVLKGMFIPKLKGQGATGDAIALLGALVMPHNLFLHSALV 248

Query: 543 LSRKIPSS 566
           LSRK+P+S
Sbjct: 249 LSRKVPNS 256


>ref|NP_001234318.1| root-specific metal transporter [Solanum lycopersicum]
           gi|30267434|gb|AAP21818.1| root-specific metal
           transporter [Solanum lycopersicum]
          Length = 530

 Score =  333 bits (854), Expect = 1e-89
 Identities = 169/188 (89%), Positives = 178/188 (94%)
 Frame = +3

Query: 3   LQAGANHRYELLWVILIGLIFALIIQSLAANHLGVSTGKHLAELCKAEYPILVKYCLWLL 182
           LQAGANHRYELLWVILIGLIFALIIQSLAAN LGVSTGKHL+ELC+AEYP+ VKYCLWLL
Sbjct: 66  LQAGANHRYELLWVILIGLIFALIIQSLAAN-LGVSTGKHLSELCRAEYPVFVKYCLWLL 124

Query: 183 AEVAVIAADIPEVIGTAFALNILFHIPVWAGVLMTGFSTLLLLSLQRYGVRKLELLIAIL 362
           AEVAVIAADIPEVIGTAFALNILFHIPVWAGVL TG STLL + LQRYGVRKLELLIAIL
Sbjct: 125 AEVAVIAADIPEVIGTAFALNILFHIPVWAGVLCTGVSTLLFIGLQRYGVRKLELLIAIL 184

Query: 363 VFVMAGCYFGEMSYVKPPASDLLKGMFIPKLSGHGATGDAIALLGALVMPHNLFLHSALV 542
           VFVMA C+FGEMSYVKPPA++L KGMFIPKL+G GAT DAIALLGALVMPHNLFLHSALV
Sbjct: 185 VFVMAACFFGEMSYVKPPANELFKGMFIPKLNGDGATADAIALLGALVMPHNLFLHSALV 244

Query: 543 LSRKIPSS 566
           LSRKIP+S
Sbjct: 245 LSRKIPNS 252


>gb|AAU00158.1| root-specific metal transporter [Malus baccata]
          Length = 551

 Score =  332 bits (851), Expect = 3e-89
 Identities = 168/188 (89%), Positives = 179/188 (95%)
 Frame = +3

Query: 3   LQAGANHRYELLWVILIGLIFALIIQSLAANHLGVSTGKHLAELCKAEYPILVKYCLWLL 182
           LQAGANHRYELLWVILIGLIFALIIQSL+AN LGV TGKHL+ELCKAEYP  VKYCLWLL
Sbjct: 83  LQAGANHRYELLWVILIGLIFALIIQSLSAN-LGVITGKHLSELCKAEYPPFVKYCLWLL 141

Query: 183 AEVAVIAADIPEVIGTAFALNILFHIPVWAGVLMTGFSTLLLLSLQRYGVRKLELLIAIL 362
           AEVAVIAADIPEVIGTAFALNILF+IPVW GVL+TGFSTLLLL LQ+YGVRKLE+LIA+L
Sbjct: 142 AEVAVIAADIPEVIGTAFALNILFNIPVWTGVLLTGFSTLLLLGLQKYGVRKLEMLIAVL 201

Query: 363 VFVMAGCYFGEMSYVKPPASDLLKGMFIPKLSGHGATGDAIALLGALVMPHNLFLHSALV 542
           VFVMA C+FGEMSYVKPPAS +LKGMFIPKLSG GATGDAIALLGAL+MPHNLFLHSALV
Sbjct: 202 VFVMAACFFGEMSYVKPPASGVLKGMFIPKLSGQGATGDAIALLGALIMPHNLFLHSALV 261

Query: 543 LSRKIPSS 566
           LSRKIP+S
Sbjct: 262 LSRKIPNS 269


>ref|XP_004149810.1| PREDICTED: metal transporter Nramp5-like [Cucumis sativus]
           gi|449499093|ref|XP_004160719.1| PREDICTED: metal
           transporter Nramp5-like [Cucumis sativus]
          Length = 549

 Score =  328 bits (841), Expect = 4e-88
 Identities = 166/188 (88%), Positives = 176/188 (93%)
 Frame = +3

Query: 3   LQAGANHRYELLWVILIGLIFALIIQSLAANHLGVSTGKHLAELCKAEYPILVKYCLWLL 182
           LQAGANH +ELLWV+LIGLIFALIIQSLAAN LGVSTGKHL+E+CKAEYP  VKYCLWLL
Sbjct: 77  LQAGANHGFELLWVVLIGLIFALIIQSLAAN-LGVSTGKHLSEVCKAEYPKFVKYCLWLL 135

Query: 183 AEVAVIAADIPEVIGTAFALNILFHIPVWAGVLMTGFSTLLLLSLQRYGVRKLELLIAIL 362
           AEVAVIAADIPEVIGTAFALNILFHIPVWAGVL+TG STLLLL LQRYG RKLELLIAIL
Sbjct: 136 AEVAVIAADIPEVIGTAFALNILFHIPVWAGVLLTGLSTLLLLGLQRYGARKLELLIAIL 195

Query: 363 VFVMAGCYFGEMSYVKPPASDLLKGMFIPKLSGHGATGDAIALLGALVMPHNLFLHSALV 542
           VFVMA C+FGEMSYVKPPAS +LKGMF+PKL G GAT DAIALLGALVMPHNLFLHSALV
Sbjct: 196 VFVMAACFFGEMSYVKPPASGVLKGMFVPKLKGEGATADAIALLGALVMPHNLFLHSALV 255

Query: 543 LSRKIPSS 566
           LSRK+P+S
Sbjct: 256 LSRKVPNS 263


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