BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013277
         (1521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera]   620   e-175
ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein lig...   617   e-174
emb|CBI19874.3| unnamed protein product [Vitis vinifera]              617   e-174
ref|XP_002510542.1| hypothetical protein RCOM_1598060 [Ricinus c...   604   e-170
ref|XP_003591660.1| U-box domain-containing protein [Medicago tr...   595   e-168

>emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera]
          Length = 1494

 Score =  620 bits (1600), Expect = e-175
 Identities = 318/487 (65%), Positives = 379/487 (77%), Gaps = 1/487 (0%)
 Frame = -3

Query: 1519 LTASGKSLTEARLLKSAGLDQSYNALLKAEK-QPHXXXXXXXXXXXENVARSWEKRAAFV 1343
            LT SGKS TEA LLK AG DQ Y+AL+K+E+ + +           E    SW+KR  FV
Sbjct: 1008 LTTSGKSYTEAWLLKIAGYDQPYHALMKSERLKIYENELTETTXEEEKAVTSWQKRVVFV 1067

Query: 1342 LCNHENGSIFKALEECLKSNSLEMAKSCLVIATWLTHMLTNLPDTGVRDTARNCLLDQFI 1163
            LCNHE GSIFKALEECLKSNSLE+AKSCLV+ATWLT+ML NLPDTGVR+ A    L+ FI
Sbjct: 1068 LCNHEKGSIFKALEECLKSNSLEIAKSCLVVATWLTYMLYNLPDTGVRNVAHKSFLEPFI 1127

Query: 1162 NVLQSSRNLEEKALATVALRSFIDDQDALKELGAYAKTICKSLRKLKRSSVVVTDILKAL 983
            NVLQSS+NLEEK LAT+AL  F++D  AL+ELGAYAK + K+LRKLK++SVVV+D+LKAL
Sbjct: 1128 NVLQSSKNLEEKILATLALNCFLNDPGALEELGAYAKCMYKTLRKLKKNSVVVSDMLKAL 1187

Query: 982  MNLTSINATELWSCAEVTEIDSGSNGEVLSLVHLKGRVFSSHSDGTIKVWDAGKRVLRLI 803
            + L S++ TELW C EV E+DS SNG +LSL+ LK  V S HSDGTIKVWDAGKR LRLI
Sbjct: 1188 IKLPSVDPTELWCCDEVVELDSCSNGGILSLLPLKSWVLSGHSDGTIKVWDAGKRDLRLI 1247

Query: 802  QETREHKKAVTCLSIPSSGDKLYSGSLDRTIRVWAIKSEEIHCTQVHEVKDAVHVLAANT 623
            QE REH KAVTCL   SS DKLYSGSLD+TIRVW +K EEIHC QVH+VK+AV+ L AN 
Sbjct: 1248 QEVREHTKAVTCLYASSSSDKLYSGSLDKTIRVWTVKPEEIHCVQVHDVKEAVYQLTANA 1307

Query: 622  SFACFASQGTGVKVNQHLEVPKHINFNKSVKCLTIMDKKLYCGCTGYTIQEVDLIKGTST 443
            +FACF+SQGTGV V     VPKHINFNK VKCL + + +LYCGCTGY+IQEVDL K TS 
Sbjct: 1308 NFACFSSQGTGVNVYSWSGVPKHINFNKYVKCLDMAEDRLYCGCTGYSIQEVDLCKSTSN 1367

Query: 442  TFFSGTKKLLGKQIIHSLCIRDGFLFAGGSSLDGIAGKVFSLSTGAAIRSLPTGFDINCI 263
            TF+SG +KLLGKQ I+SL I DGFL+AGGSS+DG AGKVFSLST A   S  TG DI  +
Sbjct: 1368 TFYSGARKLLGKQTIYSLRIHDGFLYAGGSSVDGTAGKVFSLSTKALTGSFLTGLDIQRL 1427

Query: 262  AVNNYFVFTGTKCGVIDVCLRERLIRVGSLRISGAGNTRVTSLTSDSDGDMLFAGSSDGK 83
            AVN+ F+FT  K G+I+V  +E + +V S++I G G+ ++ SL SD+DG+MLFAG  DGK
Sbjct: 1428 AVNSDFIFTAGKSGIIEVWFKETVTKVASIKIGGHGHAKIASLASDTDGEMLFAGFLDGK 1487

Query: 82   IQAWALD 62
            I+AWALD
Sbjct: 1488 IRAWALD 1494


>ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
            vinifera]
          Length = 1494

 Score =  617 bits (1592), Expect = e-174
 Identities = 316/487 (64%), Positives = 378/487 (77%), Gaps = 1/487 (0%)
 Frame = -3

Query: 1519 LTASGKSLTEARLLKSAGLDQSYNALLKAEK-QPHXXXXXXXXXXXENVARSWEKRAAFV 1343
            LT SGKS TEA LLK AG DQ Y+AL+K+E+ + +           E    SW+KR  FV
Sbjct: 1008 LTTSGKSYTEAWLLKIAGYDQPYHALMKSERLKIYENELTETTEEEEKAVTSWQKRVVFV 1067

Query: 1342 LCNHENGSIFKALEECLKSNSLEMAKSCLVIATWLTHMLTNLPDTGVRDTARNCLLDQFI 1163
            LCNHE GSIFKALEECLKSNSLE+AKSCLV+ATWLT+ML +LPDTGVR+ A    L+ FI
Sbjct: 1068 LCNHEKGSIFKALEECLKSNSLEIAKSCLVVATWLTYMLYHLPDTGVRNVAHKSFLEPFI 1127

Query: 1162 NVLQSSRNLEEKALATVALRSFIDDQDALKELGAYAKTICKSLRKLKRSSVVVTDILKAL 983
            NVLQSS+NLEEK LAT+AL  F++D  AL+ELGAYAK + K+LRKLK++SVVV+D+LKAL
Sbjct: 1128 NVLQSSKNLEEKILATLALNCFLNDPGALEELGAYAKCMYKTLRKLKKNSVVVSDMLKAL 1187

Query: 982  MNLTSINATELWSCAEVTEIDSGSNGEVLSLVHLKGRVFSSHSDGTIKVWDAGKRVLRLI 803
            + L S++ TELW C EV E+DS SNG +LSL+ LK  V S HSDGTIKVWDAGKR LRLI
Sbjct: 1188 IKLPSVDPTELWCCDEVVELDSCSNGGILSLLPLKSWVLSGHSDGTIKVWDAGKRDLRLI 1247

Query: 802  QETREHKKAVTCLSIPSSGDKLYSGSLDRTIRVWAIKSEEIHCTQVHEVKDAVHVLAANT 623
            QE REH KAVTCL   SS DKLYSGSLD+TIRVW +K EEIHC QVH+VK+AV+ L AN 
Sbjct: 1248 QEVREHTKAVTCLYASSSSDKLYSGSLDKTIRVWTVKPEEIHCVQVHDVKEAVYQLTANA 1307

Query: 622  SFACFASQGTGVKVNQHLEVPKHINFNKSVKCLTIMDKKLYCGCTGYTIQEVDLIKGTST 443
            SFACF+SQGTGV V     VPKHINFNK+VK L + + +LYCGCTGY+IQEVDL K T+ 
Sbjct: 1308 SFACFSSQGTGVNVYSWSGVPKHINFNKNVKSLDMAEDRLYCGCTGYSIQEVDLCKSTTN 1367

Query: 442  TFFSGTKKLLGKQIIHSLCIRDGFLFAGGSSLDGIAGKVFSLSTGAAIRSLPTGFDINCI 263
            TF+SG +KLLGKQ I+SL I DG L+AGGSS+DG AGKVFSLST A   S  TG DI  +
Sbjct: 1368 TFYSGARKLLGKQTIYSLRIHDGLLYAGGSSVDGTAGKVFSLSTKALTGSFLTGLDIQRL 1427

Query: 262  AVNNYFVFTGTKCGVIDVCLRERLIRVGSLRISGAGNTRVTSLTSDSDGDMLFAGSSDGK 83
            AVN+ F+FT +K G+I+V  +E + RV S++I G G+ ++ SL SD+DG+MLFAG  DGK
Sbjct: 1428 AVNSDFIFTASKSGIIEVWFKETVTRVASIKIGGHGHAKIASLASDTDGEMLFAGFLDGK 1487

Query: 82   IQAWALD 62
            IQAWALD
Sbjct: 1488 IQAWALD 1494


>emb|CBI19874.3| unnamed protein product [Vitis vinifera]
          Length = 1510

 Score =  617 bits (1592), Expect = e-174
 Identities = 316/487 (64%), Positives = 378/487 (77%), Gaps = 1/487 (0%)
 Frame = -3

Query: 1519 LTASGKSLTEARLLKSAGLDQSYNALLKAEK-QPHXXXXXXXXXXXENVARSWEKRAAFV 1343
            LT SGKS TEA LLK AG DQ Y+AL+K+E+ + +           E    SW+KR  FV
Sbjct: 1024 LTTSGKSYTEAWLLKIAGYDQPYHALMKSERLKIYENELTETTEEEEKAVTSWQKRVVFV 1083

Query: 1342 LCNHENGSIFKALEECLKSNSLEMAKSCLVIATWLTHMLTNLPDTGVRDTARNCLLDQFI 1163
            LCNHE GSIFKALEECLKSNSLE+AKSCLV+ATWLT+ML +LPDTGVR+ A    L+ FI
Sbjct: 1084 LCNHEKGSIFKALEECLKSNSLEIAKSCLVVATWLTYMLYHLPDTGVRNVAHKSFLEPFI 1143

Query: 1162 NVLQSSRNLEEKALATVALRSFIDDQDALKELGAYAKTICKSLRKLKRSSVVVTDILKAL 983
            NVLQSS+NLEEK LAT+AL  F++D  AL+ELGAYAK + K+LRKLK++SVVV+D+LKAL
Sbjct: 1144 NVLQSSKNLEEKILATLALNCFLNDPGALEELGAYAKCMYKTLRKLKKNSVVVSDMLKAL 1203

Query: 982  MNLTSINATELWSCAEVTEIDSGSNGEVLSLVHLKGRVFSSHSDGTIKVWDAGKRVLRLI 803
            + L S++ TELW C EV E+DS SNG +LSL+ LK  V S HSDGTIKVWDAGKR LRLI
Sbjct: 1204 IKLPSVDPTELWCCDEVVELDSCSNGGILSLLPLKSWVLSGHSDGTIKVWDAGKRDLRLI 1263

Query: 802  QETREHKKAVTCLSIPSSGDKLYSGSLDRTIRVWAIKSEEIHCTQVHEVKDAVHVLAANT 623
            QE REH KAVTCL   SS DKLYSGSLD+TIRVW +K EEIHC QVH+VK+AV+ L AN 
Sbjct: 1264 QEVREHTKAVTCLYASSSSDKLYSGSLDKTIRVWTVKPEEIHCVQVHDVKEAVYQLTANA 1323

Query: 622  SFACFASQGTGVKVNQHLEVPKHINFNKSVKCLTIMDKKLYCGCTGYTIQEVDLIKGTST 443
            SFACF+SQGTGV V     VPKHINFNK+VK L + + +LYCGCTGY+IQEVDL K T+ 
Sbjct: 1324 SFACFSSQGTGVNVYSWSGVPKHINFNKNVKSLDMAEDRLYCGCTGYSIQEVDLCKSTTN 1383

Query: 442  TFFSGTKKLLGKQIIHSLCIRDGFLFAGGSSLDGIAGKVFSLSTGAAIRSLPTGFDINCI 263
            TF+SG +KLLGKQ I+SL I DG L+AGGSS+DG AGKVFSLST A   S  TG DI  +
Sbjct: 1384 TFYSGARKLLGKQTIYSLRIHDGLLYAGGSSVDGTAGKVFSLSTKALTGSFLTGLDIQRL 1443

Query: 262  AVNNYFVFTGTKCGVIDVCLRERLIRVGSLRISGAGNTRVTSLTSDSDGDMLFAGSSDGK 83
            AVN+ F+FT +K G+I+V  +E + RV S++I G G+ ++ SL SD+DG+MLFAG  DGK
Sbjct: 1444 AVNSDFIFTASKSGIIEVWFKETVTRVASIKIGGHGHAKIASLASDTDGEMLFAGFLDGK 1503

Query: 82   IQAWALD 62
            IQAWALD
Sbjct: 1504 IQAWALD 1510


>ref|XP_002510542.1| hypothetical protein RCOM_1598060 [Ricinus communis]
            gi|223551243|gb|EEF52729.1| hypothetical protein
            RCOM_1598060 [Ricinus communis]
          Length = 1427

 Score =  604 bits (1557), Expect = e-170
 Identities = 309/491 (62%), Positives = 374/491 (76%), Gaps = 5/491 (1%)
 Frame = -3

Query: 1519 LTASGKSLTEARLLKSAGLDQSYNALLKAEK-QPHXXXXXXXXXXXENVARSWEKRAAFV 1343
            LT+SG+   EA LLK AG DQ YNAL+KAE  +             E  A SWE + AFV
Sbjct: 937  LTSSGRYYLEAWLLKIAGYDQPYNALMKAEGLKKGENDLAETMEDEEKAASSWETKVAFV 996

Query: 1342 LCNHENGSIFKALEECLKSNSLEMAKSCLVIATWLTHMLTNLPDTGVRDTARNCLLDQFI 1163
            LCNHE GSIFK LEEC KSNS+EMAKSCLVI+TWL +ML+ LPD GVR+ AR  LLD+FI
Sbjct: 997  LCNHEKGSIFKGLEECFKSNSIEMAKSCLVISTWLVYMLSVLPDIGVREVARKYLLDEFI 1056

Query: 1162 NVLQSSRNLEEKALATVALRSFIDDQDALKELGAYAKTICKSLRKLKRSSVVVTDILKAL 983
            NVLQSSRN+EEK LA +AL++F+ D  AL+EL  YAK I  +LRK KR+S V+ D+LK+L
Sbjct: 1057 NVLQSSRNIEEKILAALALKTFVIDGAALEELEKYAKCIYTTLRKFKRTSPVIADVLKSL 1116

Query: 982  MNLTSINATELWSCAEVTEIDSGSNGEVLSLVHLKGRVFSSHSDGTIKVWDAGKRVLRLI 803
            MNL S+NA +LW+C EV E++S SNGEVLSL+HL+GRV SSHSDGTIKVWDAGKRVLRLI
Sbjct: 1117 MNLASVNAVKLWNCTEVVELESSSNGEVLSLLHLRGRVISSHSDGTIKVWDAGKRVLRLI 1176

Query: 802  QETREHKKAVTCLSIPSSGDKLYSGSLDRTIRVWAIKSEEIHCTQVHEVKDAVHVLAANT 623
            QE REH KAVTC+ +PS GDKLYSGSLD+TIRVW IK EEIHC QVH+VK+AV  L AN 
Sbjct: 1177 QEVREHTKAVTCICVPSFGDKLYSGSLDKTIRVWVIKPEEIHCVQVHDVKEAVFGLTANA 1236

Query: 622  SFACFASQGTGVKVNQHL----EVPKHINFNKSVKCLTIMDKKLYCGCTGYTIQEVDLIK 455
              ACF SQGTGVK +  +     +PKH+ FNK+VK L +   KL+CGC+GY+IQEVDL K
Sbjct: 1237 KVACFTSQGTGVKASAPIYNWSGIPKHVTFNKNVKSLAMTGDKLFCGCSGYSIQEVDLRK 1296

Query: 454  GTSTTFFSGTKKLLGKQIIHSLCIRDGFLFAGGSSLDGIAGKVFSLSTGAAIRSLPTGFD 275
             TSTTF+SGT+KLLGKQ I+SL I D  LFAGGS++DG AGKVFS S  A   S  TG D
Sbjct: 1297 LTSTTFYSGTRKLLGKQNIYSLHINDDLLFAGGSAVDGAAGKVFSHSKKAVKGSFSTGLD 1356

Query: 274  INCIAVNNYFVFTGTKCGVIDVCLRERLIRVGSLRISGAGNTRVTSLTSDSDGDMLFAGS 95
            I+ I  NN F+FT TKC VI+V L+E + +V S++++G G+ ++TS+  D DG ML+ GS
Sbjct: 1357 ISHIVGNNEFIFTATKCEVIEVWLKESVTKVASIKVNGGGHAKITSVALDVDGGMLYVGS 1416

Query: 94   SDGKIQAWALD 62
            S+GKIQAWA+D
Sbjct: 1417 SNGKIQAWAMD 1427


>ref|XP_003591660.1| U-box domain-containing protein [Medicago truncatula]
            gi|358346073|ref|XP_003637097.1| U-box domain-containing
            protein [Medicago truncatula] gi|355480708|gb|AES61911.1|
            U-box domain-containing protein [Medicago truncatula]
            gi|355503032|gb|AES84235.1| U-box domain-containing
            protein [Medicago truncatula]
          Length = 1490

 Score =  595 bits (1535), Expect = e-168
 Identities = 308/487 (63%), Positives = 373/487 (76%), Gaps = 1/487 (0%)
 Frame = -3

Query: 1519 LTASGKSLTEARLLKSAGLDQSYNALLKAEKQPHXXXXXXXXXXXE-NVARSWEKRAAFV 1343
            +T+SGKS TEA LLK AG DQ YN L+KAE+  H           E N  +SW+KR A V
Sbjct: 1007 VTSSGKSYTEAGLLKIAGFDQPYNVLMKAEQLGHSDNDFMETMEDEKNAMKSWQKRVASV 1066

Query: 1342 LCNHENGSIFKALEECLKSNSLEMAKSCLVIATWLTHMLTNLPDTGVRDTARNCLLDQFI 1163
            LCNHENGSIF+ALEECLKSNSL+MAKSCLV+ATWLTHML  LPDTGVRD AR  LL+  +
Sbjct: 1067 LCNHENGSIFQALEECLKSNSLKMAKSCLVLATWLTHMLFTLPDTGVRDVARKSLLEALM 1126

Query: 1162 NVLQSSRNLEEKALATVALRSFIDDQDALKELGAYAKTICKSLRKLKRSSVVVTDILKAL 983
            NVLQSS+NLEEK LA++AL+SFI D    + L  YAK+I + LRKLK+ S V  DILKAL
Sbjct: 1127 NVLQSSKNLEEKILASLALKSFISDPTVHEVLRVYAKSIYRILRKLKKYSTVAADILKAL 1186

Query: 982  MNLTSINATELWSCAEVTEIDSGSNGEVLSLVHLKGRVFSSHSDGTIKVWDAGKRVLRLI 803
            +NL S++ TELWSC EV E+D  SNGEVLSL +L G+V S H+DGTIKVWDA KR+ R+I
Sbjct: 1187 LNLNSVDVTELWSCKEVVELDLSSNGEVLSLHYLNGQVLSGHADGTIKVWDARKRIPRVI 1246

Query: 802  QETREHKKAVTCLSIPSSGDKLYSGSLDRTIRVWAIKSEEIHCTQVHEVKDAVHVLAANT 623
            QETREHKKAVT  S+ SS DKLYS SLD+TIRVW IK + I C  V++VK+AV+ LAAN 
Sbjct: 1247 QETREHKKAVT--SLCSSVDKLYSSSLDKTIRVWTIKPDGIKCIDVYDVKEAVYELAANA 1304

Query: 622  SFACFASQGTGVKVNQHLEVPKHINFNKSVKCLTIMDKKLYCGCTGYTIQEVDLIKGTST 443
              AC+ +QGTGVKV   L+ PK INFNK VKCL +   KLYCGC+GY+IQEVDL K TST
Sbjct: 1305 KLACYVTQGTGVKVFNWLDAPKFINFNKYVKCLAVSGDKLYCGCSGYSIQEVDLSKYTST 1364

Query: 442  TFFSGTKKLLGKQIIHSLCIRDGFLFAGGSSLDGIAGKVFSLSTGAAIRSLPTGFDINCI 263
            +FF+GT+KLLGKQ IHSL I D  LFA GSS+D  AGK+FSLS+   + SL TG D++ +
Sbjct: 1365 SFFTGTRKLLGKQTIHSLQIHDDLLFACGSSIDATAGKIFSLSSKMVVGSLSTGLDVHRV 1424

Query: 262  AVNNYFVFTGTKCGVIDVCLRERLIRVGSLRISGAGNTRVTSLTSDSDGDMLFAGSSDGK 83
            A+N+ F+F GTK G I+V L+++  RV S++++G GNT++TSL SD+DG MLF GSSDGK
Sbjct: 1425 AINSDFIFAGTKFGTIEVWLKDKFTRVASIKMAG-GNTKITSLASDADGMMLFVGSSDGK 1483

Query: 82   IQAWALD 62
            IQ WALD
Sbjct: 1484 IQVWALD 1490