BLASTX nr result

ID: Coptis24_contig00013202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013202
         (976 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510363.1| conserved hypothetical protein [Ricinus comm...   314   2e-83
ref|XP_002321261.1| hypothetical protein POPTRDRAFT_573245 [Popu...   313   3e-83
ref|NP_568618.1| uncharacterized protein [Arabidopsis thaliana] ...   295   1e-77
gb|ABK28739.1| unknown [Arabidopsis thaliana]                         295   1e-77
dbj|BAB09198.1| unnamed protein product [Arabidopsis thaliana]        295   1e-77

>ref|XP_002510363.1| conserved hypothetical protein [Ricinus communis]
           gi|223551064|gb|EEF52550.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 213

 Score =  314 bits (805), Expect = 2e-83
 Identities = 149/215 (69%), Positives = 183/215 (85%)
 Frame = +1

Query: 187 MMKASVKGRYETDKNSTALANFSFNTGTDVKLKASLTDATFVNGPSLNGLILSVEKPGSF 366
           MMKAS+KGRYETDK+S A A  +FN G DVKL+AS+TDAT V GPSLNGL+L+VEKPG F
Sbjct: 1   MMKASLKGRYETDKSSAAAA-VAFNAG-DVKLRASMTDATVVKGPSLNGLVLAVEKPGFF 58

Query: 367 IVDYNVPNKDFRFQFMNNVKIADKALKLNYIHGQGDNRTMVDGTLVFDLNNKVSANYMFG 546
           +VDYNVP KDFRFQFM+ +K+ADK L L YIH +GDNRT++DG LV D  NK++AN++ G
Sbjct: 59  MVDYNVPKKDFRFQFMSTIKVADKPLNLTYIHSRGDNRTVLDGALVLDSANKLAANHILG 118

Query: 547 TGNCKLKYSYLHGGVRTFEPCYDVSKNCWDFTFSQRVYGEDLVRATYQTSSKVLGVDWSR 726
           +GNCKLKY+Y+HGGV TFEPCYD++KN WDF  S++VY +D+ RATYQTSSK LG++WSR
Sbjct: 119 SGNCKLKYTYVHGGVTTFEPCYDLAKNSWDFAVSRKVYADDVFRATYQTSSKALGLEWSR 178

Query: 727 DSKINGIFKISASVNLADEVKRPKLTAESTWNIEL 831
           +SK NG FKI+ASVNLA+E K PKL+AESTWN E+
Sbjct: 179 NSKFNGNFKIAASVNLAEESKVPKLSAESTWNFEM 213


>ref|XP_002321261.1| hypothetical protein POPTRDRAFT_573245 [Populus trichocarpa]
           gi|222862034|gb|EEE99576.1| hypothetical protein
           POPTRDRAFT_573245 [Populus trichocarpa]
          Length = 212

 Score =  313 bits (803), Expect = 3e-83
 Identities = 149/214 (69%), Positives = 182/214 (85%)
 Frame = +1

Query: 190 MKASVKGRYETDKNSTALANFSFNTGTDVKLKASLTDATFVNGPSLNGLILSVEKPGSFI 369
           MKAS+KG+Y+ DK+STA A  +FN G DVKL+AS+TDAT VNGPSLNGL L+VEKPG FI
Sbjct: 1   MKASLKGKYDNDKSSTA-ATVAFNAG-DVKLRASITDATVVNGPSLNGLALAVEKPGFFI 58

Query: 370 VDYNVPNKDFRFQFMNNVKIADKALKLNYIHGQGDNRTMVDGTLVFDLNNKVSANYMFGT 549
           +DYNVP KDFRFQFMN+VK+ DK L L YIH +GDNRT++DGTLV D  NK+SANYM GT
Sbjct: 59  IDYNVPKKDFRFQFMNSVKVVDKPLNLTYIHCRGDNRTILDGTLVVDSANKISANYMLGT 118

Query: 550 GNCKLKYSYLHGGVRTFEPCYDVSKNCWDFTFSQRVYGEDLVRATYQTSSKVLGVDWSRD 729
            NCKLKY+Y+HGG+ +FE CYD +KN WDF  S++VYG+D++RA YQTSSK LG++WSR+
Sbjct: 119 ENCKLKYTYVHGGLTSFEQCYDFAKNSWDFAGSRKVYGDDVLRAVYQTSSKNLGMEWSRN 178

Query: 730 SKINGIFKISASVNLADEVKRPKLTAESTWNIEL 831
           SK+NG FK+SAS+NLA+E K PKLTAESTWN E+
Sbjct: 179 SKLNGNFKVSASINLAEESKMPKLTAESTWNFEM 212


>ref|NP_568618.1| uncharacterized protein [Arabidopsis thaliana]
           gi|75151846|sp|Q8H0Y1.1|OP24B_ARATH RecName: Full=Outer
           envelope pore protein 24B, chloroplastic; AltName:
           Full=Chloroplastic outer envelope pore protein of 24 kDa
           B gi|24899671|gb|AAN65050.1| Unknown protein
           [Arabidopsis thaliana] gi|98961909|gb|ABF59284.1|
           unknown protein [Arabidopsis thaliana]
           gi|332007511|gb|AED94894.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 213

 Score =  295 bits (754), Expect = 1e-77
 Identities = 140/214 (65%), Positives = 177/214 (82%)
 Frame = +1

Query: 190 MKASVKGRYETDKNSTALANFSFNTGTDVKLKASLTDATFVNGPSLNGLILSVEKPGSFI 369
           MKAS+KG+Y+TDK S  + + +FN G D+KL+A++TDAT V GP+L GL L+VEKPGSFI
Sbjct: 3   MKASIKGKYDTDKTS-GIGSLAFNAG-DIKLRATMTDATLVAGPTLTGLALAVEKPGSFI 60

Query: 370 VDYNVPNKDFRFQFMNNVKIADKALKLNYIHGQGDNRTMVDGTLVFDLNNKVSANYMFGT 549
           V+YNVP KD RFQFMN V+IA+K L L YIH + DNRT+VDG+LV D  NK+SAN+M GT
Sbjct: 61  VEYNVPKKDVRFQFMNTVRIAEKPLNLTYIHSRADNRTIVDGSLVIDSANKLSANHMVGT 120

Query: 550 GNCKLKYSYLHGGVRTFEPCYDVSKNCWDFTFSQRVYGEDLVRATYQTSSKVLGVDWSRD 729
            NCK+KY+Y HGG+ TFEPCYD++KN WDF  S+R Y  D VRATYQTSSK+LG++WSR+
Sbjct: 121 NNCKIKYTYAHGGLATFEPCYDLAKNTWDFAVSRRFYSGDNVRATYQTSSKLLGMEWSRN 180

Query: 730 SKINGIFKISASVNLADEVKRPKLTAESTWNIEL 831
           +K +G FK+ ASVNLADE+K PKLTAE+TWN+E+
Sbjct: 181 NKASG-FKVCASVNLADELKTPKLTAETTWNLEM 213


>gb|ABK28739.1| unknown [Arabidopsis thaliana]
          Length = 214

 Score =  295 bits (754), Expect = 1e-77
 Identities = 140/214 (65%), Positives = 177/214 (82%)
 Frame = +1

Query: 190 MKASVKGRYETDKNSTALANFSFNTGTDVKLKASLTDATFVNGPSLNGLILSVEKPGSFI 369
           MKAS+KG+Y+TDK S  + + +FN G D+KL+A++TDAT V GP+L GL L+VEKPGSFI
Sbjct: 3   MKASIKGKYDTDKTS-GIGSLAFNAG-DIKLRATMTDATLVAGPTLTGLALAVEKPGSFI 60

Query: 370 VDYNVPNKDFRFQFMNNVKIADKALKLNYIHGQGDNRTMVDGTLVFDLNNKVSANYMFGT 549
           V+YNVP KD RFQFMN V+IA+K L L YIH + DNRT+VDG+LV D  NK+SAN+M GT
Sbjct: 61  VEYNVPKKDVRFQFMNTVRIAEKPLNLTYIHSRADNRTIVDGSLVIDSANKLSANHMVGT 120

Query: 550 GNCKLKYSYLHGGVRTFEPCYDVSKNCWDFTFSQRVYGEDLVRATYQTSSKVLGVDWSRD 729
            NCK+KY+Y HGG+ TFEPCYD++KN WDF  S+R Y  D VRATYQTSSK+LG++WSR+
Sbjct: 121 NNCKIKYTYAHGGLATFEPCYDLAKNTWDFAVSRRFYSGDNVRATYQTSSKLLGMEWSRN 180

Query: 730 SKINGIFKISASVNLADEVKRPKLTAESTWNIEL 831
           +K +G FK+ ASVNLADE+K PKLTAE+TWN+E+
Sbjct: 181 NKASG-FKVCASVNLADELKTPKLTAETTWNLEM 213


>dbj|BAB09198.1| unnamed protein product [Arabidopsis thaliana]
          Length = 211

 Score =  295 bits (754), Expect = 1e-77
 Identities = 140/214 (65%), Positives = 177/214 (82%)
 Frame = +1

Query: 190 MKASVKGRYETDKNSTALANFSFNTGTDVKLKASLTDATFVNGPSLNGLILSVEKPGSFI 369
           MKAS+KG+Y+TDK S  + + +FN G D+KL+A++TDAT V GP+L GL L+VEKPGSFI
Sbjct: 1   MKASIKGKYDTDKTS-GIGSLAFNAG-DIKLRATMTDATLVAGPTLTGLALAVEKPGSFI 58

Query: 370 VDYNVPNKDFRFQFMNNVKIADKALKLNYIHGQGDNRTMVDGTLVFDLNNKVSANYMFGT 549
           V+YNVP KD RFQFMN V+IA+K L L YIH + DNRT+VDG+LV D  NK+SAN+M GT
Sbjct: 59  VEYNVPKKDVRFQFMNTVRIAEKPLNLTYIHSRADNRTIVDGSLVIDSANKLSANHMVGT 118

Query: 550 GNCKLKYSYLHGGVRTFEPCYDVSKNCWDFTFSQRVYGEDLVRATYQTSSKVLGVDWSRD 729
            NCK+KY+Y HGG+ TFEPCYD++KN WDF  S+R Y  D VRATYQTSSK+LG++WSR+
Sbjct: 119 NNCKIKYTYAHGGLATFEPCYDLAKNTWDFAVSRRFYSGDNVRATYQTSSKLLGMEWSRN 178

Query: 730 SKINGIFKISASVNLADEVKRPKLTAESTWNIEL 831
           +K +G FK+ ASVNLADE+K PKLTAE+TWN+E+
Sbjct: 179 NKASG-FKVCASVNLADELKTPKLTAETTWNLEM 211


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